Protein–RNA interactions for Protein: Q8TDI0

CHD5, Chromodomain-helicase-DNA-binding protein 5, humanhuman

Predictions only

Length 1,954 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD5Q8TDI0 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CHD5Q8TDI0 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CHD5Q8TDI0 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
CHD5Q8TDI0 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC21.54■■□□□ 1.04
CHD5Q8TDI0 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
CHD5Q8TDI0 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC21.54■■□□□ 1.04
CHD5Q8TDI0 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
CHD5Q8TDI0 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
CHD5Q8TDI0 DUX4L16-201ENST00000555130 1264 ntBASIC21.54■■□□□ 1.04
CHD5Q8TDI0 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC21.54■■□□□ 1.04
CHD5Q8TDI0 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC21.54■■□□□ 1.04
CHD5Q8TDI0 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC21.53■■□□□ 1.04
CHD5Q8TDI0 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC21.53■■□□□ 1.04
CHD5Q8TDI0 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CHD5Q8TDI0 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CHD5Q8TDI0 POU5F1P4-201ENST00000413175 1085 ntBASIC21.53■■□□□ 1.04
CHD5Q8TDI0 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CHD5Q8TDI0 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CHD5Q8TDI0 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CHD5Q8TDI0 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
CHD5Q8TDI0 AC061975.6-201ENST00000579045 1553 ntBASIC21.53■■□□□ 1.04
CHD5Q8TDI0 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CHD5Q8TDI0 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
CHD5Q8TDI0 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CHD5Q8TDI0 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC21.52■■□□□ 1.04
CHD5Q8TDI0 GXYLT1P2-201ENST00000433312 1230 ntBASIC21.52■■□□□ 1.04
CHD5Q8TDI0 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC21.52■■□□□ 1.04
CHD5Q8TDI0 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC21.52■■□□□ 1.04
CHD5Q8TDI0 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC21.52■■□□□ 1.04
CHD5Q8TDI0 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC21.52■■□□□ 1.04
CHD5Q8TDI0 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC21.52■■□□□ 1.04
CHD5Q8TDI0 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CHD5Q8TDI0 MFF-203ENST00000349901 1716 ntTSL 2 BASIC21.52■■□□□ 1.04
CHD5Q8TDI0 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CHD5Q8TDI0 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC21.52■■□□□ 1.04
CHD5Q8TDI0 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC21.52■■□□□ 1.03
CHD5Q8TDI0 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC21.52■■□□□ 1.03
CHD5Q8TDI0 AC244015.2-201ENST00000616358 1861 ntBASIC21.51■■□□□ 1.03
CHD5Q8TDI0 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CHD5Q8TDI0 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC21.51■■□□□ 1.03
CHD5Q8TDI0 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CHD5Q8TDI0 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC21.51■■□□□ 1.03
CHD5Q8TDI0 RAP2CP1-201ENST00000605103 478 ntBASIC21.51■■□□□ 1.03
CHD5Q8TDI0 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC21.51■■□□□ 1.03
CHD5Q8TDI0 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CHD5Q8TDI0 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CHD5Q8TDI0 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CHD5Q8TDI0 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC21.5■■□□□ 1.03
CHD5Q8TDI0 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
CHD5Q8TDI0 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC21.5■■□□□ 1.03
CHD5Q8TDI0 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC21.5■■□□□ 1.03
CHD5Q8TDI0 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC21.5■■□□□ 1.03
CHD5Q8TDI0 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC21.5■■□□□ 1.03
CHD5Q8TDI0 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC21.5■■□□□ 1.03
CHD5Q8TDI0 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
CHD5Q8TDI0 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
CHD5Q8TDI0 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC21.5■■□□□ 1.03
CHD5Q8TDI0 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
CHD5Q8TDI0 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
CHD5Q8TDI0 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CHD5Q8TDI0 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CHD5Q8TDI0 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CHD5Q8TDI0 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CHD5Q8TDI0 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CHD5Q8TDI0 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CHD5Q8TDI0 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC21.5■■□□□ 1.03
CHD5Q8TDI0 AP001160.3-201ENST00000601484 763 ntBASIC21.5■■□□□ 1.03
CHD5Q8TDI0 AC008175.2-201ENST00000612840 297 ntBASIC21.5■■□□□ 1.03
CHD5Q8TDI0 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC21.5■■□□□ 1.03
CHD5Q8TDI0 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
CHD5Q8TDI0 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC21.5■■□□□ 1.03
CHD5Q8TDI0 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CHD5Q8TDI0 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CHD5Q8TDI0 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
CHD5Q8TDI0 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CHD5Q8TDI0 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
CHD5Q8TDI0 BID-212ENST00000614949 1988 ntTSL 5 BASIC21.49■■□□□ 1.03
CHD5Q8TDI0 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
CHD5Q8TDI0 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC21.49■■□□□ 1.03
CHD5Q8TDI0 SLC7A5P2-201ENST00000553010 536 ntBASIC21.49■■□□□ 1.03
CHD5Q8TDI0 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC21.49■■□□□ 1.03
CHD5Q8TDI0 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
CHD5Q8TDI0 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CHD5Q8TDI0 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CHD5Q8TDI0 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CHD5Q8TDI0 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CHD5Q8TDI0 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CHD5Q8TDI0 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC21.49■■□□□ 1.03
CHD5Q8TDI0 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC21.49■■□□□ 1.03
CHD5Q8TDI0 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
CHD5Q8TDI0 AC079834.2-201ENST00000609776 1949 ntBASIC21.49■■□□□ 1.03
CHD5Q8TDI0 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CHD5Q8TDI0 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CHD5Q8TDI0 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC21.48■■□□□ 1.03
CHD5Q8TDI0 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC21.48■■□□□ 1.03
CHD5Q8TDI0 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
CHD5Q8TDI0 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC21.48■■□□□ 1.03
CHD5Q8TDI0 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CHD5Q8TDI0 GAS2L1P2-201ENST00000436355 1356 ntBASIC21.48■■□□□ 1.03
CHD5Q8TDI0 FBXW4P1-201ENST00000426721 2239 ntBASIC21.48■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 70.2 ms