Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
BLOC1S4Q9NUP1 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
BLOC1S4Q9NUP1 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC23.6■■□□□ 1.37
BLOC1S4Q9NUP1 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC23.6■■□□□ 1.37
BLOC1S4Q9NUP1 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
BLOC1S4Q9NUP1 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC23.6■■□□□ 1.37
BLOC1S4Q9NUP1 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
BLOC1S4Q9NUP1 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC23.6■■□□□ 1.37
BLOC1S4Q9NUP1 RARG-204ENST00000543726 1779 ntTSL 2 BASIC23.6■■□□□ 1.37
BLOC1S4Q9NUP1 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC23.59■■□□□ 1.37
BLOC1S4Q9NUP1 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
BLOC1S4Q9NUP1 AC019069.1-201ENST00000610008 1333 ntBASIC23.59■■□□□ 1.37
BLOC1S4Q9NUP1 AF106564.1-201ENST00000607058 2553 ntBASIC23.59■■□□□ 1.37
BLOC1S4Q9NUP1 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
BLOC1S4Q9NUP1 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC23.59■■□□□ 1.37
BLOC1S4Q9NUP1 KRT18P14-201ENST00000534205 1250 ntBASIC23.59■■□□□ 1.37
BLOC1S4Q9NUP1 AC053503.5-201ENST00000601508 636 ntBASIC23.59■■□□□ 1.37
BLOC1S4Q9NUP1 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC23.59■■□□□ 1.37
BLOC1S4Q9NUP1 AL024507.2-201ENST00000606070 2574 ntBASIC23.59■■□□□ 1.37
BLOC1S4Q9NUP1 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC23.59■■□□□ 1.37
BLOC1S4Q9NUP1 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
BLOC1S4Q9NUP1 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
BLOC1S4Q9NUP1 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC23.59■■□□□ 1.37
BLOC1S4Q9NUP1 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC23.59■■□□□ 1.37
BLOC1S4Q9NUP1 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
BLOC1S4Q9NUP1 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
BLOC1S4Q9NUP1 KRT87P-202ENST00000534226 1464 ntBASIC23.58■■□□□ 1.37
BLOC1S4Q9NUP1 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC23.58■■□□□ 1.37
BLOC1S4Q9NUP1 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC23.58■■□□□ 1.37
BLOC1S4Q9NUP1 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC23.58■■□□□ 1.37
BLOC1S4Q9NUP1 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
BLOC1S4Q9NUP1 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC23.58■■□□□ 1.37
BLOC1S4Q9NUP1 AC005229.4-201ENST00000610085 2198 ntBASIC23.58■■□□□ 1.36
BLOC1S4Q9NUP1 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC23.58■■□□□ 1.36
BLOC1S4Q9NUP1 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
BLOC1S4Q9NUP1 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
BLOC1S4Q9NUP1 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
BLOC1S4Q9NUP1 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
BLOC1S4Q9NUP1 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC23.57■■□□□ 1.36
BLOC1S4Q9NUP1 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC23.57■■□□□ 1.36
BLOC1S4Q9NUP1 KRT18P61-201ENST00000585825 1298 ntBASIC23.57■■□□□ 1.36
BLOC1S4Q9NUP1 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
BLOC1S4Q9NUP1 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC23.57■■□□□ 1.36
BLOC1S4Q9NUP1 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
BLOC1S4Q9NUP1 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
BLOC1S4Q9NUP1 STX5-203ENST00000394690 1568 ntTSL 5 BASIC23.57■■□□□ 1.36
BLOC1S4Q9NUP1 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC23.56■■□□□ 1.36
BLOC1S4Q9NUP1 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
BLOC1S4Q9NUP1 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC23.56■■□□□ 1.36
BLOC1S4Q9NUP1 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC23.56■■□□□ 1.36
BLOC1S4Q9NUP1 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC23.56■■□□□ 1.36
BLOC1S4Q9NUP1 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC23.56■■□□□ 1.36
BLOC1S4Q9NUP1 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC23.56■■□□□ 1.36
BLOC1S4Q9NUP1 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC23.56■■□□□ 1.36
BLOC1S4Q9NUP1 DUX4L2-201ENST00000561772 1275 ntBASIC23.56■■□□□ 1.36
BLOC1S4Q9NUP1 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC23.56■■□□□ 1.36
BLOC1S4Q9NUP1 DUX4L6-201ENST00000626483 1275 ntBASIC23.56■■□□□ 1.36
BLOC1S4Q9NUP1 DUX4L1-201ENST00000627662 1275 ntBASIC23.56■■□□□ 1.36
BLOC1S4Q9NUP1 DUX4L8-201ENST00000629013 1275 ntBASIC23.56■■□□□ 1.36
BLOC1S4Q9NUP1 DUX4L3-201ENST00000630187 1275 ntBASIC23.56■■□□□ 1.36
BLOC1S4Q9NUP1 DUX4L7-201ENST00000630678 1275 ntBASIC23.56■■□□□ 1.36
BLOC1S4Q9NUP1 DUX4L5-201ENST00000630834 1275 ntBASIC23.56■■□□□ 1.36
BLOC1S4Q9NUP1 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC23.56■■□□□ 1.36
BLOC1S4Q9NUP1 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC23.56■■□□□ 1.36
BLOC1S4Q9NUP1 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC23.56■■□□□ 1.36
BLOC1S4Q9NUP1 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
BLOC1S4Q9NUP1 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
BLOC1S4Q9NUP1 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC23.55■■□□□ 1.36
BLOC1S4Q9NUP1 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
BLOC1S4Q9NUP1 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
BLOC1S4Q9NUP1 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC23.55■■□□□ 1.36
BLOC1S4Q9NUP1 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC23.55■■□□□ 1.36
BLOC1S4Q9NUP1 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
BLOC1S4Q9NUP1 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
BLOC1S4Q9NUP1 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC23.55■■□□□ 1.36
BLOC1S4Q9NUP1 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
BLOC1S4Q9NUP1 AC097381.1-201ENST00000429019 1296 ntBASIC23.55■■□□□ 1.36
BLOC1S4Q9NUP1 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC23.55■■□□□ 1.36
BLOC1S4Q9NUP1 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
BLOC1S4Q9NUP1 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
BLOC1S4Q9NUP1 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC23.55■■□□□ 1.36
BLOC1S4Q9NUP1 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
BLOC1S4Q9NUP1 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
BLOC1S4Q9NUP1 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
BLOC1S4Q9NUP1 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC23.54■■□□□ 1.36
BLOC1S4Q9NUP1 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC23.54■■□□□ 1.36
BLOC1S4Q9NUP1 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
BLOC1S4Q9NUP1 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC23.54■■□□□ 1.36
BLOC1S4Q9NUP1 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
BLOC1S4Q9NUP1 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC23.54■■□□□ 1.36
BLOC1S4Q9NUP1 HACD1-201ENST00000326961 773 ntTSL 2 BASIC23.54■■□□□ 1.36
BLOC1S4Q9NUP1 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC23.54■■□□□ 1.36
BLOC1S4Q9NUP1 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC23.54■■□□□ 1.36
BLOC1S4Q9NUP1 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC23.54■■□□□ 1.36
BLOC1S4Q9NUP1 MIR6821-201ENST00000617625 74 ntBASIC23.54■■□□□ 1.36
BLOC1S4Q9NUP1 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
BLOC1S4Q9NUP1 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC23.54■■□□□ 1.36
BLOC1S4Q9NUP1 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC23.54■■□□□ 1.36
BLOC1S4Q9NUP1 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
BLOC1S4Q9NUP1 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms