RNA–Protein interactions for RNA: ENST00000507019.5

MRPS18C-204, Transcript of mitochondrial ribosomal protein S18C, humanhuman

TSL 2 BASIC

Gene MRPS18C, Length 666 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS18C-204ENST00000507019 AEBP2Q6ZN18 517 aaPredicted RBP27■■□□□ 1.91
MRPS18C-204ENST00000507019 NISCHQ9Y2I1 1504 aa26.67■■□□□ 1.86
MRPS18C-204ENST00000507019 CHIC1Q5VXU3 224 aa26.03■■□□□ 1.76
MRPS18C-204ENST00000507019 CCDC180Q9P1Z9 1646 aa23.77■■□□□ 1.4
MRPS18C-204ENST00000507019 PHF23Q9BUL5 403 aaPredicted RBP22.98■■□□□ 1.27
MRPS18C-204ENST00000507019 ABCC9O60706 1549 aa22.78■■□□□ 1.24
MRPS18C-204ENST00000507019 SENP3Q9H4L4 574 aaPredicted RBP22.76■■□□□ 1.23
MRPS18C-204ENST00000507019 ZCCHC6Q5VYS8 1495 aaKnown RBP22.31■■□□□ 1.16
MRPS18C-204ENST00000507019 NACADO15069 1562 aa22.2■■□□□ 1.14
MRPS18C-204ENST00000507019 MYO15BQ96JP2 1530 aa22.19■■□□□ 1.14
MRPS18C-204ENST00000507019 RB1CC1Q8TDY2 1594 aa22.17■■□□□ 1.14
MRPS18C-204ENST00000507019 DCAF1Q9Y4B6 1507 aa22.17■■□□□ 1.14
MRPS18C-204ENST00000507019 DCAF8L2P0C7V8 631 aa21.93■■□□□ 1.1
MRPS18C-204ENST00000507019 UNC13AQ9UPW8 1703 aa21.7■■□□□ 1.06
MRPS18C-204ENST00000507019 SCRIBQ14160 1630 aa21.56■■□□□ 1.04
MRPS18C-204ENST00000507019 BICRAQ9NZM4 1560 aa21.44■■□□□ 1.02
MRPS18C-204ENST00000507019 SHROOM4Q9ULL8 1493 aa21.38■■□□□ 1.01
MRPS18C-204ENST00000507019 FOXD1Q16676 465 aa21.27■■□□□ 1
MRPS18C-204ENST00000507019 PABPN1Q86U42 306 aaKnown RBP eCLIP21.2■□□□□ 0.98
MRPS18C-204ENST00000507019 PLPPR3Q6T4P5 718 aa20.96■□□□□ 0.95
MRPS18C-204ENST00000507019 EIF4G1Q04637 1599 aaKnown RBP20.87■□□□□ 0.93
MRPS18C-204ENST00000507019 BAZ1AQ9NRL2 1556 aaPredicted RBP20.71■□□□□ 0.91
MRPS18C-204ENST00000507019 CC2D2AQ9P2K1 1620 aa20.71■□□□□ 0.91
MRPS18C-204ENST00000507019 SMARCA4P51532 1647 aa20.69■□□□□ 0.9
MRPS18C-204ENST00000507019 CECR2Q9BXF3 1484 aa20.65■□□□□ 0.9
MRPS18C-204ENST00000507019 DNAJC5BQ9UF47 199 aa20.53■□□□□ 0.88
MRPS18C-204ENST00000507019 PEG3Q9GZU2 1588 aa20.53■□□□□ 0.88
MRPS18C-204ENST00000507019 SMARCA2P51531 1590 aa20.52■□□□□ 0.88
MRPS18C-204ENST00000507019 MROH2BQ7Z745 1585 aa20.51■□□□□ 0.87
MRPS18C-204ENST00000507019 ATAD2BQ9ULI0 1458 aa20.43■□□□□ 0.86
MRPS18C-204ENST00000507019 HMGXB3Q12766 1538 aa20.43■□□□□ 0.86
MRPS18C-204ENST00000507019 NCAPD3P42695 1498 aa20.42■□□□□ 0.86
MRPS18C-204ENST00000507019 PPP6R1Q9UPN7 881 aa20.36■□□□□ 0.85
MRPS18C-204ENST00000507019 RSF1Q96T23 1441 aaPredicted RBP20.35■□□□□ 0.85
MRPS18C-204ENST00000507019 WIZO95785 1651 aa20.34■□□□□ 0.85
MRPS18C-204ENST00000507019 BAZ1BQ9UIG0 1483 aaKnown RBP20.32■□□□□ 0.84
MRPS18C-204ENST00000507019 ADRA2BP18089 450 aa20.29■□□□□ 0.84
MRPS18C-204ENST00000507019 TOP2AP11388 1531 aaKnown RBP20.2■□□□□ 0.82
MRPS18C-204ENST00000507019 PIAS4Q8N2W9 510 aaPredicted RBP19.94■□□□□ 0.78
MRPS18C-204ENST00000507019 LAMC3Q9Y6N6 1575 aa19.92■□□□□ 0.78
MRPS18C-204ENST00000507019 SUPT5HO00267 1087 aaKnown RBP19.86■□□□□ 0.77
MRPS18C-204ENST00000507019 CCDC88BA6NC98 1476 aa19.85■□□□□ 0.77
MRPS18C-204ENST00000507019 PRDM2Q13029 1718 aa19.83■□□□□ 0.77
MRPS18C-204ENST00000507019 CADPSQ9ULU8 1353 aa19.79■□□□□ 0.76
MRPS18C-204ENST00000507019 NESP48681 1621 aa19.78■□□□□ 0.76
MRPS18C-204ENST00000507019 CFTRP13569 1480 aa19.77■□□□□ 0.76
MRPS18C-204ENST00000507019 PDS5BQ9NTI5 1447 aa19.69■□□□□ 0.74
MRPS18C-204ENST00000507019 KIF21AQ7Z4S6 1674 aa19.69■□□□□ 0.74
MRPS18C-204ENST00000507019 ERCC6Q03468 1493 aa19.67■□□□□ 0.74
MRPS18C-204ENST00000507019 FANCD2Q9BXW9 1451 aa19.6■□□□□ 0.73
MRPS18C-204ENST00000507019 CEP164Q9UPV0 1460 aa19.59■□□□□ 0.73
MRPS18C-204ENST00000507019 THOC2Q8NI27 1593 aaKnown RBP19.57■□□□□ 0.72
MRPS18C-204ENST00000507019 MSH5O43196 834 aa19.56■□□□□ 0.72
MRPS18C-204ENST00000507019 MRC2Q9UBG0 1479 aa19.5■□□□□ 0.71
MRPS18C-204ENST00000507019 WDR62O43379 1518 aa19.47■□□□□ 0.71
MRPS18C-204ENST00000507019 CUX2O14529 1486 aa19.44■□□□□ 0.7
MRPS18C-204ENST00000507019 ABCC8Q09428 1581 aa19.39■□□□□ 0.69
MRPS18C-204ENST00000507019 DNMBPQ6XZF7 1577 aa19.38■□□□□ 0.69
MRPS18C-204ENST00000507019 URB2Q14146 1524 aaKnown RBP19.37■□□□□ 0.69
MRPS18C-204ENST00000507019 TOPBP1Q92547 1522 aa19.31■□□□□ 0.68
MRPS18C-204ENST00000507019 CUX1P39880 1505 aa19.25■□□□□ 0.67
MRPS18C-204ENST00000507019 BIVM-ERCC5R4GMW8 1640 aa19.25■□□□□ 0.67
MRPS18C-204ENST00000507019 TOP2BQ02880 1626 aa19.22■□□□□ 0.67
MRPS18C-204ENST00000507019 WRNQ14191 1432 aaPredicted RBP eCLIP19.22■□□□□ 0.67
MRPS18C-204ENST00000507019 SYNJ1O43426 1573 aa19.19■□□□□ 0.66
MRPS18C-204ENST00000507019 POLA1P09884 1462 aaPredicted RBP19.17■□□□□ 0.66
MRPS18C-204ENST00000507019 POTEDQ86YR6 584 aa19.16■□□□□ 0.66
MRPS18C-204ENST00000507019 FGD5Q6ZNL6 1462 aa19.16■□□□□ 0.66
MRPS18C-204ENST00000507019 IFT140Q96RY7 1462 aa19.16■□□□□ 0.66
MRPS18C-204ENST00000507019 TARBP1Q13395 1621 aaKnown RBP19.14■□□□□ 0.65
MRPS18C-204ENST00000507019 WDR97A6NE52 1622 aa19.11■□□□□ 0.65
MRPS18C-204ENST00000507019 EIF4G3O43432 1585 aaKnown RBP19.04■□□□□ 0.64
MRPS18C-204ENST00000507019 SOGA1O94964 1423 aa19.03■□□□□ 0.64
MRPS18C-204ENST00000507019 ABCA10Q8WWZ4 1543 aa19.01■□□□□ 0.63
MRPS18C-204ENST00000507019 RAD54L2Q9Y4B4 1467 aa19■□□□□ 0.63
MRPS18C-204ENST00000507019 ABCA5Q8WWZ7 1642 aa18.97■□□□□ 0.63
MRPS18C-204ENST00000507019 ZNF608Q9ULD9 1512 aaPredicted RBP18.97■□□□□ 0.63
MRPS18C-204ENST00000507019 PBRM1Q86U86 1689 aa18.94■□□□□ 0.62
MRPS18C-204ENST00000507019 AQRO60306 1485 aaKnown RBP eCLIP18.86■□□□□ 0.613e-7■■■□□ 19
MRPS18C-204ENST00000507019 GAPVD1Q14C86 1478 aa18.86■□□□□ 0.61
MRPS18C-204ENST00000507019 GRIN2BQ13224 1484 aa18.85■□□□□ 0.61
MRPS18C-204ENST00000507019 TDRD9Q8NDG6 1382 aaKnown RBP18.85■□□□□ 0.61
MRPS18C-204ENST00000507019 ERICH3Q5RHP9 1530 aa18.82■□□□□ 0.6
MRPS18C-204ENST00000507019 MAGI1Q96QZ7 1491 aaPredicted RBP18.82■□□□□ 0.6
MRPS18C-204ENST00000507019 TRIM41Q8WV44 630 aa18.8■□□□□ 0.6
MRPS18C-204ENST00000507019 KIF27Q86VH2 1401 aa18.8■□□□□ 0.6
MRPS18C-204ENST00000507019 SNAPC4Q5SXM2 1469 aa18.78■□□□□ 0.6
MRPS18C-204ENST00000507019 ADAMTS12P58397 1594 aa18.76■□□□□ 0.59
MRPS18C-204ENST00000507019 CHD1O14646 1710 aa18.76■□□□□ 0.59
MRPS18C-204ENST00000507019 CUL7Q14999 1698 aa18.76■□□□□ 0.59
MRPS18C-204ENST00000507019 SYNJ2O15056 1496 aa18.72■□□□□ 0.59
MRPS18C-204ENST00000507019 FHAD1B1AJZ9 1412 aa18.66■□□□□ 0.58
MRPS18C-204ENST00000507019 EEA1Q15075 1411 aa18.66■□□□□ 0.58
MRPS18C-204ENST00000507019 GRIN2AQ12879 1464 aa18.62■□□□□ 0.57
MRPS18C-204ENST00000507019 IGF1RP08069 1367 aa18.6■□□□□ 0.57
MRPS18C-204ENST00000507019 RUSC2Q8N2Y8 1516 aa18.59■□□□□ 0.57
MRPS18C-204ENST00000507019 CHMP7Q8WUX9 453 aaPredicted RBP18.56■□□□□ 0.56
MRPS18C-204ENST00000507019 CLASP1Q7Z460 1538 aa18.54■□□□□ 0.56
MRPS18C-204ENST00000507019 CEP170Q5SW79 1584 aa18.53■□□□□ 0.56
MRPS18C-204ENST00000507019 NUP160Q12769 1436 aa18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms