Protein–RNA interactions for Protein: P25336

MSH3, DNA mismatch repair protein MSH3, yeastyeast

Predictions only

Length 1,018 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
MSH3P25336 PRM8YGL053W 714 nt4.84□□□□□ -1.63
MSH3P25336 HUR1YGL168W 333 nt4.84□□□□□ -1.63
MSH3P25336 YGR228WYGR228W 345 nt4.84□□□□□ -1.63
MSH3P25336 SPO13YHR014W 876 nt4.84□□□□□ -1.63
MSH3P25336 YAE1YJR067C 426 nt4.84□□□□□ -1.63
MSH3P25336 YOR199WYOR199W 330 nt4.84□□□□□ -1.63
MSH3P25336 MGR2YPL098C 342 nt4.84□□□□□ -1.63
MSH3P25336 YSY6YBR162W-A 198 nt4.84□□□□□ -1.63
MSH3P25336 BUD6YLR319C 2367 nt4.84□□□□□ -1.64
MSH3P25336 AZR1YGR224W 1842 nt4.83□□□□□ -1.64
MSH3P25336 MCM2YBL023C 2607 nt4.83□□□□□ -1.64
MSH3P25336 UBP16YPL072W 1500 nt4.83□□□□□ -1.64
MSH3P25336 BCH2YKR027W 2298 nt4.83□□□□□ -1.64
MSH3P25336 PFK1YGR240C 2964 nt4.83□□□□□ -1.64
MSH3P25336 YIL165CYIL165C 360 nt4.83□□□□□ -1.64
MSH3P25336 snR17asnR17a 333 nt4.83□□□□□ -1.64
MSH3P25336 SVS1YPL163C 783 nt4.83□□□□□ -1.64
MSH3P25336 IKS1YJL057C 2004 nt4.83□□□□□ -1.64
MSH3P25336 MON1YGL124C 1935 nt4.83□□□□□ -1.64
MSH3P25336 HOYDL227C 1761 nt4.83□□□□□ -1.64
MSH3P25336 SEC59YMR013C 1560 nt4.82□□□□□ -1.64
MSH3P25336 TRF5YNL299W 1929 nt4.82□□□□□ -1.64
MSH3P25336 FAR7YFR008W 666 nt4.82□□□□□ -1.64
MSH3P25336 BUD13YGL174W 801 nt4.82□□□□□ -1.64
MSH3P25336 RSM25YIL093C 795 nt4.82□□□□□ -1.64
MSH3P25336 YJL119CYJL119C 324 nt4.82□□□□□ -1.64
MSH3P25336 VPS51YKR020W 495 nt4.82□□□□□ -1.64
MSH3P25336 IES3YLR052W 753 nt4.82□□□□□ -1.64
MSH3P25336 PBI2YNL015W 228 nt4.82□□□□□ -1.64
MSH3P25336 CIN5YOR028C 888 nt4.82□□□□□ -1.64
MSH3P25336 YPS7YDR349C 1791 nt4.82□□□□□ -1.64
MSH3P25336 TSR1YDL060W 2367 nt4.82□□□□□ -1.64
MSH3P25336 TEL1YBL088C 8364 nt4.82□□□□□ -1.64
MSH3P25336 YND1YER005W 1893 nt4.81□□□□□ -1.64
MSH3P25336 RPG1YBR079C 2895 nt4.81□□□□□ -1.64
MSH3P25336 ECM22YLR228C 2445 nt4.81□□□□□ -1.64
MSH3P25336 BMH2YDR099W 822 nt4.81□□□□□ -1.64
MSH3P25336 HOM2YDR158W 1098 nt4.81□□□□□ -1.64
MSH3P25336 CHZ1YER030W 462 nt4.81□□□□□ -1.64
MSH3P25336 YGR039WYGR039W 312 nt4.81□□□□□ -1.64
MSH3P25336 UBI4YLL039C 1146 nt4.81□□□□□ -1.64
MSH3P25336 CAT5YOR125C 702 nt4.81□□□□□ -1.64
MSH3P25336 YER006C-AYER006C-A 318 nt4.8□□□□□ -1.64
MSH3P25336 YER079WYER079W 633 nt4.8□□□□□ -1.64
MSH3P25336 TPM2YIL138C 486 nt4.8□□□□□ -1.64
MSH3P25336 YIR036W-AYIR036W-A 402 nt4.8□□□□□ -1.64
MSH3P25336 MAK16YAL025C 921 nt4.8□□□□□ -1.64
MSH3P25336 BNA1YJR025C 534 nt4.8□□□□□ -1.64
MSH3P25336 YJR038CYJR038C 363 nt4.8□□□□□ -1.64
MSH3P25336 NNF1YJR112W 606 nt4.8□□□□□ -1.64
MSH3P25336 DDR48YMR173W 1293 nt4.8□□□□□ -1.64
MSH3P25336 YCR023CYCR023C 1836 nt4.8□□□□□ -1.64
MSH3P25336 YCF1YDR135C 4548 nt4.8□□□□□ -1.64
MSH3P25336 AIM14YGL160W 1713 nt4.8□□□□□ -1.64
MSH3P25336 WHI3YNL197C 1986 nt4.8□□□□□ -1.64
MSH3P25336 RAD52YML032C 1416 nt4.8□□□□□ -1.64
MSH3P25336 STV1YMR054W 2673 nt4.79□□□□□ -1.64
MSH3P25336 RIA1YNL163C 3333 nt4.79□□□□□ -1.64
MSH3P25336 PEX30YLR324W 1572 nt4.79□□□□□ -1.64
MSH3P25336 TFB2YPL122C 1542 nt4.79□□□□□ -1.64
MSH3P25336 ELO2YCR034W 1044 nt4.79□□□□□ -1.64
MSH3P25336 HLR1YDR528W 1272 nt4.79□□□□□ -1.64
MSH3P25336 GET1YGL020C 708 nt4.79□□□□□ -1.64
MSH3P25336 LSB1YGR136W 726 nt4.79□□□□□ -1.64
MSH3P25336 BIO2YGR286C 1128 nt4.79□□□□□ -1.64
MSH3P25336 YHR138CYHR138C 345 nt4.79□□□□□ -1.64
MSH3P25336 SDP1YIL113W 630 nt4.79□□□□□ -1.64
MSH3P25336 RPL17BYJL177W 555 nt4.79□□□□□ -1.64
MSH3P25336 ACF4YJR083C 930 nt4.79□□□□□ -1.64
MSH3P25336 YKT6YKL196C 603 nt4.79□□□□□ -1.64
MSH3P25336 RFU1YLR073C 603 nt4.79□□□□□ -1.64
MSH3P25336 MRPS9YBR146W 837 nt4.79□□□□□ -1.64
MSH3P25336 GPX2YBR244W 489 nt4.79□□□□□ -1.64
MSH3P25336 ASI3YNL008C 2031 nt4.79□□□□□ -1.64
MSH3P25336 YDR274CYDR274C 372 nt4.78□□□□□ -1.64
MSH3P25336 BNA6YFR047C 888 nt4.78□□□□□ -1.64
MSH3P25336 ECL1YGR146C 636 nt4.78□□□□□ -1.64
MSH3P25336 YKL070WYKL070W 510 nt4.78□□□□□ -1.64
MSH3P25336 SEC22YLR268W 645 nt4.78□□□□□ -1.64
MSH3P25336 YMR087WYMR087W 855 nt4.78□□□□□ -1.64
MSH3P25336 YMR153C-AYMR153C-A 336 nt4.78□□□□□ -1.64
MSH3P25336 YMR193C-AYMR193C-A 387 nt4.78□□□□□ -1.64
MSH3P25336 GPI15YNL038W 690 nt4.78□□□□□ -1.64
MSH3P25336 RGS2YOR107W 930 nt4.78□□□□□ -1.64
MSH3P25336 FYV5YCL058C 459 nt4.78□□□□□ -1.64
MSH3P25336 OAF1YAL051W 3144 nt4.78□□□□□ -1.64
MSH3P25336 VHR1YIL056W 1923 nt4.78□□□□□ -1.64
MSH3P25336 VID28YIL017C 2766 nt4.77□□□□□ -1.65
MSH3P25336 BRE4YDL231C 3378 nt4.77□□□□□ -1.65
MSH3P25336 ADP1YCR011C 3150 nt4.77□□□□□ -1.65
MSH3P25336 ATG31YDR022C 591 nt4.77□□□□□ -1.65
MSH3P25336 DPB4YDR121W 591 nt4.77□□□□□ -1.65
MSH3P25336 YER087C-AYER087C-A 552 nt4.77□□□□□ -1.65
MSH3P25336 YIL171W-AYIL171W-A 453 nt4.77□□□□□ -1.65
MSH3P25336 YJL220WYJL220W 453 nt4.77□□□□□ -1.65
MSH3P25336 YLL044WYLL044W 447 nt4.77□□□□□ -1.65
MSH3P25336 RDN58-1RDN58-1 158 nt4.77□□□□□ -1.65
MSH3P25336 RDN58-2RDN58-2 158 nt4.77□□□□□ -1.65
MSH3P25336 RIM11YMR139W 1113 nt4.77□□□□□ -1.65
MSH3P25336 YOL159CYOL159C 516 nt4.77□□□□□ -1.65
Retrieved 100 of 7,029 protein–RNA pairs in 18.5 ms