RNA–Protein interactions for RNA: ENST00000486930.5

RPL13A-211, Transcript of ribosomal protein L13a, humanhuman

TSL 3

Gene RPL13A, Length 652 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL13A-211ENST00000486930 NISCHQ9Y2I1 1504 aa38.57■■■■□ 3.76
RPL13A-211ENST00000486930 CCDC180Q9P1Z9 1646 aa34.43■■■■□ 3.1
RPL13A-211ENST00000486930 ABCC9O60706 1549 aa34.25■■■■□ 3.07
RPL13A-211ENST00000486930 RB1CC1Q8TDY2 1594 aa32.69■■■□□ 2.82
RPL13A-211ENST00000486930 NACADO15069 1562 aa32.54■■■□□ 2.8
RPL13A-211ENST00000486930 DCAF8L2P0C7V8 631 aa32.53■■■□□ 2.8
RPL13A-211ENST00000486930 MYO15BQ96JP2 1530 aa32.19■■■□□ 2.74
RPL13A-211ENST00000486930 PABPN1Q86U42 306 aaKnown RBP eCLIP32■■■□□ 2.714e-6■□□□□ 9.3
RPL13A-211ENST00000486930 DNAJC5BQ9UF47 199 aa32■■■□□ 2.71
RPL13A-211ENST00000486930 ZCCHC6Q5VYS8 1495 aaKnown RBP31.99■■■□□ 2.71
RPL13A-211ENST00000486930 UNC13AQ9UPW8 1703 aa31.93■■■□□ 2.7
RPL13A-211ENST00000486930 DCAF1Q9Y4B6 1507 aa31.87■■■□□ 2.69
RPL13A-211ENST00000486930 BICRAQ9NZM4 1560 aa31.74■■■□□ 2.67
RPL13A-211ENST00000486930 SCRIBQ14160 1630 aa31.4■■■□□ 2.62
RPL13A-211ENST00000486930 SHROOM4Q9ULL8 1493 aa31.31■■■□□ 2.6
RPL13A-211ENST00000486930 CC2D2AQ9P2K1 1620 aa30.94■■■□□ 2.54
RPL13A-211ENST00000486930 EIF4G1Q04637 1599 aaKnown RBP30.93■■■□□ 2.54
RPL13A-211ENST00000486930 CECR2Q9BXF3 1484 aa30.83■■■□□ 2.53
RPL13A-211ENST00000486930 NCAPD3P42695 1498 aa30.08■■■□□ 2.41
RPL13A-211ENST00000486930 ATAD2BQ9ULI0 1458 aa30.01■■■□□ 2.4
RPL13A-211ENST00000486930 SMARCA4P51532 1647 aa30■■■□□ 2.39
RPL13A-211ENST00000486930 SMARCA2P51531 1590 aa29.9■■■□□ 2.38
RPL13A-211ENST00000486930 BAZ1AQ9NRL2 1556 aaPredicted RBP29.9■■■□□ 2.38
RPL13A-211ENST00000486930 HMGXB3Q12766 1538 aa29.81■■■□□ 2.36
RPL13A-211ENST00000486930 MROH2BQ7Z745 1585 aa29.72■■■□□ 2.35
RPL13A-211ENST00000486930 PEG3Q9GZU2 1588 aa29.72■■■□□ 2.35
RPL13A-211ENST00000486930 BAZ1BQ9UIG0 1483 aaKnown RBP29.7■■■□□ 2.35
RPL13A-211ENST00000486930 ERCC6Q03468 1493 aa29.54■■■□□ 2.32
RPL13A-211ENST00000486930 NESP48681 1621 aa29.5■■■□□ 2.31
RPL13A-211ENST00000486930 CUX2O14529 1486 aa29.41■■■□□ 2.3
RPL13A-211ENST00000486930 WIZO95785 1651 aa29.36■■■□□ 2.29
RPL13A-211ENST00000486930 LAMC3Q9Y6N6 1575 aa29.3■■■□□ 2.28
RPL13A-211ENST00000486930 RSF1Q96T23 1441 aaPredicted RBP29.23■■■□□ 2.27
RPL13A-211ENST00000486930 CADPSQ9ULU8 1353 aa29.19■■■□□ 2.26
RPL13A-211ENST00000486930 DNAJC5Q9H3Z4 198 aa29.19■■■□□ 2.26
RPL13A-211ENST00000486930 PDS5BQ9NTI5 1447 aa29.18■■■□□ 2.26
RPL13A-211ENST00000486930 THOC2Q8NI27 1593 aaKnown RBP29.09■■■□□ 2.25
RPL13A-211ENST00000486930 KIF21AQ7Z4S6 1674 aa29.08■■■□□ 2.25
RPL13A-211ENST00000486930 TOP2AP11388 1531 aaKnown RBP28.99■■■□□ 2.23
RPL13A-211ENST00000486930 CFTRP13569 1480 aa28.89■■■□□ 2.22
RPL13A-211ENST00000486930 MRC2Q9UBG0 1479 aa28.87■■■□□ 2.21
RPL13A-211ENST00000486930 FANCD2Q9BXW9 1451 aa28.82■■■□□ 2.2
RPL13A-211ENST00000486930 CEP164Q9UPV0 1460 aa28.8■■■□□ 2.2
RPL13A-211ENST00000486930 WDR62O43379 1518 aa28.78■■■□□ 2.2
RPL13A-211ENST00000486930 CCDC88BA6NC98 1476 aa28.72■■■□□ 2.19
RPL13A-211ENST00000486930 URB2Q14146 1524 aaKnown RBP28.56■■■□□ 2.16
RPL13A-211ENST00000486930 PRDM2Q13029 1718 aa28.53■■■□□ 2.16
RPL13A-211ENST00000486930 TOPBP1Q92547 1522 aa28.29■■■□□ 2.12
RPL13A-211ENST00000486930 ABCC8Q09428 1581 aa28.27■■■□□ 2.12
RPL13A-211ENST00000486930 IFT140Q96RY7 1462 aa28.24■■■□□ 2.11
RPL13A-211ENST00000486930 OSCARQ8IYS5 282 aa28.19■■■□□ 2.1
RPL13A-211ENST00000486930 DNMBPQ6XZF7 1577 aa28.19■■■□□ 2.1
RPL13A-211ENST00000486930 ZNF608Q9ULD9 1512 aaPredicted RBP28.18■■■□□ 2.1
RPL13A-211ENST00000486930 SUPT5HO00267 1087 aaKnown RBP28.16■■■□□ 2.1
RPL13A-211ENST00000486930 POLA1P09884 1462 aaPredicted RBP28.02■■■□□ 2.08
RPL13A-211ENST00000486930 TARBP1Q13395 1621 aaKnown RBP28.02■■■□□ 2.08
RPL13A-211ENST00000486930 TRIM41Q8WV44 630 aa27.99■■■□□ 2.07
RPL13A-211ENST00000486930 AQRO60306 1485 aaKnown RBP eCLIP27.98■■■□□ 2.074e-24■■■■■ 34
RPL13A-211ENST00000486930 EIF4G3O43432 1585 aaKnown RBP27.97■■■□□ 2.07
RPL13A-211ENST00000486930 SOGA1O94964 1423 aa27.94■■■□□ 2.06
RPL13A-211ENST00000486930 RAD54L2Q9Y4B4 1467 aa27.94■■■□□ 2.06
RPL13A-211ENST00000486930 CUX1P39880 1505 aa27.9■■■□□ 2.06
RPL13A-211ENST00000486930 FGD5Q6ZNL6 1462 aa27.88■■■□□ 2.05
RPL13A-211ENST00000486930 TDRD9Q8NDG6 1382 aaKnown RBP27.86■■■□□ 2.05
RPL13A-211ENST00000486930 FBLN2P98095 1184 aa27.77■■■□□ 2.04
RPL13A-211ENST00000486930 WDR97A6NE52 1622 aa27.72■■■□□ 2.03
RPL13A-211ENST00000486930 CHD1O14646 1710 aa27.72■■■□□ 2.03
RPL13A-211ENST00000486930 RIMBP3CA6NJZ7 1639 aa27.7■■■□□ 2.02
RPL13A-211ENST00000486930 RIMBP3BA6NNM3 1639 aa27.7■■■□□ 2.02
RPL13A-211ENST00000486930 RIMBP3Q9UFD9 1639 aa27.7■■■□□ 2.02
RPL13A-211ENST00000486930 SNAPC4Q5SXM2 1469 aa27.65■■■□□ 2.02
RPL13A-211ENST00000486930 ARHGEF11O15085 1522 aa27.65■■■□□ 2.02
RPL13A-211ENST00000486930 GRIN2BQ13224 1484 aa27.64■■■□□ 2.01
RPL13A-211ENST00000486930 CHMP7Q8WUX9 453 aaPredicted RBP27.61■■■□□ 2.01
RPL13A-211ENST00000486930 MAGI1Q96QZ7 1491 aaPredicted RBP27.59■■■□□ 2.01
RPL13A-211ENST00000486930 ABCA10Q8WWZ4 1543 aa27.59■■■□□ 2.01
RPL13A-211ENST00000486930 GAPVD1Q14C86 1478 aa27.58■■■□□ 2.01
RPL13A-211ENST00000486930 WRNQ14191 1432 aaPredicted RBP eCLIP27.55■■■□□ 2
RPL13A-211ENST00000486930 CYB5RLQ6IPT4 315 aa27.52■■■□□ 2
RPL13A-211ENST00000486930 TOP2BQ02880 1626 aa27.51■■□□□ 1.99
RPL13A-211ENST00000486930 SYNJ2O15056 1496 aa27.51■■□□□ 1.99
RPL13A-211ENST00000486930 BIVM-ERCC5R4GMW8 1640 aa27.49■■□□□ 1.99
RPL13A-211ENST00000486930 PBRM1Q86U86 1689 aa27.49■■□□□ 1.99
RPL13A-211ENST00000486930 ABCA5Q8WWZ7 1642 aa27.49■■□□□ 1.99
RPL13A-211ENST00000486930 SYNJ1O43426 1573 aa27.48■■□□□ 1.99
RPL13A-211ENST00000486930 CLASP1Q7Z460 1538 aa27.43■■□□□ 1.98
RPL13A-211ENST00000486930 ARAP1Q96P48 1450 aa27.39■■□□□ 1.98
RPL13A-211ENST00000486930 GRIN2AQ12879 1464 aa27.27■■□□□ 1.96
RPL13A-211ENST00000486930 FHAD1B1AJZ9 1412 aa27.24■■□□□ 1.95
RPL13A-211ENST00000486930 ADAMTS12P58397 1594 aa27.24■■□□□ 1.95
RPL13A-211ENST00000486930 ERICH3Q5RHP9 1530 aa27.24■■□□□ 1.95
RPL13A-211ENST00000486930 NUP160Q12769 1436 aa27.18■■□□□ 1.94
RPL13A-211ENST00000486930 CEP170Q5SW79 1584 aa27.14■■□□□ 1.94
RPL13A-211ENST00000486930 TRHP20396 242 aaPredicted RBP27.11■■□□□ 1.93
RPL13A-211ENST00000486930 ERCC6L2Q5T890 1561 aa27.05■■□□□ 1.92
RPL13A-211ENST00000486930 IGF1RP08069 1367 aa27.03■■□□□ 1.92
RPL13A-211ENST00000486930 KIF27Q86VH2 1401 aa27.01■■□□□ 1.91
RPL13A-211ENST00000486930 SHROOM2Q13796 1616 aa27■■□□□ 1.91
RPL13A-211ENST00000486930 JPH4Q96JJ6 628 aa26.98■■□□□ 1.91
RPL13A-211ENST00000486930 PRG4Q92954 1404 aaPredicted RBP26.92■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms