Protein–RNA interactions for Protein: O15239

NDUFA1, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA1O15239 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
NDUFA1O15239 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
NDUFA1O15239 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
NDUFA1O15239 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC14.42□□□□□ -0.1
NDUFA1O15239 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
NDUFA1O15239 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
NDUFA1O15239 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC14.42□□□□□ -0.1
NDUFA1O15239 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
NDUFA1O15239 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
NDUFA1O15239 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC14.42□□□□□ -0.1
NDUFA1O15239 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
NDUFA1O15239 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
NDUFA1O15239 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
NDUFA1O15239 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC14.42□□□□□ -0.1
NDUFA1O15239 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
NDUFA1O15239 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
NDUFA1O15239 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
NDUFA1O15239 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC14.42□□□□□ -0.1
NDUFA1O15239 STX6-204ENST00000542060 4809 ntTSL 2 BASIC14.42□□□□□ -0.1
NDUFA1O15239 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
NDUFA1O15239 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
NDUFA1O15239 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
NDUFA1O15239 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
NDUFA1O15239 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC14.42□□□□□ -0.1
NDUFA1O15239 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC14.42□□□□□ -0.1
NDUFA1O15239 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC14.41□□□□□ -0.1
NDUFA1O15239 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
NDUFA1O15239 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC14.41□□□□□ -0.1
NDUFA1O15239 C17orf82-201ENST00000623772 1530 ntBASIC14.41□□□□□ -0.1
NDUFA1O15239 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
NDUFA1O15239 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
NDUFA1O15239 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
NDUFA1O15239 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
NDUFA1O15239 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
NDUFA1O15239 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
NDUFA1O15239 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
NDUFA1O15239 RARRES2P1-201ENST00000474487 481 ntBASIC14.41□□□□□ -0.1
NDUFA1O15239 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC14.41□□□□□ -0.1
NDUFA1O15239 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
NDUFA1O15239 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
NDUFA1O15239 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
NDUFA1O15239 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
NDUFA1O15239 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC14.41□□□□□ -0.1
NDUFA1O15239 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
NDUFA1O15239 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
NDUFA1O15239 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
NDUFA1O15239 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
NDUFA1O15239 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
NDUFA1O15239 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
NDUFA1O15239 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
NDUFA1O15239 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
NDUFA1O15239 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
NDUFA1O15239 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
NDUFA1O15239 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
NDUFA1O15239 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
NDUFA1O15239 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
NDUFA1O15239 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
NDUFA1O15239 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
NDUFA1O15239 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
NDUFA1O15239 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
NDUFA1O15239 RNF165-205ENST00000588679 2904 ntBASIC14.4□□□□□ -0.1
NDUFA1O15239 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
NDUFA1O15239 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC14.4□□□□□ -0.1
NDUFA1O15239 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
NDUFA1O15239 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
NDUFA1O15239 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC14.4□□□□□ -0.1
NDUFA1O15239 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC14.4□□□□□ -0.1
NDUFA1O15239 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
NDUFA1O15239 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
NDUFA1O15239 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
NDUFA1O15239 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
NDUFA1O15239 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
NDUFA1O15239 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
NDUFA1O15239 VGF-203ENST00000611537 1622 ntTSL 5 BASIC14.4□□□□□ -0.1
NDUFA1O15239 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
NDUFA1O15239 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC14.4□□□□□ -0.1
NDUFA1O15239 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC14.39□□□□□ -0.11
NDUFA1O15239 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
NDUFA1O15239 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
NDUFA1O15239 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
NDUFA1O15239 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
NDUFA1O15239 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
NDUFA1O15239 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
NDUFA1O15239 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
NDUFA1O15239 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
NDUFA1O15239 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC14.39□□□□□ -0.11
NDUFA1O15239 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
NDUFA1O15239 AC009299.2-201ENST00000482477 511 ntBASIC14.39□□□□□ -0.11
NDUFA1O15239 MIR6724-1-201ENST00000616420 92 ntBASIC14.39□□□□□ -0.11
NDUFA1O15239 MIR6724-2-201ENST00000616483 92 ntBASIC14.39□□□□□ -0.11
NDUFA1O15239 MIR6724-4-201ENST00000617390 92 ntBASIC14.39□□□□□ -0.11
NDUFA1O15239 MIR6724-3-201ENST00000622482 92 ntBASIC14.39□□□□□ -0.11
NDUFA1O15239 AL117332.1-201ENST00000622628 974 ntBASIC14.39□□□□□ -0.11
NDUFA1O15239 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC14.39□□□□□ -0.11
NDUFA1O15239 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC14.39□□□□□ -0.11
NDUFA1O15239 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
NDUFA1O15239 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC14.39□□□□□ -0.11
NDUFA1O15239 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC14.39□□□□□ -0.11
NDUFA1O15239 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
NDUFA1O15239 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC14.39□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms