Protein–RNA interactions for Protein: Q07807

PUF3, mRNA-binding protein PUF3, yeastyeast

Known RBP RIP-Chip data

Length 879 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PUF3Q07807 YPL119C-AYPL119C-A 264 nt4.87□□□□□ -1.63
PUF3Q07807 FEX2YPL279C 1128 nt4.87□□□□□ -1.63
PUF3Q07807 TUB3YML124C 1338 nt4.87□□□□□ -1.63
PUF3Q07807 LEU1YGL009C 2340 nt4.86□□□□□ -1.63
PUF3Q07807 RTC5YOR118W 1704 nt4.86□□□□□ -1.63
PUF3Q07807 SSB2YNL209W 1842 nt4.86□□□□□ -1.63
PUF3Q07807 SYP1YCR030C 2613 nt4.86□□□□□ -1.63
PUF3Q07807 MDL1YLR188W 2088 nt4.86□□□□□ -1.63
PUF3Q07807 CNL1YDR357C 369 nt4.86□□□□□ -1.63
PUF3Q07807 YEL045CYEL045C 426 nt4.86□□□□□ -1.63
PUF3Q07807 tM(CAU)Q1tM(CAU)Q1 76 nt4.86□□□□□ -1.63
PUF3Q07807 YGR025WYGR025W 303 nt4.86□□□□□ -1.63
PUF3Q07807 MIC26YGR235C 702 nt4.86□□□□□ -1.63
PUF3Q07807 SPC1YJR010C-A 285 nt4.86□□□□□ -1.63
PUF3Q07807 ATP18YML081C-A 180 nt4.86□□□□□ -1.63
PUF3Q07807 YBR090CYBR090C 369 nt4.86□□□□□ -1.63
PUF3Q07807 BIK1YCL029C 1323 nt4.86□□□□□ -1.63
PUF3Q07807 RAD16YBR114W 2373 nt4.86□□□□□ -1.63
PUF3Q07807 SWI3YJL176C 2478 nt4.86□□□□□ -1.63
PUF3Q07807 RXT3YDL076C 885 nt4.85□□□□□ -1.63
PUF3Q07807 YEL057CYEL057C 702 nt4.85□□□□□ -1.63
PUF3Q07807 YGR121W-AYGR121W-A 216 nt4.85□□□□□ -1.63
PUF3Q07807 PDR15YDR406W 4590 nt4.85□□□□□ -1.63
PUF3Q07807 NEL1YHR035W 1893 nt4.85□□□□□ -1.63 RIP-Chip
PUF3Q07807 YPL109CYPL109C 1974 nt4.85□□□□□ -1.63
PUF3Q07807 AKL1YBR059C 3327 nt4.84□□□□□ -1.63
PUF3Q07807 KRE2YDR483W 1329 nt4.84□□□□□ -1.63
PUF3Q07807 YDL152WYDL152W 366 nt4.84□□□□□ -1.63
PUF3Q07807 YHL037CYHL037C 402 nt4.84□□□□□ -1.63
PUF3Q07807 BNA1YJR025C 534 nt4.84□□□□□ -1.63
PUF3Q07807 AIM29YKR074W 468 nt4.84□□□□□ -1.63
PUF3Q07807 YMR315WYMR315W 1050 nt4.84□□□□□ -1.63
PUF3Q07807 YPR050CYPR050C 414 nt4.84□□□□□ -1.63
PUF3Q07807 CTP1YBR291C 900 nt4.84□□□□□ -1.63
PUF3Q07807 SAP4YGL229C 2457 nt4.84□□□□□ -1.64
PUF3Q07807 HRK1YOR267C 2280 nt4.84□□□□□ -1.64 RIP-Chip
PUF3Q07807 ALD3YMR169C 1521 nt4.83□□□□□ -1.64
PUF3Q07807 NAM9YNL137C 1461 nt4.83□□□□□ -1.64 RIP-Chip
PUF3Q07807 CEX1YOR112W 2286 nt4.83□□□□□ -1.64 RIP-Chip
PUF3Q07807 snR65snR65 100 nt4.83□□□□□ -1.64
PUF3Q07807 RPA14YDR156W 414 nt4.83□□□□□ -1.64
PUF3Q07807 RIP1YEL024W 648 nt4.83□□□□□ -1.64
PUF3Q07807 JAC1YGL018C 555 nt4.83□□□□□ -1.64
PUF3Q07807 RMR1YGL250W 726 nt4.83□□□□□ -1.64
PUF3Q07807 YGR228WYGR228W 345 nt4.83□□□□□ -1.64
PUF3Q07807 CFD1YIL003W 882 nt4.83□□□□□ -1.64
PUF3Q07807 COQ5YML110C 924 nt4.83□□□□□ -1.64
PUF3Q07807 PDR17YNL264C 1053 nt4.83□□□□□ -1.64
PUF3Q07807 OST2YOR103C 393 nt4.83□□□□□ -1.64
PUF3Q07807 YOP1YPR028W 543 nt4.83□□□□□ -1.64
PUF3Q07807 snR54snR54 86 nt4.83□□□□□ -1.64
PUF3Q07807 DSS1YMR287C 2910 nt4.83□□□□□ -1.64 RIP-Chip
PUF3Q07807 TDA7YNL176C 1911 nt4.83□□□□□ -1.64
PUF3Q07807 PGM2YMR105C 1710 nt4.83□□□□□ -1.64
PUF3Q07807 HCM1YCR065W 1695 nt4.83□□□□□ -1.64
PUF3Q07807 ERG5YMR015C 1617 nt4.83□□□□□ -1.64 RIP-Chip
PUF3Q07807 SSE2YBR169C 2082 nt4.82□□□□□ -1.64
PUF3Q07807 SEN54YPL083C 1404 nt4.82□□□□□ -1.64
PUF3Q07807 SSL1YLR005W 1386 nt4.82□□□□□ -1.64
PUF3Q07807 LAP3YNL239W 1365 nt4.82□□□□□ -1.64
PUF3Q07807 YER175W-AYER175W-A 165 nt4.82□□□□□ -1.64
PUF3Q07807 FRA2YGL220W 363 nt4.82□□□□□ -1.64
PUF3Q07807 YJL119CYJL119C 324 nt4.82□□□□□ -1.64
PUF3Q07807 RNH203YLR154C 333 nt4.82□□□□□ -1.64
PUF3Q07807 CTK3YML112W 891 nt4.82□□□□□ -1.64
PUF3Q07807 YBL055CYBL055C 1257 nt4.82□□□□□ -1.64
PUF3Q07807 ASI2YNL159C 870 nt4.82□□□□□ -1.64
PUF3Q07807 TAF14YPL129W 735 nt4.82□□□□□ -1.64
PUF3Q07807 KCC4YCL024W 3114 nt4.82□□□□□ -1.64
PUF3Q07807 SRP1YNL189W 1629 nt4.82□□□□□ -1.64
PUF3Q07807 CBF5YLR175W 1452 nt4.81□□□□□ -1.64
PUF3Q07807 PER1YCR044C 1074 nt4.81□□□□□ -1.64
PUF3Q07807 YDR545C-AYDR545C-A 480 nt4.81□□□□□ -1.64
PUF3Q07807 YEL077W-AYEL077W-A 483 nt4.81□□□□□ -1.64
PUF3Q07807 tK(CUU)CtK(CUU)C 73 nt4.81□□□□□ -1.64
PUF3Q07807 tK(CUU)D1tK(CUU)D1 73 nt4.81□□□□□ -1.64
PUF3Q07807 tK(CUU)D2tK(CUU)D2 73 nt4.81□□□□□ -1.64
PUF3Q07807 tK(CUU)E1tK(CUU)E1 73 nt4.81□□□□□ -1.64
PUF3Q07807 tK(CUU)E2tK(CUU)E2 73 nt4.81□□□□□ -1.64
PUF3Q07807 tK(CUU)FtK(CUU)F 73 nt4.81□□□□□ -1.64
PUF3Q07807 YER097WYER097W 330 nt4.81□□□□□ -1.64
PUF3Q07807 tK(CUU)G1tK(CUU)G1 73 nt4.81□□□□□ -1.64
PUF3Q07807 tK(CUU)G2tK(CUU)G2 73 nt4.81□□□□□ -1.64
PUF3Q07807 tK(CUU)G3tK(CUU)G3 73 nt4.81□□□□□ -1.64
PUF3Q07807 tK(CUU)ItK(CUU)I 73 nt4.81□□□□□ -1.64
PUF3Q07807 tK(CUU)JtK(CUU)J 73 nt4.81□□□□□ -1.64
PUF3Q07807 tK(CUU)KtK(CUU)K 73 nt4.81□□□□□ -1.64
PUF3Q07807 tK(CUU)MtK(CUU)M 73 nt4.81□□□□□ -1.64
PUF3Q07807 tK(CUU)PtK(CUU)P 73 nt4.81□□□□□ -1.64
PUF3Q07807 YER190C-BYER190C-B 483 nt4.81□□□□□ -1.64
PUF3Q07807 YFL068WYFL068W 483 nt4.81□□□□□ -1.64
PUF3Q07807 YGR296C-BYGR296C-B 483 nt4.81□□□□□ -1.64
PUF3Q07807 YHL050W-AYHL050W-A 483 nt4.81□□□□□ -1.64
PUF3Q07807 YHR219C-AYHR219C-A 483 nt4.81□□□□□ -1.64
PUF3Q07807 DFG10YIL049W 762 nt4.81□□□□□ -1.64
PUF3Q07807 YLL066W-AYLL066W-A 483 nt4.81□□□□□ -1.64
PUF3Q07807 YLL067W-AYLL067W-A 483 nt4.81□□□□□ -1.64
PUF3Q07807 YLR466C-AYLR466C-A 483 nt4.81□□□□□ -1.64
PUF3Q07807 YLR467C-AYLR467C-A 483 nt4.81□□□□□ -1.64
PUF3Q07807 GLO1YML004C 981 nt4.81□□□□□ -1.64
Retrieved 100 of 7,029 protein–RNA pairs in 17.7 ms