Protein–RNA interactions for Protein: P07988

SFTPB, Pulmonary surfactant-associated protein B, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPBP07988 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
SFTPBP07988 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
SFTPBP07988 AC026471.6-201ENST00000622954 1905 ntBASIC18.29■□□□□ 0.52
SFTPBP07988 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC18.29■□□□□ 0.52
SFTPBP07988 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
SFTPBP07988 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
SFTPBP07988 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
SFTPBP07988 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
SFTPBP07988 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
SFTPBP07988 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
SFTPBP07988 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC18.29■□□□□ 0.52
SFTPBP07988 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
SFTPBP07988 AC091305.1-201ENST00000479476 895 ntBASIC18.29■□□□□ 0.52
SFTPBP07988 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC18.29■□□□□ 0.52
SFTPBP07988 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC18.29■□□□□ 0.52
SFTPBP07988 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SFTPBP07988 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SFTPBP07988 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
SFTPBP07988 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
SFTPBP07988 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
SFTPBP07988 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC18.28■□□□□ 0.52
SFTPBP07988 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SFTPBP07988 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SFTPBP07988 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SFTPBP07988 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC18.28■□□□□ 0.52
SFTPBP07988 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SFTPBP07988 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SFTPBP07988 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SFTPBP07988 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SFTPBP07988 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC18.28■□□□□ 0.52
SFTPBP07988 AC105265.2-201ENST00000467189 838 ntBASIC18.28■□□□□ 0.52
SFTPBP07988 AC027682.1-201ENST00000562846 899 ntBASIC18.28■□□□□ 0.52
SFTPBP07988 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SFTPBP07988 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
SFTPBP07988 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SFTPBP07988 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
SFTPBP07988 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SFTPBP07988 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC18.27■□□□□ 0.52
SFTPBP07988 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
SFTPBP07988 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
SFTPBP07988 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
SFTPBP07988 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
SFTPBP07988 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SFTPBP07988 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
SFTPBP07988 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC18.27■□□□□ 0.52
SFTPBP07988 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
SFTPBP07988 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC18.27■□□□□ 0.52
SFTPBP07988 PALM-208ENST00000592155 2272 ntTSL 4 BASIC18.27■□□□□ 0.52
SFTPBP07988 AC099791.1-201ENST00000416440 715 ntBASIC18.27■□□□□ 0.52
SFTPBP07988 STOX2-205ENST00000513034 807 ntTSL 3 BASIC18.27■□□□□ 0.52
SFTPBP07988 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
SFTPBP07988 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC18.27■□□□□ 0.52
SFTPBP07988 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC18.27■□□□□ 0.52
SFTPBP07988 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SFTPBP07988 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
SFTPBP07988 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SFTPBP07988 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
SFTPBP07988 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SFTPBP07988 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
SFTPBP07988 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
SFTPBP07988 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SFTPBP07988 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SFTPBP07988 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SFTPBP07988 AC010141.3-201ENST00000456659 717 ntBASIC18.26■□□□□ 0.51
SFTPBP07988 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC18.26■□□□□ 0.51
SFTPBP07988 AC087239.1-201ENST00000622671 572 ntBASIC18.26■□□□□ 0.51
SFTPBP07988 AL121603.2-201ENST00000557373 2117 ntBASIC18.26■□□□□ 0.51
SFTPBP07988 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SFTPBP07988 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SFTPBP07988 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
SFTPBP07988 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
SFTPBP07988 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC18.25■□□□□ 0.51
SFTPBP07988 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
SFTPBP07988 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SFTPBP07988 RASA4CP-201ENST00000424092 1398 ntBASIC18.25■□□□□ 0.51
SFTPBP07988 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
SFTPBP07988 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SFTPBP07988 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
SFTPBP07988 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SFTPBP07988 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SFTPBP07988 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SFTPBP07988 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
SFTPBP07988 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
SFTPBP07988 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC18.24■□□□□ 0.51
SFTPBP07988 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SFTPBP07988 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SFTPBP07988 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC18.24■□□□□ 0.51
SFTPBP07988 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SFTPBP07988 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SFTPBP07988 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
SFTPBP07988 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC18.24■□□□□ 0.51
SFTPBP07988 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC18.24■□□□□ 0.51
SFTPBP07988 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
SFTPBP07988 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
SFTPBP07988 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC18.24■□□□□ 0.51
SFTPBP07988 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
SFTPBP07988 OXCT2P1-201ENST00000447263 1535 ntBASIC18.23■□□□□ 0.51
SFTPBP07988 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
SFTPBP07988 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
SFTPBP07988 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms