Protein–RNA interactions for Protein: P0CX71

TY1A-ER1, Transposon Ty1-ER1 Gag polyprotein, yeastyeast

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1A-ER1P0CX71 MSL5YLR116W 1431 nt4.54□□□□□ -1.68
TY1A-ER1P0CX71 YND1YER005W 1893 nt4.54□□□□□ -1.68
TY1A-ER1P0CX71 ALG6YOR002W 1635 nt4.54□□□□□ -1.68
TY1A-ER1P0CX71 YML096WYML096W 1578 nt4.53□□□□□ -1.68
TY1A-ER1P0CX71 YCR045W-AYCR045W-A 351 nt4.53□□□□□ -1.68
TY1A-ER1P0CX71 API2YDR525W 330 nt4.53□□□□□ -1.68
TY1A-ER1P0CX71 YDR537CYDR537C 606 nt4.53□□□□□ -1.68
TY1A-ER1P0CX71 RPB3YIL021W 957 nt4.53□□□□□ -1.68
TY1A-ER1P0CX71 MCM22YJR135C 720 nt4.53□□□□□ -1.68
TY1A-ER1P0CX71 OAR1YKL055C 837 nt4.53□□□□□ -1.68
TY1A-ER1P0CX71 ERG2YMR202W 669 nt4.53□□□□□ -1.68
TY1A-ER1P0CX71 TAF9YMR236W 474 nt4.53□□□□□ -1.68
TY1A-ER1P0CX71 SIW14YNL032W 846 nt4.53□□□□□ -1.68
TY1A-ER1P0CX71 COQ10YOL008W 624 nt4.53□□□□□ -1.68
TY1A-ER1P0CX71 ARC40YBR234C 1155 nt4.53□□□□□ -1.68
TY1A-ER1P0CX71 PCA1YBR295W 3651 nt4.53□□□□□ -1.68
TY1A-ER1P0CX71 OST1YJL002C 1431 nt4.53□□□□□ -1.68
TY1A-ER1P0CX71 SEG2YKL105C 3399 nt4.53□□□□□ -1.68
TY1A-ER1P0CX71 STE24YJR117W 1362 nt4.53□□□□□ -1.69
TY1A-ER1P0CX71 ATM1YMR301C 2073 nt4.52□□□□□ -1.69
TY1A-ER1P0CX71 NUP116YMR047C 3342 nt4.52□□□□□ -1.69
TY1A-ER1P0CX71 FMN1YDR236C 657 nt4.52□□□□□ -1.69
TY1A-ER1P0CX71 YEL077W-AYEL077W-A 483 nt4.52□□□□□ -1.69
TY1A-ER1P0CX71 YER190C-BYER190C-B 483 nt4.52□□□□□ -1.69
TY1A-ER1P0CX71 YFL068WYFL068W 483 nt4.52□□□□□ -1.69
TY1A-ER1P0CX71 YGR296C-BYGR296C-B 483 nt4.52□□□□□ -1.69
TY1A-ER1P0CX71 YHL050W-AYHL050W-A 483 nt4.52□□□□□ -1.69
TY1A-ER1P0CX71 YHR219C-AYHR219C-A 483 nt4.52□□□□□ -1.69
TY1A-ER1P0CX71 YKL151CYKL151C 1014 nt4.52□□□□□ -1.69
TY1A-ER1P0CX71 TDA8YAL064C-A 381 nt4.52□□□□□ -1.69
TY1A-ER1P0CX71 YLL066W-AYLL066W-A 483 nt4.52□□□□□ -1.69
TY1A-ER1P0CX71 YLL067W-AYLL067W-A 483 nt4.52□□□□□ -1.69
TY1A-ER1P0CX71 YLR466C-AYLR466C-A 483 nt4.52□□□□□ -1.69
TY1A-ER1P0CX71 YLR467C-AYLR467C-A 483 nt4.52□□□□□ -1.69
TY1A-ER1P0CX71 YML133W-BYML133W-B 483 nt4.52□□□□□ -1.69
TY1A-ER1P0CX71 RPL15BYMR121C 615 nt4.52□□□□□ -1.69
TY1A-ER1P0CX71 RPR1RPR1 369 nt4.52□□□□□ -1.69
TY1A-ER1P0CX71 PDR17YNL264C 1053 nt4.52□□□□□ -1.69
TY1A-ER1P0CX71 YNL339W-BYNL339W-B 483 nt4.52□□□□□ -1.69
TY1A-ER1P0CX71 YBL113W-AYBL113W-A 483 nt4.52□□□□□ -1.69
TY1A-ER1P0CX71 YOR396C-AYOR396C-A 483 nt4.52□□□□□ -1.69
TY1A-ER1P0CX71 YPL283W-BYPL283W-B 483 nt4.52□□□□□ -1.69
TY1A-ER1P0CX71 YPR204C-AYPR204C-A 483 nt4.52□□□□□ -1.69
TY1A-ER1P0CX71 REI1YBR267W 1182 nt4.52□□□□□ -1.69
TY1A-ER1P0CX71 PRP43YGL120C 2304 nt4.52□□□□□ -1.69
TY1A-ER1P0CX71 SSF2YDR312W 1362 nt4.52□□□□□ -1.69
TY1A-ER1P0CX71 QDR1YIL120W 1692 nt4.51□□□□□ -1.69
TY1A-ER1P0CX71 KRE6YPR159W 2163 nt4.51□□□□□ -1.69
TY1A-ER1P0CX71 SLK19YOR195W 2466 nt4.51□□□□□ -1.69
TY1A-ER1P0CX71 OAF1YAL051W 3144 nt4.51□□□□□ -1.69
TY1A-ER1P0CX71 RSC6YCR052W 1452 nt4.51□□□□□ -1.69
TY1A-ER1P0CX71 SEC39YLR440C 2130 nt4.51□□□□□ -1.69
TY1A-ER1P0CX71 MGS1YNL218W 1764 nt4.51□□□□□ -1.69
TY1A-ER1P0CX71 RRI2YOL117W 1938 nt4.51□□□□□ -1.69
TY1A-ER1P0CX71 MDR1YGR100W 2853 nt4.51□□□□□ -1.69
TY1A-ER1P0CX71 RTR2YDR066C 591 nt4.51□□□□□ -1.69
TY1A-ER1P0CX71 GCG1YER163C 699 nt4.51□□□□□ -1.69
TY1A-ER1P0CX71 YFL015CYFL015C 495 nt4.51□□□□□ -1.69
TY1A-ER1P0CX71 RPL28YGL103W 450 nt4.51□□□□□ -1.69
TY1A-ER1P0CX71 RMR1YGL250W 726 nt4.51□□□□□ -1.69
TY1A-ER1P0CX71 YKL118WYKL118W 312 nt4.51□□□□□ -1.69
TY1A-ER1P0CX71 ECM4YKR076W 1113 nt4.51□□□□□ -1.69
TY1A-ER1P0CX71 YKE2YLR200W 345 nt4.51□□□□□ -1.69
TY1A-ER1P0CX71 RPS16AYMR143W 432 nt4.51□□□□□ -1.69
TY1A-ER1P0CX71 YNL042W-BYNL042W-B 258 nt4.51□□□□□ -1.69
TY1A-ER1P0CX71 YAF9YNL107W 681 nt4.51□□□□□ -1.69
TY1A-ER1P0CX71 YBR126W-AYBR126W-A 207 nt4.51□□□□□ -1.69
TY1A-ER1P0CX71 TOG1YER184C 2385 nt4.51□□□□□ -1.69
TY1A-ER1P0CX71 GCD10YNL062C 1437 nt4.51□□□□□ -1.69
TY1A-ER1P0CX71 HDA2YDR295C 2025 nt4.51□□□□□ -1.69
TY1A-ER1P0CX71 TOS3YGL179C 1683 nt4.51□□□□□ -1.69
TY1A-ER1P0CX71 RIM15YFL033C 5313 nt4.51□□□□□ -1.69
TY1A-ER1P0CX71 AVT1YJR001W 1809 nt4.51□□□□□ -1.69
TY1A-ER1P0CX71 YCR090CYCR090C 549 nt4.5□□□□□ -1.69
TY1A-ER1P0CX71 YDR149CYDR149C 708 nt4.5□□□□□ -1.69
TY1A-ER1P0CX71 YDR262WYDR262W 819 nt4.5□□□□□ -1.69
TY1A-ER1P0CX71 CPR5YDR304C 678 nt4.5□□□□□ -1.69
TY1A-ER1P0CX71 YFL064CYFL064C 525 nt4.5□□□□□ -1.69
TY1A-ER1P0CX71 LIA1YJR070C 978 nt4.5□□□□□ -1.69
TY1A-ER1P0CX71 CGI121YML036W 546 nt4.5□□□□□ -1.69
TY1A-ER1P0CX71 UBC11YOR339C 471 nt4.5□□□□□ -1.69
TY1A-ER1P0CX71 TRK2YKR050W 2670 nt4.5□□□□□ -1.69
TY1A-ER1P0CX71 ATH1YPR026W 3636 nt4.5□□□□□ -1.69
TY1A-ER1P0CX71 HUL5YGL141W 2733 nt4.5□□□□□ -1.69
TY1A-ER1P0CX71 NCS2YNL119W 1482 nt4.49□□□□□ -1.69
TY1A-ER1P0CX71 SKG3YLR187W 3081 nt4.49□□□□□ -1.69
TY1A-ER1P0CX71 HFD1YMR110C 1599 nt4.49□□□□□ -1.69
TY1A-ER1P0CX71 SEN54YPL083C 1404 nt4.49□□□□□ -1.69
TY1A-ER1P0CX71 YBR238CYBR238C 2196 nt4.49□□□□□ -1.69
TY1A-ER1P0CX71 ARP2YDL029W 1176 nt4.49□□□□□ -1.69
TY1A-ER1P0CX71 YAL063C-AYAL063C-A 291 nt4.49□□□□□ -1.69
TY1A-ER1P0CX71 ARV1YLR242C 966 nt4.49□□□□□ -1.69
TY1A-ER1P0CX71 ISU2YOR226C 471 nt4.49□□□□□ -1.69
TY1A-ER1P0CX71 BLM10YFL007W 6432 nt4.49□□□□□ -1.69
TY1A-ER1P0CX71 FZO1YBR179C 2568 nt4.49□□□□□ -1.69
TY1A-ER1P0CX71 TPO2YGR138C 1845 nt4.49□□□□□ -1.69
TY1A-ER1P0CX71 MNT2YGL257C 1677 nt4.48□□□□□ -1.69
TY1A-ER1P0CX71 PRP3YDR473C 1410 nt4.48□□□□□ -1.69
TY1A-ER1P0CX71 HMRA2YCR096C 360 nt4.48□□□□□ -1.69
TY1A-ER1P0CX71 HOP2YGL033W 657 nt4.48□□□□□ -1.69
Retrieved 100 of 7,029 protein–RNA pairs in 58.3 ms