RNA–Protein interactions for RNA: ENST00000338663.11

SLC3A2-201, Transcript of solute carrier family 3 member 2, humanhuman

TSL 1 (best) BASIC

Gene SLC3A2, Length 1,904 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC3A2-201ENST00000338663 NISCHQ9Y2I1 1504 aa38.71■■■■□ 3.79
SLC3A2-201ENST00000338663 CCDC180Q9P1Z9 1646 aa33.78■■■■□ 3
SLC3A2-201ENST00000338663 ZCCHC6Q5VYS8 1495 aaKnown RBP32.58■■■□□ 2.81
SLC3A2-201ENST00000338663 DCAF1Q9Y4B6 1507 aa32.04■■■□□ 2.72
SLC3A2-201ENST00000338663 DCAF8L2P0C7V8 631 aa31.77■■■□□ 2.68
SLC3A2-201ENST00000338663 ABCC9O60706 1549 aa31.69■■■□□ 2.66
SLC3A2-201ENST00000338663 SHROOM4Q9ULL8 1493 aa31.62■■■□□ 2.65
SLC3A2-201ENST00000338663 MYO15BQ96JP2 1530 aa31.6■■■□□ 2.65
SLC3A2-201ENST00000338663 NACADO15069 1562 aa31.36■■■□□ 2.61
SLC3A2-201ENST00000338663 RB1CC1Q8TDY2 1594 aa31.06■■■□□ 2.56
SLC3A2-201ENST00000338663 SCRIBQ14160 1630 aa31.04■■■□□ 2.56
SLC3A2-201ENST00000338663 UNC13AQ9UPW8 1703 aa30.55■■■□□ 2.48
SLC3A2-201ENST00000338663 SUPT5HO00267 1087 aaKnown RBP30.45■■■□□ 2.47
SLC3A2-201ENST00000338663 BICRAQ9NZM4 1560 aa30.14■■■□□ 2.42
SLC3A2-201ENST00000338663 RSF1Q96T23 1441 aaPredicted RBP30.06■■■□□ 2.4
SLC3A2-201ENST00000338663 CECR2Q9BXF3 1484 aa30.05■■■□□ 2.4
SLC3A2-201ENST00000338663 MROH2BQ7Z745 1585 aa29.91■■■□□ 2.38
SLC3A2-201ENST00000338663 BAZ1AQ9NRL2 1556 aaPredicted RBP29.9■■■□□ 2.38
SLC3A2-201ENST00000338663 PABPN1Q86U42 306 aaKnown RBP eCLIP29.84■■■□□ 2.37
SLC3A2-201ENST00000338663 SMARCA4P51532 1647 aa29.78■■■□□ 2.36
SLC3A2-201ENST00000338663 WIZO95785 1651 aa29.72■■■□□ 2.35
SLC3A2-201ENST00000338663 TOP2AP11388 1531 aaKnown RBP29.41■■■□□ 2.3
SLC3A2-201ENST00000338663 PEG3Q9GZU2 1588 aa29.41■■■□□ 2.3
SLC3A2-201ENST00000338663 CHIC1Q5VXU3 224 aa29.24■■■□□ 2.27
SLC3A2-201ENST00000338663 SMARCA2P51531 1590 aa29.21■■■□□ 2.27
SLC3A2-201ENST00000338663 EIF4G1Q04637 1599 aaKnown RBP29.21■■■□□ 2.27
SLC3A2-201ENST00000338663 ATAD2BQ9ULI0 1458 aa29.18■■■□□ 2.26
SLC3A2-201ENST00000338663 CCDC88BA6NC98 1476 aa29.06■■■□□ 2.24
SLC3A2-201ENST00000338663 BAZ1BQ9UIG0 1483 aaKnown RBP29.04■■■□□ 2.24
SLC3A2-201ENST00000338663 HMGXB3Q12766 1538 aa28.94■■■□□ 2.22
SLC3A2-201ENST00000338663 NCAPD3P42695 1498 aa28.9■■■□□ 2.22
SLC3A2-201ENST00000338663 CC2D2AQ9P2K1 1620 aa28.74■■■□□ 2.19
SLC3A2-201ENST00000338663 TRIM41Q8WV44 630 aa28.63■■■□□ 2.17
SLC3A2-201ENST00000338663 ABCC8Q09428 1581 aa28.54■■■□□ 2.16
SLC3A2-201ENST00000338663 PRDM2Q13029 1718 aa28.34■■■□□ 2.13
SLC3A2-201ENST00000338663 CFTRP13569 1480 aa28.31■■■□□ 2.12
SLC3A2-201ENST00000338663 WRNQ14191 1432 aaPredicted RBP eCLIP28.3■■■□□ 2.12
SLC3A2-201ENST00000338663 SYNJ1O43426 1573 aa28.24■■■□□ 2.11
SLC3A2-201ENST00000338663 CADPSQ9ULU8 1353 aa28.15■■■□□ 2.1
SLC3A2-201ENST00000338663 BIVM-ERCC5R4GMW8 1640 aa28.11■■■□□ 2.09
SLC3A2-201ENST00000338663 TOP2BQ02880 1626 aa28.11■■■□□ 2.09
SLC3A2-201ENST00000338663 LOC105371045A0A1W2PR82 267 aa28.1■■■□□ 2.09
SLC3A2-201ENST00000338663 FAM9AQ8IZU1 332 aaPredicted RBP28.1■■■□□ 2.09
SLC3A2-201ENST00000338663 HRCP23327 699 aa28■■■□□ 2.07
SLC3A2-201ENST00000338663 EEA1Q15075 1411 aa27.98■■■□□ 2.07
SLC3A2-201ENST00000338663 SOGA1O94964 1423 aa27.98■■■□□ 2.07
SLC3A2-201ENST00000338663 CUX1P39880 1505 aa27.98■■■□□ 2.07
SLC3A2-201ENST00000338663 LAMC3Q9Y6N6 1575 aa27.95■■■□□ 2.07
SLC3A2-201ENST00000338663 NESP48681 1621 aa27.89■■■□□ 2.05
SLC3A2-201ENST00000338663 FANCD2Q9BXW9 1451 aa27.87■■■□□ 2.05
SLC3A2-201ENST00000338663 RUSC2Q8N2Y8 1516 aa27.87■■■□□ 2.05
SLC3A2-201ENST00000338663 DNAJC5BQ9UF47 199 aa27.83■■■□□ 2.05
SLC3A2-201ENST00000338663 CSRNP3Q8WYN3 585 aa27.73■■■□□ 2.03
SLC3A2-201ENST00000338663 DNMBPQ6XZF7 1577 aa27.7■■■□□ 2.02
SLC3A2-201ENST00000338663 CEP164Q9UPV0 1460 aa27.7■■■□□ 2.02
SLC3A2-201ENST00000338663 EHMT2Q96KQ7 1210 aa27.69■■■□□ 2.02
SLC3A2-201ENST00000338663 KIF21BO75037 1637 aa27.68■■■□□ 2.02
SLC3A2-201ENST00000338663 PDS5BQ9NTI5 1447 aa27.66■■■□□ 2.02
SLC3A2-201ENST00000338663 KIF21AQ7Z4S6 1674 aa27.65■■■□□ 2.02
SLC3A2-201ENST00000338663 FGD5Q6ZNL6 1462 aa27.64■■■□□ 2.01
SLC3A2-201ENST00000338663 GOLGA3Q08378 1498 aa27.61■■■□□ 2.01
SLC3A2-201ENST00000338663 TOPBP1Q92547 1522 aa27.6■■■□□ 2.01
SLC3A2-201ENST00000338663 KIF27Q86VH2 1401 aa27.56■■■□□ 2
SLC3A2-201ENST00000338663 URB2Q14146 1524 aaKnown RBP27.53■■■□□ 2
SLC3A2-201ENST00000338663 TNIKQ9UKE5 1360 aa27.51■■■□□ 2
SLC3A2-201ENST00000338663 POLA1P09884 1462 aaPredicted RBP27.48■■□□□ 1.99
SLC3A2-201ENST00000338663 CUX2O14529 1486 aa27.46■■□□□ 1.99
SLC3A2-201ENST00000338663 ERICH3Q5RHP9 1530 aa27.44■■□□□ 1.98
SLC3A2-201ENST00000338663 PCGF6Q9BYE7 350 aa27.43■■□□□ 1.98
SLC3A2-201ENST00000338663 PRXQ9BXM0 1461 aa27.43■■□□□ 1.98
SLC3A2-201ENST00000338663 RAPGEF2Q9Y4G8 1499 aa27.42■■□□□ 1.98
SLC3A2-201ENST00000338663 CEP162Q5TB80 1403 aa27.41■■□□□ 1.98
SLC3A2-201ENST00000338663 WDR97A6NE52 1622 aa27.4■■□□□ 1.98
SLC3A2-201ENST00000338663 ABCA10Q8WWZ4 1543 aa27.39■■□□□ 1.98
SLC3A2-201ENST00000338663 UBTFP17480 764 aaKnown RBP27.38■■□□□ 1.97
SLC3A2-201ENST00000338663 RAD54L2Q9Y4B4 1467 aa27.36■■□□□ 1.97
SLC3A2-201ENST00000338663 MRC2Q9UBG0 1479 aa27.33■■□□□ 1.97
SLC3A2-201ENST00000338663 IGF1RP08069 1367 aa27.26■■□□□ 1.95
SLC3A2-201ENST00000338663 ABCA5Q8WWZ7 1642 aa27.23■■□□□ 1.95
SLC3A2-201ENST00000338663 WDR62O43379 1518 aa27.22■■□□□ 1.95
SLC3A2-201ENST00000338663 TARBP1Q13395 1621 aaKnown RBP27.22■■□□□ 1.95
SLC3A2-201ENST00000338663 CUL7Q14999 1698 aa27.17■■□□□ 1.94
SLC3A2-201ENST00000338663 ERCC6Q03468 1493 aa27.16■■□□□ 1.94
SLC3A2-201ENST00000338663 CLIP1P30622 1438 aa27.15■■□□□ 1.94
SLC3A2-201ENST00000338663 THOC2Q8NI27 1593 aaKnown RBP27.14■■□□□ 1.93
SLC3A2-201ENST00000338663 CARMIL1Q5VZK9 1371 aa27.13■■□□□ 1.93
SLC3A2-201ENST00000338663 GAPVD1Q14C86 1478 aa27.07■■□□□ 1.92
SLC3A2-201ENST00000338663 TRIM26Q12899 539 aaPredicted RBP27.06■■□□□ 1.92
SLC3A2-201ENST00000338663 TDRD9Q8NDG6 1382 aaKnown RBP27.05■■□□□ 1.92
SLC3A2-201ENST00000338663 PBRM1Q86U86 1689 aa27.03■■□□□ 1.92
SLC3A2-201ENST00000338663 IFT140Q96RY7 1462 aa27.01■■□□□ 1.91
SLC3A2-201ENST00000338663 PPARGC1BQ86YN6 1023 aaKnown RBP26.98■■□□□ 1.91
SLC3A2-201ENST00000338663 VPS8Q8N3P4 1428 aa26.95■■□□□ 1.91
SLC3A2-201ENST00000338663 CTTNBP2Q8WZ74 1663 aa26.94■■□□□ 1.9
SLC3A2-201ENST00000338663 ARAP1Q96P48 1450 aa26.9■■□□□ 1.9
SLC3A2-201ENST00000338663 ZEB1P37275 1124 aaPredicted RBP26.89■■□□□ 1.9
SLC3A2-201ENST00000338663 RANGAP1P46060 587 aaPredicted RBP26.88■■□□□ 1.89
SLC3A2-201ENST00000338663 AQRO60306 1485 aaKnown RBP eCLIP26.87■■□□□ 1.892e-7■■■■■ 28.2
SLC3A2-201ENST00000338663 ARHGAP35Q9NRY4 1499 aa26.86■■□□□ 1.89
SLC3A2-201ENST00000338663 ADAMTS12P58397 1594 aa26.85■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms