Protein–RNA interactions for Protein: A2RU48

SMCO3, Single-pass membrane and coiled-coil domain-containing protein 3, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO3A2RU48 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SMCO3A2RU48 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
SMCO3A2RU48 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC17.14■□□□□ 0.33
SMCO3A2RU48 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
SMCO3A2RU48 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC17.13■□□□□ 0.33
SMCO3A2RU48 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
SMCO3A2RU48 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SMCO3A2RU48 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
SMCO3A2RU48 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SMCO3A2RU48 CERS4-205ENST00000558331 1803 ntTSL 5 BASIC17.13■□□□□ 0.33
SMCO3A2RU48 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SMCO3A2RU48 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC17.13■□□□□ 0.33
SMCO3A2RU48 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC17.13■□□□□ 0.33
SMCO3A2RU48 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SMCO3A2RU48 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SMCO3A2RU48 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
SMCO3A2RU48 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
SMCO3A2RU48 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC17.13■□□□□ 0.33
SMCO3A2RU48 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SMCO3A2RU48 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
SMCO3A2RU48 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SMCO3A2RU48 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
SMCO3A2RU48 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SMCO3A2RU48 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SMCO3A2RU48 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC17.12■□□□□ 0.33
SMCO3A2RU48 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SMCO3A2RU48 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SMCO3A2RU48 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
SMCO3A2RU48 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
SMCO3A2RU48 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
SMCO3A2RU48 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC17.12■□□□□ 0.33
SMCO3A2RU48 AL031848.2-201ENST00000607670 837 ntBASIC17.12■□□□□ 0.33
SMCO3A2RU48 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SMCO3A2RU48 TUB-203ENST00000534099 1759 ntTSL 2 BASIC17.12■□□□□ 0.33
SMCO3A2RU48 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SMCO3A2RU48 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SMCO3A2RU48 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
SMCO3A2RU48 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SMCO3A2RU48 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
SMCO3A2RU48 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC17.12■□□□□ 0.33
SMCO3A2RU48 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC17.12■□□□□ 0.33
SMCO3A2RU48 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC17.11■□□□□ 0.33
SMCO3A2RU48 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC17.11■□□□□ 0.33
SMCO3A2RU48 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC17.11■□□□□ 0.33
SMCO3A2RU48 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
SMCO3A2RU48 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC17.11■□□□□ 0.33
SMCO3A2RU48 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
SMCO3A2RU48 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
SMCO3A2RU48 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
SMCO3A2RU48 AC103834.1-201ENST00000520383 144 ntBASIC17.11■□□□□ 0.33
SMCO3A2RU48 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
SMCO3A2RU48 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
SMCO3A2RU48 MCC-208ENST00000514701 2855 ntTSL 2 BASIC17.11■□□□□ 0.33
SMCO3A2RU48 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
SMCO3A2RU48 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC17.11■□□□□ 0.33
SMCO3A2RU48 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
SMCO3A2RU48 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SMCO3A2RU48 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
SMCO3A2RU48 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC17.1■□□□□ 0.33
SMCO3A2RU48 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
SMCO3A2RU48 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC17.1■□□□□ 0.33
SMCO3A2RU48 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC17.1■□□□□ 0.33
SMCO3A2RU48 LINC01521-201ENST00000504184 1943 ntBASIC17.1■□□□□ 0.33
SMCO3A2RU48 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
SMCO3A2RU48 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
SMCO3A2RU48 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC17.1■□□□□ 0.33
SMCO3A2RU48 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SMCO3A2RU48 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
SMCO3A2RU48 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
SMCO3A2RU48 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
SMCO3A2RU48 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
SMCO3A2RU48 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
SMCO3A2RU48 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SMCO3A2RU48 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
SMCO3A2RU48 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC17.09■□□□□ 0.33
SMCO3A2RU48 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
SMCO3A2RU48 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC17.09■□□□□ 0.33
SMCO3A2RU48 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
SMCO3A2RU48 BX664725.1-201ENST00000438252 379 ntBASIC17.09■□□□□ 0.33
SMCO3A2RU48 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC17.09■□□□□ 0.33
SMCO3A2RU48 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC17.09■□□□□ 0.33
SMCO3A2RU48 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SMCO3A2RU48 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
SMCO3A2RU48 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC17.09■□□□□ 0.33
SMCO3A2RU48 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC17.09■□□□□ 0.33
SMCO3A2RU48 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
SMCO3A2RU48 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC17.08■□□□□ 0.33
SMCO3A2RU48 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
SMCO3A2RU48 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
SMCO3A2RU48 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
SMCO3A2RU48 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
SMCO3A2RU48 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
SMCO3A2RU48 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
SMCO3A2RU48 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
SMCO3A2RU48 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
SMCO3A2RU48 AC009102.2-201ENST00000606772 1639 ntBASIC17.08■□□□□ 0.32
SMCO3A2RU48 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC17.08■□□□□ 0.32
SMCO3A2RU48 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
SMCO3A2RU48 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC17.08■□□□□ 0.32
SMCO3A2RU48 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC17.08■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms