RNA–Protein interactions for RNA: ENST00000610196.1

PCMTD2-211, Transcript of protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 2, humanhuman

TSL 3

Gene PCMTD2, Length 476 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCMTD2-211ENST00000610196 NISCHQ9Y2I1 1504 aa46.12■■■■■ 4.97
PCMTD2-211ENST00000610196 CCDC180Q9P1Z9 1646 aa41.58■■■■■ 4.25
PCMTD2-211ENST00000610196 ABCC9O60706 1549 aa41.41■■■■■ 4.22
PCMTD2-211ENST00000610196 RB1CC1Q8TDY2 1594 aa39.47■■■■□ 3.91
PCMTD2-211ENST00000610196 NACADO15069 1562 aa39.21■■■■□ 3.87
PCMTD2-211ENST00000610196 DNAJC5BQ9UF47 199 aa38.95■■■■□ 3.83
PCMTD2-211ENST00000610196 UNC13AQ9UPW8 1703 aa38.79■■■■□ 3.8
PCMTD2-211ENST00000610196 MYO15BQ96JP2 1530 aa38.74■■■■□ 3.79
PCMTD2-211ENST00000610196 DCAF8L2P0C7V8 631 aa38.49■■■■□ 3.75
PCMTD2-211ENST00000610196 BICRAQ9NZM4 1560 aa38.47■■■■□ 3.75
PCMTD2-211ENST00000610196 PABPN1Q86U42 306 aaKnown RBP eCLIP38.4■■■■□ 3.74
PCMTD2-211ENST00000610196 ZCCHC6Q5VYS8 1495 aaKnown RBP38.27■■■■□ 3.72
PCMTD2-211ENST00000610196 DCAF1Q9Y4B6 1507 aa38.19■■■■□ 3.7
PCMTD2-211ENST00000610196 SHROOM4Q9ULL8 1493 aa37.93■■■■□ 3.66
PCMTD2-211ENST00000610196 SCRIBQ14160 1630 aa37.7■■■■□ 3.63
PCMTD2-211ENST00000610196 CC2D2AQ9P2K1 1620 aa37.53■■■■□ 3.6
PCMTD2-211ENST00000610196 EIF4G1Q04637 1599 aaKnown RBP37.44■■■■□ 3.58
PCMTD2-211ENST00000610196 CECR2Q9BXF3 1484 aa37.34■■■■□ 3.57
PCMTD2-211ENST00000610196 NCAPD3P42695 1498 aa36.18■■■■□ 3.38
PCMTD2-211ENST00000610196 SMARCA4P51532 1647 aa36.05■■■■□ 3.36
PCMTD2-211ENST00000610196 ATAD2BQ9ULI0 1458 aa36.05■■■■□ 3.36
PCMTD2-211ENST00000610196 HMGXB3Q12766 1538 aa35.98■■■■□ 3.35
PCMTD2-211ENST00000610196 SMARCA2P51531 1590 aa35.94■■■■□ 3.34
PCMTD2-211ENST00000610196 CUX2O14529 1486 aa35.84■■■■□ 3.33
PCMTD2-211ENST00000610196 DNAJC5Q9H3Z4 198 aa35.81■■■■□ 3.32
PCMTD2-211ENST00000610196 BAZ1AQ9NRL2 1556 aaPredicted RBP35.8■■■■□ 3.32
PCMTD2-211ENST00000610196 PEG3Q9GZU2 1588 aa35.79■■■■□ 3.32
PCMTD2-211ENST00000610196 ERCC6Q03468 1493 aa35.69■■■■□ 3.3
PCMTD2-211ENST00000610196 BAZ1BQ9UIG0 1483 aaKnown RBP35.62■■■■□ 3.29
PCMTD2-211ENST00000610196 NESP48681 1621 aa35.61■■■■□ 3.29
PCMTD2-211ENST00000610196 MROH2BQ7Z745 1585 aa35.53■■■■□ 3.28
