Protein–RNA interactions for Protein: Q8TDI0

CHD5, Chromodomain-helicase-DNA-binding protein 5, humanhuman

Predictions only

Length 1,954 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD5Q8TDI0 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC21.66■■□□□ 1.06
CHD5Q8TDI0 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
CHD5Q8TDI0 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC21.66■■□□□ 1.06
CHD5Q8TDI0 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC21.66■■□□□ 1.06
CHD5Q8TDI0 KRT18P20-201ENST00000548986 1279 ntBASIC21.66■■□□□ 1.06
CHD5Q8TDI0 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC21.66■■□□□ 1.06
CHD5Q8TDI0 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CHD5Q8TDI0 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
CHD5Q8TDI0 WWOX-218ENST00000627394 894 ntTSL 5 BASIC21.66■■□□□ 1.06
CHD5Q8TDI0 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CHD5Q8TDI0 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
CHD5Q8TDI0 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC21.66■■□□□ 1.06
CHD5Q8TDI0 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CHD5Q8TDI0 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC21.65■■□□□ 1.06
CHD5Q8TDI0 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
CHD5Q8TDI0 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC21.65■■□□□ 1.06
CHD5Q8TDI0 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CHD5Q8TDI0 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC21.65■■□□□ 1.06
CHD5Q8TDI0 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC21.65■■□□□ 1.06
CHD5Q8TDI0 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC21.65■■□□□ 1.06
CHD5Q8TDI0 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
CHD5Q8TDI0 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC21.65■■□□□ 1.06
CHD5Q8TDI0 SERP1-208ENST00000491660 830 ntTSL 2 BASIC21.65■■□□□ 1.06
CHD5Q8TDI0 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC21.65■■□□□ 1.06
CHD5Q8TDI0 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC21.65■■□□□ 1.06
CHD5Q8TDI0 AC022517.1-201ENST00000592429 346 ntBASIC21.65■■□□□ 1.06
CHD5Q8TDI0 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
CHD5Q8TDI0 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
CHD5Q8TDI0 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
CHD5Q8TDI0 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
CHD5Q8TDI0 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
CHD5Q8TDI0 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC21.64■■□□□ 1.05
CHD5Q8TDI0 TESC-206ENST00000541210 936 ntTSL 3 BASIC21.64■■□□□ 1.05
CHD5Q8TDI0 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC21.64■■□□□ 1.05
CHD5Q8TDI0 UBE2DNL-204ENST00000602536 740 ntBASIC21.64■■□□□ 1.05
CHD5Q8TDI0 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CHD5Q8TDI0 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
CHD5Q8TDI0 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC21.64■■□□□ 1.05
CHD5Q8TDI0 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CHD5Q8TDI0 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CHD5Q8TDI0 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
CHD5Q8TDI0 UQCRFS1P1-201ENST00000435169 820 ntBASIC21.63■■□□□ 1.05
CHD5Q8TDI0 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC21.63■■□□□ 1.05
CHD5Q8TDI0 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC21.63■■□□□ 1.05
CHD5Q8TDI0 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CHD5Q8TDI0 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CHD5Q8TDI0 AC137761.2-201ENST00000561729 223 ntBASIC21.63■■□□□ 1.05
CHD5Q8TDI0 AC145350.3-201ENST00000569033 163 ntBASIC21.63■■□□□ 1.05
CHD5Q8TDI0 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC21.63■■□□□ 1.05
CHD5Q8TDI0 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CHD5Q8TDI0 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC21.62■■□□□ 1.05
CHD5Q8TDI0 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC21.62■■□□□ 1.05
CHD5Q8TDI0 RARG-204ENST00000543726 1779 ntTSL 2 BASIC21.62■■□□□ 1.05
CHD5Q8TDI0 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC21.62■■□□□ 1.05
CHD5Q8TDI0 ME2-206ENST00000638410 2289 ntTSL 5 BASIC21.62■■□□□ 1.05
CHD5Q8TDI0 ME2-210ENST00000639255 2262 ntTSL 5 BASIC21.62■■□□□ 1.05
CHD5Q8TDI0 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CHD5Q8TDI0 DBI-210ENST00000542275 757 ntTSL 5 BASIC21.62■■□□□ 1.05
CHD5Q8TDI0 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC21.62■■□□□ 1.05
CHD5Q8TDI0 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC21.62■■□□□ 1.05
CHD5Q8TDI0 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC21.62■■□□□ 1.05
CHD5Q8TDI0 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
CHD5Q8TDI0 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
CHD5Q8TDI0 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
CHD5Q8TDI0 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CHD5Q8TDI0 STX7-201ENST00000367937 1090 ntTSL 5 BASIC21.61■■□□□ 1.05
CHD5Q8TDI0 NTF6G-201ENST00000591094 616 ntBASIC21.61■■□□□ 1.05
CHD5Q8TDI0 AC053503.5-201ENST00000601508 636 ntBASIC21.61■■□□□ 1.05
CHD5Q8TDI0 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CHD5Q8TDI0 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CHD5Q8TDI0 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
CHD5Q8TDI0 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC21.61■■□□□ 1.05
CHD5Q8TDI0 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC21.61■■□□□ 1.05
CHD5Q8TDI0 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CHD5Q8TDI0 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CHD5Q8TDI0 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CHD5Q8TDI0 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC21.61■■□□□ 1.05
CHD5Q8TDI0 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
CHD5Q8TDI0 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
CHD5Q8TDI0 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
CHD5Q8TDI0 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CHD5Q8TDI0 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CHD5Q8TDI0 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
CHD5Q8TDI0 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CHD5Q8TDI0 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CHD5Q8TDI0 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CHD5Q8TDI0 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC21.6■■□□□ 1.05
CHD5Q8TDI0 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CHD5Q8TDI0 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
CHD5Q8TDI0 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CHD5Q8TDI0 NARF-205ENST00000412079 1760 ntTSL 5 BASIC21.6■■□□□ 1.05
CHD5Q8TDI0 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC21.6■■□□□ 1.05
CHD5Q8TDI0 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CHD5Q8TDI0 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CHD5Q8TDI0 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC21.59■■□□□ 1.05
CHD5Q8TDI0 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CHD5Q8TDI0 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
CHD5Q8TDI0 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CHD5Q8TDI0 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CHD5Q8TDI0 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC21.59■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 16.1 ms