Protein–RNA interactions for Protein: Q07988

YLR040C, Cell wall protein YLR040C, yeastyeast

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
YLR040CQ07988 UBP16YPL072W 1500 nt4.16□□□□□ -1.74
YLR040CQ07988 CDC15YAR019C 2925 nt4.16□□□□□ -1.74
YLR040CQ07988 ARG82YDR173C 1068 nt4.16□□□□□ -1.74
YLR040CQ07988 TFB3YDR460W 966 nt4.16□□□□□ -1.74
YLR040CQ07988 LPP1YDR503C 825 nt4.16□□□□□ -1.74
YLR040CQ07988 PRM8YGL053W 714 nt4.16□□□□□ -1.74
YLR040CQ07988 AML1YGR001C 747 nt4.16□□□□□ -1.74
YLR040CQ07988 TWF1YGR080W 999 nt4.16□□□□□ -1.74
YLR040CQ07988 YIL171W-AYIL171W-A 453 nt4.16□□□□□ -1.74
YLR040CQ07988 YJL220WYJL220W 453 nt4.16□□□□□ -1.74
YLR040CQ07988 YJR012CYJR012C 624 nt4.16□□□□□ -1.74
YLR040CQ07988 RPL40BYKR094C 387 nt4.16□□□□□ -1.74
YLR040CQ07988 IES3YLR052W 753 nt4.16□□□□□ -1.74
YLR040CQ07988 YLR297WYLR297W 390 nt4.16□□□□□ -1.74
YLR040CQ07988 BER1YLR412W 825 nt4.16□□□□□ -1.74
YLR040CQ07988 CAT5YOR125C 702 nt4.16□□□□□ -1.74
YLR040CQ07988 DAS1YJL149W 1992 nt4.16□□□□□ -1.74
YLR040CQ07988 PSY4YBL046W 1326 nt4.16□□□□□ -1.74
YLR040CQ07988 AGA1YNR044W 2178 nt4.16□□□□□ -1.74
YLR040CQ07988 MET4YNL103W 2019 nt4.16□□□□□ -1.74
YLR040CQ07988 YPL109CYPL109C 1974 nt4.15□□□□□ -1.74
YLR040CQ07988 PIG2YIL045W 1617 nt4.15□□□□□ -1.74
YLR040CQ07988 MSC2YDR205W 2175 nt4.15□□□□□ -1.75
YLR040CQ07988 snR7-SsnR7-S 179 nt4.15□□□□□ -1.75
YLR040CQ07988 RPL34AYER056C-A 366 nt4.15□□□□□ -1.75
YLR040CQ07988 VFA1YER128W 612 nt4.15□□□□□ -1.75
YLR040CQ07988 BET3YKR068C 582 nt4.15□□□□□ -1.75
YLR040CQ07988 YMR153C-AYMR153C-A 336 nt4.15□□□□□ -1.75
YLR040CQ07988 MRPL51YPR100W 423 nt4.15□□□□□ -1.75
YLR040CQ07988 SSB1YDL229W 1842 nt4.15□□□□□ -1.75
YLR040CQ07988 SPB4YFL002C 1821 nt4.15□□□□□ -1.75
YLR040CQ07988 XKS1YGR194C 1803 nt4.15□□□□□ -1.75
YLR040CQ07988 YVC1YOR087W 2028 nt4.15□□□□□ -1.75
YLR040CQ07988 HCM1YCR065W 1695 nt4.15□□□□□ -1.75
YLR040CQ07988 PDR5YOR153W 4536 nt4.14□□□□□ -1.75
YLR040CQ07988 GLN4YOR168W 2430 nt4.14□□□□□ -1.75
YLR040CQ07988 DHR2YKL078W 2208 nt4.14□□□□□ -1.75
YLR040CQ07988 TAF12YDR145W 1620 nt4.14□□□□□ -1.75
YLR040CQ07988 CUE3YGL110C 1875 nt4.14□□□□□ -1.75
YLR040CQ07988 YCR022CYCR022C 345 nt4.14□□□□□ -1.75
YLR040CQ07988 AIM7YDR063W 450 nt4.14□□□□□ -1.75
YLR040CQ07988 YDR381C-AYDR381C-A 345 nt4.14□□□□□ -1.75
YLR040CQ07988 YER046W-AYER046W-A 330 nt4.14□□□□□ -1.75
YLR040CQ07988 GET1YGL020C 708 nt4.14□□□□□ -1.75
YLR040CQ07988 SAE3YHR079C-A 276 nt4.14□□□□□ -1.75
YLR040CQ07988 YIL021C-AYIL021C-A 270 nt4.14□□□□□ -1.75
YLR040CQ07988 SDL1YIL167W 633 nt4.14□□□□□ -1.75
YLR040CQ07988 TPK3YKL166C 1197 nt4.14□□□□□ -1.75
YLR040CQ07988 YAL068W-AYAL068W-A 255 nt4.14□□□□□ -1.75
YLR040CQ07988 RRN9YMR270C 1098 nt4.14□□□□□ -1.75
YLR040CQ07988 YMR315WYMR315W 1050 nt4.14□□□□□ -1.75
YLR040CQ07988 PBI2YNL015W 228 nt4.14□□□□□ -1.75
YLR040CQ07988 YNR034W-AYNR034W-A 297 nt4.14□□□□□ -1.75
YLR040CQ07988 DDP1YOR163W 567 nt4.14□□□□□ -1.75
YLR040CQ07988 YOR186WYOR186W 435 nt4.14□□□□□ -1.75
YLR040CQ07988 snR24snR24 89 nt4.14□□□□□ -1.75
YLR040CQ07988 TIF4632YGL049C 2745 nt4.14□□□□□ -1.75
YLR040CQ07988 CDC40YDR364C 1368 nt4.14□□□□□ -1.75
YLR040CQ07988 CBF5YLR175W 1452 nt4.13□□□□□ -1.75
YLR040CQ07988 PRM1YNL279W 1986 nt4.13□□□□□ -1.75
YLR040CQ07988 ARX1YDR101C 1782 nt4.13□□□□□ -1.75
YLR040CQ07988 OLE1YGL055W 1533 nt4.13□□□□□ -1.75
YLR040CQ07988 PER1YCR044C 1074 nt4.13□□□□□ -1.75
YLR040CQ07988 YCR050CYCR050C 309 nt4.13□□□□□ -1.75
YLR040CQ07988 CDC50YCR094W 1176 nt4.13□□□□□ -1.75
YLR040CQ07988 RPL27BYDR471W 411 nt4.13□□□□□ -1.75
YLR040CQ07988 YER068C-AYER068C-A 432 nt4.13□□□□□ -1.75
YLR040CQ07988 RPS20YHL015W 366 nt4.13□□□□□ -1.75
YLR040CQ07988 YHR097CYHR097C 1101 nt4.13□□□□□ -1.75
YLR040CQ07988 YIL175WYIL175W 318 nt4.13□□□□□ -1.75
YLR040CQ07988 YBL010CYBL010C 843 nt4.13□□□□□ -1.75
YLR040CQ07988 EOS1YNL080C 1101 nt4.13□□□□□ -1.75
YLR040CQ07988 DCS2YOR173W 1062 nt4.13□□□□□ -1.75
YLR040CQ07988 INA17YPL099C 549 nt4.13□□□□□ -1.75
YLR040CQ07988 YBR062CYBR062C 543 nt4.13□□□□□ -1.75
YLR040CQ07988 YPR174CYPR174C 666 nt4.13□□□□□ -1.75
YLR040CQ07988 YCL022CYCL022C 516 nt4.13□□□□□ -1.75
YLR040CQ07988 MDR1YGR100W 2853 nt4.13□□□□□ -1.75
YLR040CQ07988 YJL049WYJL049W 1353 nt4.13□□□□□ -1.75
YLR040CQ07988 LYS2YBR115C 4179 nt4.13□□□□□ -1.75
YLR040CQ07988 MCP2YLR253W 1710 nt4.12□□□□□ -1.75
YLR040CQ07988 SWI3YJL176C 2478 nt4.12□□□□□ -1.75
YLR040CQ07988 NEL1YHR035W 1893 nt4.12□□□□□ -1.75
YLR040CQ07988 YCR013CYCR013C 648 nt4.12□□□□□ -1.75
YLR040CQ07988 RPA14YDR156W 414 nt4.12□□□□□ -1.75
YLR040CQ07988 COA3YJL062W-A 258 nt4.12□□□□□ -1.75
YLR040CQ07988 LSO1YJR005C-A 282 nt4.12□□□□□ -1.75
YLR040CQ07988 FBP1YLR377C 1047 nt4.12□□□□□ -1.75
YLR040CQ07988 ATP18YML081C-A 180 nt4.12□□□□□ -1.75
YLR040CQ07988 RPA43YOR340C 981 nt4.12□□□□□ -1.75
YLR040CQ07988 MRPS9YBR146W 837 nt4.12□□□□□ -1.75
YLR040CQ07988 OM14YBR230C 405 nt4.12□□□□□ -1.75
YLR040CQ07988 15S_rRNA15S_rRNA 1649 nt4.12□□□□□ -1.75
YLR040CQ07988 RTT109YLL002W 1311 nt4.12□□□□□ -1.75
YLR040CQ07988 ADP1YCR011C 3150 nt4.12□□□□□ -1.75
YLR040CQ07988 OPT2YPR194C 2634 nt4.11□□□□□ -1.75
YLR040CQ07988 PEP5YMR231W 3090 nt4.11□□□□□ -1.75
YLR040CQ07988 NCB2YDR397C 441 nt4.11□□□□□ -1.75
YLR040CQ07988 YOS1YER074W-A 258 nt4.11□□□□□ -1.75
YLR040CQ07988 PRE9YGR135W 777 nt4.11□□□□□ -1.75
Retrieved 100 of 7,029 protein–RNA pairs in 16.6 ms