PCMTD2-211ENST00000610196 THOC2Q8NI27 1593 aaKnown RBP35.43■■■■□ 3.26
PCMTD2-211ENST00000610196 LAMC3Q9Y6N6 1575 aa35.41■■■■□ 3.26
PCMTD2-211ENST00000610196 KIF21AQ7Z4S6 1674 aa35.27■■■■□ 3.24
PCMTD2-211ENST00000610196 WIZO95785 1651 aa35.11■■■■□ 3.21
PCMTD2-211ENST00000610196 PDS5BQ9NTI5 1447 aa35.06■■■■□ 3.2
PCMTD2-211ENST00000610196 CADPSQ9ULU8 1353 aa34.99■■■■□ 3.19
PCMTD2-211ENST00000610196 WDR62O43379 1518 aa34.87■■■■□ 3.17
PCMTD2-211ENST00000610196 MRC2Q9UBG0 1479 aa34.85■■■■□ 3.17
PCMTD2-211ENST00000610196 RSF1Q96T23 1441 aaPredicted RBP34.71■■■■□ 3.15
PCMTD2-211ENST00000610196 TOP2AP11388 1531 aaKnown RBP34.67■■■■□ 3.14
PCMTD2-211ENST00000610196 CFTRP13569 1480 aa34.66■■■■□ 3.14
PCMTD2-211ENST00000610196 CEP164Q9UPV0 1460 aa34.66■■■■□ 3.14
PCMTD2-211ENST00000610196 FANCD2Q9BXW9 1451 aa34.61■■■■□ 3.13
PCMTD2-211ENST00000610196 PRDM2Q13029 1718 aa34.49■■■■□ 3.11
PCMTD2-211ENST00000610196 URB2Q14146 1524 aaKnown RBP34.41■■■■□ 3.1
PCMTD2-211ENST00000610196 CCDC88BA6NC98 1476 aa34.2■■■■□ 3.07
PCMTD2-211ENST00000610196 TOPBP1Q92547 1522 aa33.99■■■■□ 3.03
PCMTD2-211ENST00000610196 TRIM41Q8WV44 630 aa33.99■■■■□ 3.03
PCMTD2-211ENST00000610196 IFT140Q96RY7 1462 aa33.98■■■■□ 3.03
PCMTD2-211ENST00000610196 ZNF608Q9ULD9 1512 aaPredicted RBP33.96■■■■□ 3.03
PCMTD2-211ENST00000610196 OSCARQ8IYS5 282 aa33.95■■■■□ 3.03
PCMTD2-211ENST00000610196 DNMBPQ6XZF7 1577 aa33.89■■■■□ 3.02
PCMTD2-211ENST00000610196 ABCC8Q09428 1581 aa33.86■■■■□ 3.01
PCMTD2-211ENST00000610196 EIF4G3O43432 1585 aaKnown RBP33.85■■■■□ 3.01
PCMTD2-211ENST00000610196 TARBP1Q13395 1621 aaKnown RBP33.8■■■■□ 3
PCMTD2-211ENST00000610196 RIMBP3CA6NJZ7 1639 aa33.78■■■■□ 3
PCMTD2-211ENST00000610196 RIMBP3BA6NNM3 1639 aa33.78■■■■□ 3
PCMTD2-211ENST00000610196 RIMBP3Q9UFD9 1639 aa33.78■■■■□ 3
PCMTD2-211ENST00000610196 POLA1P09884 1462 aaPredicted RBP33.65■■■□□ 2.98
PCMTD2-211ENST00000610196 CHD1O14646 1710 aa33.64■■■□□ 2.98
PCMTD2-211ENST00000610196 ARHGEF11O15085 1522 aa33.63■■■□□ 2.97
PCMTD2-211ENST00000610196 AQRO60306 1485 aaKnown RBP eCLIP33.56■■■□□ 2.96
PCMTD2-211ENST00000610196 WDR97A6NE52 1622 aa33.46■■■□□ 2.95
PCMTD2-211ENST00000610196 RAD54L2Q9Y4B4 1467 aa33.45■■■□□ 2.95
PCMTD2-211ENST00000610196 CUX1P39880 1505 aa33.4■■■□□ 2.94
PCMTD2-211ENST00000610196 FGD5Q6ZNL6 1462 aa33.39■■■□□ 2.94
PCMTD2-211ENST00000610196 SOGA1O94964 1423 aa33.36■■■□□ 2.93
PCMTD2-211ENST00000610196 ARAP1Q96P48 1450 aa33.31■■■□□ 2.92
PCMTD2-211ENST00000610196 TDRD9Q8NDG6 1382 aaKnown RBP33.29■■■□□ 2.92
PCMTD2-211ENST00000610196 SNAPC4Q5SXM2 1469 aa33.27■■■□□ 2.92
PCMTD2-211ENST00000610196 CLASP1Q7Z460 1538 aa33.27■■■□□ 2.92
PCMTD2-211ENST00000610196 MAGI1Q96QZ7 1491 aaPredicted RBP33.22■■■□□ 2.91
PCMTD2-211ENST00000610196 PBRM1Q86U86 1689 aa33.17■■■□□ 2.9
PCMTD2-211ENST00000610196 GRIN2BQ13224 1484 aa33.16■■■□□ 2.9
PCMTD2-211ENST00000610196 CYB5RLQ6IPT4 315 aa33.12■■■□□ 2.89
PCMTD2-211ENST00000610196 SYNJ1O43426 1573 aa33.12■■■□□ 2.89
PCMTD2-211ENST00000610196 ABCA5Q8WWZ7 1642 aa33.11■■■□□ 2.89
PCMTD2-211ENST00000610196 FBLN2P98095 1184 aa33.11■■■□□ 2.89
PCMTD2-211ENST00000610196 SYNJ2O15056 1496 aa33.09■■■□□ 2.89
PCMTD2-211ENST00000610196 ABCA10Q8WWZ4 1543 aa33.05■■■□□ 2.88
PCMTD2-211ENST00000610196 GAPVD1Q14C86 1478 aa33.01■■■□□ 2.88
PCMTD2-211ENST00000610196 CHMP7Q8WUX9 453 aaPredicted RBP32.93■■■□□ 2.86
PCMTD2-211ENST00000610196 BIVM-ERCC5R4GMW8 1640 aa32.92■■■□□ 2.86
PCMTD2-211ENST00000610196 TOP2BQ02880 1626 aa32.86■■■□□ 2.85
PCMTD2-211ENST00000610196 ADAMTS12P58397 1594 aa32.83■■■□□ 2.85
PCMTD2-211ENST00000610196 WRNQ14191 1432 aaPredicted RBP eCLIP32.77■■■□□ 2.84
PCMTD2-211ENST00000610196 GRIN2AQ12879 1464 aa32.77■■■□□ 2.84
PCMTD2-211ENST00000610196 SUPT5HO00267 1087 aaKnown RBP32.76■■■□□ 2.83
PCMTD2-211ENST00000610196 CEP170Q5SW79 1584 aa32.72■■■□□ 2.83
PCMTD2-211ENST00000610196 NUP160Q12769 1436 aa32.71■■■□□ 2.83
PCMTD2-211ENST00000610196 ERCC6L2Q5T890 1561 aa32.69■■■□□ 2.82
PCMTD2-211ENST00000610196 TRHP20396 242 aaPredicted RBP32.68■■■□□ 2.82
PCMTD2-211ENST00000610196 SHROOM2Q13796 1616 aa32.68■■■□□ 2.82
PCMTD2-211ENST00000610196 ERICH3Q5RHP9 1530 aa32.64■■■□□ 2.82
PCMTD2-211ENST00000610196 FHAD1B1AJZ9 1412 aa32.6■■■□□ 2.81
PCMTD2-211ENST00000610196 RUSC2Q8N2Y8 1516 aa32.39■■■□□ 2.78
PCMTD2-211ENST00000610196 KIF13AQ9H1H9 1805 aa32.29■■■□□ 2.76
PCMTD2-211ENST00000610196 PRG4Q92954 1404 aaPredicted RBP32.26■■■□□ 2.75
PCMTD2-211ENST00000610196 CUL7Q14999 1698 aa32.17■■■□□ 2.74
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms