RNA–Protein interactions for RNA: ENST00000541372.1

SLC3A2-216, Transcript of solute carrier family 3 member 2, humanhuman

TSL 5

Gene SLC3A2, Length 269 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC3A2-216ENST00000541372 NISCHQ9Y2I1 1504 aa37.19■■■■□ 3.54
SLC3A2-216ENST00000541372 CCDC180Q9P1Z9 1646 aa32.85■■■□□ 2.85
SLC3A2-216ENST00000541372 ABCC9O60706 1549 aa32.33■■■□□ 2.77
SLC3A2-216ENST00000541372 DCAF8L2P0C7V8 631 aa31.27■■■□□ 2.6
SLC3A2-216ENST00000541372 NACADO15069 1562 aa31.03■■■□□ 2.56
SLC3A2-216ENST00000541372 RB1CC1Q8TDY2 1594 aa31.03■■■□□ 2.56
SLC3A2-216ENST00000541372 ZCCHC6Q5VYS8 1495 aaKnown RBP30.93■■■□□ 2.54
SLC3A2-216ENST00000541372 MYO15BQ96JP2 1530 aa30.87■■■□□ 2.53
SLC3A2-216ENST00000541372 DCAF1Q9Y4B6 1507 aa30.74■■■□□ 2.51
SLC3A2-216ENST00000541372 PABPN1Q86U42 306 aaKnown RBP eCLIP30.36■■■□□ 2.45
SLC3A2-216ENST00000541372 UNC13AQ9UPW8 1703 aa30.15■■■□□ 2.42
SLC3A2-216ENST00000541372 BICRAQ9NZM4 1560 aa30.1■■■□□ 2.41
SLC3A2-216ENST00000541372 SCRIBQ14160 1630 aa30.06■■■□□ 2.4
SLC3A2-216ENST00000541372 DNAJC5BQ9UF47 199 aa29.84■■■□□ 2.37
SLC3A2-216ENST00000541372 SHROOM4Q9ULL8 1493 aa29.77■■■□□ 2.36
SLC3A2-216ENST00000541372 EIF4G1Q04637 1599 aaKnown RBP29.3■■■□□ 2.28
SLC3A2-216ENST00000541372 CC2D2AQ9P2K1 1620 aa29.17■■■□□ 2.26
SLC3A2-216ENST00000541372 CECR2Q9BXF3 1484 aa29.06■■■□□ 2.24
SLC3A2-216ENST00000541372 BAZ1AQ9NRL2 1556 aaPredicted RBP28.77■■■□□ 2.2
SLC3A2-216ENST00000541372 SMARCA4P51532 1647 aa28.76■■■□□ 2.19
SLC3A2-216ENST00000541372 NCAPD3P42695 1498 aa28.73■■■□□ 2.19
SLC3A2-216ENST00000541372 ATAD2BQ9ULI0 1458 aa28.72■■■□□ 2.19
SLC3A2-216ENST00000541372 MROH2BQ7Z745 1585 aa28.67■■■□□ 2.18
SLC3A2-216ENST00000541372 SMARCA2P51531 1590 aa28.61■■■□□ 2.17
SLC3A2-216ENST00000541372 PEG3Q9GZU2 1588 aa28.5■■■□□ 2.15
SLC3A2-216ENST00000541372 HMGXB3Q12766 1538 aa28.44■■■□□ 2.14
SLC3A2-216ENST00000541372 BAZ1BQ9UIG0 1483 aaKnown RBP28.43■■■□□ 2.14
SLC3A2-216ENST00000541372 RSF1Q96T23 1441 aaPredicted RBP28.42■■■□□ 2.14
SLC3A2-216ENST00000541372 WIZO95785 1651 aa28.27■■■□□ 2.12
SLC3A2-216ENST00000541372 TOP2AP11388 1531 aaKnown RBP27.99■■■□□ 2.07
SLC3A2-216ENST00000541372 NESP48681 1621 aa27.98■■■□□ 2.07
SLC3A2-216ENST00000541372 CADPSQ9ULU8 1353 aa27.93■■■□□ 2.06
SLC3A2-216ENST00000541372 ERCC6Q03468 1493 aa27.84■■■□□ 2.05
SLC3A2-216ENST00000541372 LAMC3Q9Y6N6 1575 aa27.83■■■□□ 2.05
SLC3A2-216ENST00000541372 SUPT5HO00267 1087 aaKnown RBP27.8■■■□□ 2.04
SLC3A2-216ENST00000541372 CCDC88BA6NC98 1476 aa27.77■■■□□ 2.04
SLC3A2-216ENST00000541372 PDS5BQ9NTI5 1447 aa27.77■■■□□ 2.04
SLC3A2-216ENST00000541372 CFTRP13569 1480 aa27.71■■■□□ 2.03
SLC3A2-216ENST00000541372 CUX2O14529 1486 aa27.53■■■□□ 2
SLC3A2-216ENST00000541372 FANCD2Q9BXW9 1451 aa27.53■■■□□ 2
SLC3A2-216ENST00000541372 KIF21AQ7Z4S6 1674 aa27.46■■□□□ 1.99
SLC3A2-216ENST00000541372 CEP164Q9UPV0 1460 aa27.44■■□□□ 1.98
SLC3A2-216ENST00000541372 MRC2Q9UBG0 1479 aa27.42■■□□□ 1.98
SLC3A2-216ENST00000541372 THOC2Q8NI27 1593 aaKnown RBP27.41■■□□□ 1.98
SLC3A2-216ENST00000541372 WDR62O43379 1518 aa27.28■■□□□ 1.96
SLC3A2-216ENST00000541372 URB2Q14146 1524 aaKnown RBP27.23■■□□□ 1.95
SLC3A2-216ENST00000541372 PRDM2Q13029 1718 aa27.18■■□□□ 1.94
SLC3A2-216ENST00000541372 ABCC8Q09428 1581 aa27.09■■□□□ 1.93
SLC3A2-216ENST00000541372 TOPBP1Q92547 1522 aa27.07■■□□□ 1.92
SLC3A2-216ENST00000541372 DNMBPQ6XZF7 1577 aa26.97■■□□□ 1.91
SLC3A2-216ENST00000541372 IFT140Q96RY7 1462 aa26.92■■□□□ 1.9
SLC3A2-216ENST00000541372 CUX1P39880 1505 aa26.87■■□□□ 1.89
SLC3A2-216ENST00000541372 DNAJC5Q9H3Z4 198 aa26.85■■□□□ 1.89
SLC3A2-216ENST00000541372 POLA1P09884 1462 aaPredicted RBP26.84■■□□□ 1.89
SLC3A2-216ENST00000541372 SOGA1O94964 1423 aa26.83■■□□□ 1.89
SLC3A2-216ENST00000541372 ZNF608Q9ULD9 1512 aaPredicted RBP26.8■■□□□ 1.88
SLC3A2-216ENST00000541372 RAD54L2Q9Y4B4 1467 aa26.78■■□□□ 1.88
SLC3A2-216ENST00000541372 FGD5Q6ZNL6 1462 aa26.77■■□□□ 1.88
SLC3A2-216ENST00000541372 WRNQ14191 1432 aaPredicted RBP eCLIP26.75■■□□□ 1.87
SLC3A2-216ENST00000541372 AQRO60306 1485 aaKnown RBP eCLIP26.71■■□□□ 1.87
SLC3A2-216ENST00000541372 TARBP1Q13395 1621 aaKnown RBP26.71■■□□□ 1.87
SLC3A2-216ENST00000541372 TDRD9Q8NDG6 1382 aaKnown RBP26.7■■□□□ 1.86
SLC3A2-216ENST00000541372 TOP2BQ02880 1626 aa26.59■■□□□ 1.85
SLC3A2-216ENST00000541372 SYNJ1O43426 1573 aa26.58■■□□□ 1.85
SLC3A2-216ENST00000541372 OSCARQ8IYS5 282 aa26.58■■□□□ 1.85
SLC3A2-216ENST00000541372 EIF4G3O43432 1585 aaKnown RBP26.54■■□□□ 1.84
SLC3A2-216ENST00000541372 ABCA10Q8WWZ4 1543 aa26.53■■□□□ 1.84
SLC3A2-216ENST00000541372 BIVM-ERCC5R4GMW8 1640 aa26.53■■□□□ 1.84
SLC3A2-216ENST00000541372 GAPVD1Q14C86 1478 aa26.46■■□□□ 1.83
SLC3A2-216ENST00000541372 WDR97A6NE52 1622 aa26.46■■□□□ 1.83
SLC3A2-216ENST00000541372 FBLN2P98095 1184 aa26.45■■□□□ 1.82
SLC3A2-216ENST00000541372 GRIN2BQ13224 1484 aa26.44■■□□□ 1.82
SLC3A2-216ENST00000541372 CHMP7Q8WUX9 453 aaPredicted RBP26.38■■□□□ 1.81
SLC3A2-216ENST00000541372 SNAPC4Q5SXM2 1469 aa26.37■■□□□ 1.81
SLC3A2-216ENST00000541372 MAGI1Q96QZ7 1491 aaPredicted RBP26.33■■□□□ 1.81
SLC3A2-216ENST00000541372 ABCA5Q8WWZ7 1642 aa26.32■■□□□ 1.8
SLC3A2-216ENST00000541372 TRIM41Q8WV44 630 aa26.27■■□□□ 1.8
SLC3A2-216ENST00000541372 SYNJ2O15056 1496 aa26.25■■□□□ 1.79
SLC3A2-216ENST00000541372 KIF27Q86VH2 1401 aa26.21■■□□□ 1.79
SLC3A2-216ENST00000541372 IGF1RP08069 1367 aa26.2■■□□□ 1.78
SLC3A2-216ENST00000541372 ERICH3Q5RHP9 1530 aa26.19■■□□□ 1.78
SLC3A2-216ENST00000541372 PBRM1Q86U86 1689 aa26.18■■□□□ 1.78
SLC3A2-216ENST00000541372 FHAD1B1AJZ9 1412 aa26.17■■□□□ 1.78
SLC3A2-216ENST00000541372 CHD1O14646 1710 aa26.15■■□□□ 1.78
SLC3A2-216ENST00000541372 GRIN2AQ12879 1464 aa26.07■■□□□ 1.76
SLC3A2-216ENST00000541372 ADAMTS12P58397 1594 aa26.06■■□□□ 1.76
SLC3A2-216ENST00000541372 CARMIL1Q5VZK9 1371 aa26■■□□□ 1.75
SLC3A2-216ENST00000541372 RUSC2Q8N2Y8 1516 aa25.99■■□□□ 1.75
SLC3A2-216ENST00000541372 NUP160Q12769 1436 aa25.99■■□□□ 1.75
SLC3A2-216ENST00000541372 CLASP1Q7Z460 1538 aa25.98■■□□□ 1.75
SLC3A2-216ENST00000541372 CHIC1Q5VXU3 224 aa25.98■■□□□ 1.75
SLC3A2-216ENST00000541372 ARHGEF11O15085 1522 aa25.96■■□□□ 1.75
SLC3A2-216ENST00000541372 CYB5RLQ6IPT4 315 aa25.91■■□□□ 1.74
SLC3A2-216ENST00000541372 RIMBP3CA6NJZ7 1639 aa25.9■■□□□ 1.74
SLC3A2-216ENST00000541372 RIMBP3BA6NNM3 1639 aa25.9■■□□□ 1.74
SLC3A2-216ENST00000541372 RIMBP3Q9UFD9 1639 aa25.9■■□□□ 1.74
SLC3A2-216ENST00000541372 CEP170Q5SW79 1584 aa25.89■■□□□ 1.73
SLC3A2-216ENST00000541372 JPH4Q96JJ6 628 aa25.88■■□□□ 1.73
SLC3A2-216ENST00000541372 CUL7Q14999 1698 aa25.85■■□□□ 1.73
SLC3A2-216ENST00000541372 CSRNP3Q8WYN3 585 aa25.81■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 6.5 ms