Protein–RNA interactions for Protein: Q9P2X8

LINC00474, Putative uncharacterized protein encoded by LINC00474, humanhuman

Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00474Q9P2X8 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
LINC00474Q9P2X8 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
LINC00474Q9P2X8 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
LINC00474Q9P2X8 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
LINC00474Q9P2X8 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
LINC00474Q9P2X8 AC027612.3-201ENST00000413684 1047 ntBASIC13.7□□□□□ -0.22
LINC00474Q9P2X8 LGR4-203ENST00000480977 492 ntTSL 2 BASIC13.7□□□□□ -0.22
LINC00474Q9P2X8 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC13.7□□□□□ -0.22
LINC00474Q9P2X8 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
LINC00474Q9P2X8 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
LINC00474Q9P2X8 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
LINC00474Q9P2X8 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC13.7□□□□□ -0.22
LINC00474Q9P2X8 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
LINC00474Q9P2X8 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
LINC00474Q9P2X8 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
LINC00474Q9P2X8 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
LINC00474Q9P2X8 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC13.7□□□□□ -0.22
LINC00474Q9P2X8 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
LINC00474Q9P2X8 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
LINC00474Q9P2X8 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
LINC00474Q9P2X8 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC13.69□□□□□ -0.22
LINC00474Q9P2X8 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
LINC00474Q9P2X8 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LINC00474Q9P2X8 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LINC00474Q9P2X8 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LINC00474Q9P2X8 AC123595.1-201ENST00000440769 1046 ntBASIC13.69□□□□□ -0.22
LINC00474Q9P2X8 STOX2-205ENST00000513034 807 ntTSL 3 BASIC13.69□□□□□ -0.22
LINC00474Q9P2X8 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC13.69□□□□□ -0.22
LINC00474Q9P2X8 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LINC00474Q9P2X8 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
LINC00474Q9P2X8 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LINC00474Q9P2X8 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC13.69□□□□□ -0.22
LINC00474Q9P2X8 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LINC00474Q9P2X8 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
LINC00474Q9P2X8 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LINC00474Q9P2X8 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
LINC00474Q9P2X8 LINC02228-203ENST00000641970 1355 ntBASIC13.69□□□□□ -0.22
LINC00474Q9P2X8 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LINC00474Q9P2X8 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC13.69□□□□□ -0.22
LINC00474Q9P2X8 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC13.69□□□□□ -0.22
LINC00474Q9P2X8 AC080038.3-201ENST00000623346 1952 ntBASIC13.69□□□□□ -0.22
LINC00474Q9P2X8 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LINC00474Q9P2X8 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC13.69□□□□□ -0.22
LINC00474Q9P2X8 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LINC00474Q9P2X8 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC13.69□□□□□ -0.22
LINC00474Q9P2X8 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
LINC00474Q9P2X8 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LINC00474Q9P2X8 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC13.68□□□□□ -0.22
LINC00474Q9P2X8 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LINC00474Q9P2X8 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC13.68□□□□□ -0.22
LINC00474Q9P2X8 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
LINC00474Q9P2X8 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LINC00474Q9P2X8 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LINC00474Q9P2X8 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC13.68□□□□□ -0.22
LINC00474Q9P2X8 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
LINC00474Q9P2X8 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LINC00474Q9P2X8 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LINC00474Q9P2X8 GUK1-205ENST00000366722 850 ntTSL 3 BASIC13.68□□□□□ -0.22
LINC00474Q9P2X8 NT5C3AP1-201ENST00000394500 1012 ntBASIC13.68□□□□□ -0.22
LINC00474Q9P2X8 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
LINC00474Q9P2X8 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC13.68□□□□□ -0.22
LINC00474Q9P2X8 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LINC00474Q9P2X8 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC13.68□□□□□ -0.22
LINC00474Q9P2X8 AC104564.3-201ENST00000582367 638 ntBASIC13.68□□□□□ -0.22
LINC00474Q9P2X8 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
LINC00474Q9P2X8 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC13.68□□□□□ -0.22
LINC00474Q9P2X8 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LINC00474Q9P2X8 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
LINC00474Q9P2X8 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
LINC00474Q9P2X8 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LINC00474Q9P2X8 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LINC00474Q9P2X8 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC13.68□□□□□ -0.22
LINC00474Q9P2X8 ASL-203ENST00000380839 1765 ntTSL 5 BASIC13.68□□□□□ -0.22
LINC00474Q9P2X8 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC13.68□□□□□ -0.22
LINC00474Q9P2X8 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
LINC00474Q9P2X8 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LINC00474Q9P2X8 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC13.67□□□□□ -0.22
LINC00474Q9P2X8 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LINC00474Q9P2X8 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
LINC00474Q9P2X8 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LINC00474Q9P2X8 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC13.67□□□□□ -0.22
LINC00474Q9P2X8 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LINC00474Q9P2X8 STK25-234ENST00000535007 2459 ntTSL 2 BASIC13.67□□□□□ -0.22
LINC00474Q9P2X8 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LINC00474Q9P2X8 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LINC00474Q9P2X8 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
LINC00474Q9P2X8 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
LINC00474Q9P2X8 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
LINC00474Q9P2X8 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
LINC00474Q9P2X8 YBX1P1-201ENST00000445822 960 ntBASIC13.67□□□□□ -0.22
LINC00474Q9P2X8 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
LINC00474Q9P2X8 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
LINC00474Q9P2X8 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
LINC00474Q9P2X8 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LINC00474Q9P2X8 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
LINC00474Q9P2X8 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LINC00474Q9P2X8 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
LINC00474Q9P2X8 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
LINC00474Q9P2X8 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
LINC00474Q9P2X8 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC13.67□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms