RNA–Protein interactions for RNA: ENST00000538084.1

SLC3A2-211, Transcript of solute carrier family 3 member 2, humanhuman

TSL 3

Gene SLC3A2, Length 741 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC3A2-211ENST00000538084 NISCHQ9Y2I1 1504 aa37.61■■■■□ 3.61
SLC3A2-211ENST00000538084 ABCC9O60706 1549 aa35.16■■■■□ 3.22
SLC3A2-211ENST00000538084 CCDC180Q9P1Z9 1646 aa34.07■■■■□ 3.04
SLC3A2-211ENST00000538084 DNAJC5BQ9UF47 199 aa33.83■■■■□ 3.01
SLC3A2-211ENST00000538084 RB1CC1Q8TDY2 1594 aa32.92■■■□□ 2.86
SLC3A2-211ENST00000538084 PABPN1Q86U42 306 aaKnown RBP eCLIP32.62■■■□□ 2.81
SLC3A2-211ENST00000538084 NACADO15069 1562 aa32.45■■■□□ 2.79
SLC3A2-211ENST00000538084 DCAF8L2P0C7V8 631 aa32.27■■■□□ 2.76
SLC3A2-211ENST00000538084 UNC13AQ9UPW8 1703 aa32.17■■■□□ 2.74
SLC3A2-211ENST00000538084 BICRAQ9NZM4 1560 aa32.05■■■□□ 2.72
SLC3A2-211ENST00000538084 CECR2Q9BXF3 1484 aa31.72■■■□□ 2.67
SLC3A2-211ENST00000538084 DNAJC5Q9H3Z4 198 aa31.66■■■□□ 2.66
SLC3A2-211ENST00000538084 MYO15BQ96JP2 1530 aa31.65■■■□□ 2.66
SLC3A2-211ENST00000538084 CC2D2AQ9P2K1 1620 aa31.64■■■□□ 2.65
SLC3A2-211ENST00000538084 SHROOM4Q9ULL8 1493 aa31.4■■■□□ 2.62
SLC3A2-211ENST00000538084 EIF4G1Q04637 1599 aaKnown RBP31.34■■■□□ 2.61
SLC3A2-211ENST00000538084 SCRIBQ14160 1630 aa31.13■■■□□ 2.57
SLC3A2-211ENST00000538084 ZCCHC6Q5VYS8 1495 aaKnown RBP30.98■■■□□ 2.55
SLC3A2-211ENST00000538084 DCAF1Q9Y4B6 1507 aa30.93■■■□□ 2.54
SLC3A2-211ENST00000538084 CUX2O14529 1486 aa30.57■■■□□ 2.48
SLC3A2-211ENST00000538084 ERCC6Q03468 1493 aa30.38■■■□□ 2.45
SLC3A2-211ENST00000538084 NCAPD3P42695 1498 aa30■■■□□ 2.39
SLC3A2-211ENST00000538084 TRIM41Q8WV44 630 aa30■■■□□ 2.39
SLC3A2-211ENST00000538084 NESP48681 1621 aa29.93■■■□□ 2.38
SLC3A2-211ENST00000538084 ATAD2BQ9ULI0 1458 aa29.82■■■□□ 2.36
SLC3A2-211ENST00000538084 THOC2Q8NI27 1593 aaKnown RBP29.75■■■□□ 2.35
SLC3A2-211ENST00000538084 HMGXB3Q12766 1538 aa29.68■■■□□ 2.34
SLC3A2-211ENST00000538084 SMARCA2P51531 1590 aa29.63■■■□□ 2.33
SLC3A2-211ENST00000538084 SMARCA4P51532 1647 aa29.53■■■□□ 2.32
SLC3A2-211ENST00000538084 BAZ1BQ9UIG0 1483 aaKnown RBP29.48■■■□□ 2.31
SLC3A2-211ENST00000538084 LAMC3Q9Y6N6 1575 aa29.45■■■□□ 2.31
SLC3A2-211ENST00000538084 KIF21AQ7Z4S6 1674 aa29.44■■■□□ 2.3
SLC3A2-211ENST00000538084 PDS5BQ9NTI5 1447 aa29.34■■■□□ 2.29
SLC3A2-211ENST00000538084 BAZ1AQ9NRL2 1556 aaPredicted RBP29.22■■■□□ 2.27
SLC3A2-211ENST00000538084 PEG3Q9GZU2 1588 aa29.2■■■□□ 2.26
SLC3A2-211ENST00000538084 MRC2Q9UBG0 1479 aa29.18■■■□□ 2.26
SLC3A2-211ENST00000538084 WDR62O43379 1518 aa29.12■■■□□ 2.25
SLC3A2-211ENST00000538084 CADPSQ9ULU8 1353 aa29.07■■■□□ 2.24
SLC3A2-211ENST00000538084 OSCARQ8IYS5 282 aa29.05■■■□□ 2.24
SLC3A2-211ENST00000538084 MROH2BQ7Z745 1585 aa29.01■■■□□ 2.24
SLC3A2-211ENST00000538084 CEP164Q9UPV0 1460 aa28.87■■■□□ 2.21
SLC3A2-211ENST00000538084 RIMBP3CA6NJZ7 1639 aa28.79■■■□□ 2.2
SLC3A2-211ENST00000538084 RIMBP3BA6NNM3 1639 aa28.79■■■□□ 2.2
SLC3A2-211ENST00000538084 RIMBP3Q9UFD9 1639 aa28.79■■■□□ 2.2
SLC3A2-211ENST00000538084 FANCD2Q9BXW9 1451 aa28.78■■■□□ 2.2
SLC3A2-211ENST00000538084 ARHGEF11O15085 1522 aa28.62■■■□□ 2.17
SLC3A2-211ENST00000538084 URB2Q14146 1524 aaKnown RBP28.61■■■□□ 2.17
SLC3A2-211ENST00000538084 WIZO95785 1651 aa28.61■■■□□ 2.17
SLC3A2-211ENST00000538084 CFTRP13569 1480 aa28.54■■■□□ 2.16
SLC3A2-211ENST00000538084 TRHP20396 242 aaPredicted RBP28.5■■■□□ 2.15
SLC3A2-211ENST00000538084 CYB5RLQ6IPT4 315 aa28.5■■■□□ 2.15
SLC3A2-211ENST00000538084 ZNF608Q9ULD9 1512 aaPredicted RBP28.44■■■□□ 2.14
SLC3A2-211ENST00000538084 AEBP2Q6ZN18 517 aaPredicted RBP28.33■■■□□ 2.13
SLC3A2-211ENST00000538084 IFT140Q96RY7 1462 aa28.31■■■□□ 2.12
SLC3A2-211ENST00000538084 ARAP1Q96P48 1450 aa28.3■■■□□ 2.12
SLC3A2-211ENST00000538084 EIF4G3O43432 1585 aaKnown RBP28.19■■■□□ 2.1
SLC3A2-211ENST00000538084 TOP2AP11388 1531 aaKnown RBP28.15■■■□□ 2.1
SLC3A2-211ENST00000538084 CHD1O14646 1710 aa28.12■■■□□ 2.09
SLC3A2-211ENST00000538084 TOPBP1Q92547 1522 aa28.12■■■□□ 2.09
SLC3A2-211ENST00000538084 FBLN2P98095 1184 aa28.09■■■□□ 2.09
SLC3A2-211ENST00000538084 RSF1Q96T23 1441 aaPredicted RBP28.08■■■□□ 2.09
SLC3A2-211ENST00000538084 PRDM2Q13029 1718 aa28.07■■■□□ 2.08
SLC3A2-211ENST00000538084 AQRO60306 1485 aaKnown RBP eCLIP28.06■■■□□ 2.082e-7■■■■■ 27.5
SLC3A2-211ENST00000538084 TARBP1Q13395 1621 aaKnown RBP27.92■■■□□ 2.06
SLC3A2-211ENST00000538084 ABCC8Q09428 1581 aa27.9■■■□□ 2.06
SLC3A2-211ENST00000538084 DNMBPQ6XZF7 1577 aa27.9■■■□□ 2.06
SLC3A2-211ENST00000538084 CCDC88BA6NC98 1476 aa27.88■■■□□ 2.05
SLC3A2-211ENST00000538084 CLASP1Q7Z460 1538 aa27.79■■■□□ 2.04
SLC3A2-211ENST00000538084 POLA1P09884 1462 aaPredicted RBP27.78■■■□□ 2.04
SLC3A2-211ENST00000538084 TDRD9Q8NDG6 1382 aaKnown RBP27.74■■■□□ 2.03
SLC3A2-211ENST00000538084 RAD54L2Q9Y4B4 1467 aa27.74■■■□□ 2.03
SLC3A2-211ENST00000538084 SNAPC4Q5SXM2 1469 aa27.73■■■□□ 2.03
SLC3A2-211ENST00000538084 CHMP7Q8WUX9 453 aaPredicted RBP27.67■■■□□ 2.02
SLC3A2-211ENST00000538084 SYNJ1O43426 1573 aa27.66■■■□□ 2.02
SLC3A2-211ENST00000538084 SOGA1O94964 1423 aa27.63■■■□□ 2.01
SLC3A2-211ENST00000538084 GAPVD1Q14C86 1478 aa27.59■■■□□ 2.01
SLC3A2-211ENST00000538084 MAGI1Q96QZ7 1491 aaPredicted RBP27.55■■■□□ 2
SLC3A2-211ENST00000538084 SYNJ2O15056 1496 aa27.5■■□□□ 1.99
SLC3A2-211ENST00000538084 FGD5Q6ZNL6 1462 aa27.48■■□□□ 1.99
SLC3A2-211ENST00000538084 GRIN2BQ13224 1484 aa27.47■■□□□ 1.99
SLC3A2-211ENST00000538084 WDR97A6NE52 1622 aa27.46■■□□□ 1.99
SLC3A2-211ENST00000538084 ERCC6L2Q5T890 1561 aa27.37■■□□□ 1.97
SLC3A2-211ENST00000538084 CUX1P39880 1505 aa27.31■■□□□ 1.96
SLC3A2-211ENST00000538084 PBRM1Q86U86 1689 aa27.27■■□□□ 1.96
SLC3A2-211ENST00000538084 ILDR1Q86SU0 546 aaPredicted RBP27.25■■□□□ 1.95
SLC3A2-211ENST00000538084 KIF13AQ9H1H9 1805 aa27.18■■□□□ 1.94
SLC3A2-211ENST00000538084 CEP170Q5SW79 1584 aa27.18■■□□□ 1.94
SLC3A2-211ENST00000538084 GRIN2AQ12879 1464 aa27.14■■□□□ 1.94
SLC3A2-211ENST00000538084 ABCA5Q8WWZ7 1642 aa27.12■■□□□ 1.93
SLC3A2-211ENST00000538084 KDM4FA0A1W2PPD8 638 aa27.09■■□□□ 1.93
SLC3A2-211ENST00000538084 NUP160Q12769 1436 aa27.07■■□□□ 1.92
SLC3A2-211ENST00000538084 ABCA10Q8WWZ4 1543 aa27.07■■□□□ 1.92
SLC3A2-211ENST00000538084 SHROOM2Q13796 1616 aa27.02■■□□□ 1.92
SLC3A2-211ENST00000538084 FAM69CQ0P6D2 419 aa27.02■■□□□ 1.92
SLC3A2-211ENST00000538084 ADAMTS12P58397 1594 aa27■■□□□ 1.91
SLC3A2-211ENST00000538084 ABCC10Q5T3U5 1492 aa26.96■■□□□ 1.91
SLC3A2-211ENST00000538084 PRG4Q92954 1404 aaPredicted RBP26.92■■□□□ 1.9
SLC3A2-211ENST00000538084 KDM6BO15054 1643 aa26.88■■□□□ 1.89
SLC3A2-211ENST00000538084 FHAD1B1AJZ9 1412 aa26.87■■□□□ 1.89
SLC3A2-211ENST00000538084 DIP2BQ9P265 1576 aa26.87■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms