Protein–RNA interactions for Protein: Q8N2S1

LTBP4, Latent-transforming growth factor beta-binding protein 4, humanhuman

Predictions only

Length 1,624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4Q8N2S1 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC30.21■■■□□ 2.43
LTBP4Q8N2S1 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC30.21■■■□□ 2.43
LTBP4Q8N2S1 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC30.21■■■□□ 2.43
LTBP4Q8N2S1 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC30.2■■■□□ 2.43
LTBP4Q8N2S1 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC30.2■■■□□ 2.43
LTBP4Q8N2S1 AC142086.6-201ENST00000621154 1765 ntBASIC30.2■■■□□ 2.43
LTBP4Q8N2S1 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.43
LTBP4Q8N2S1 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC30.2■■■□□ 2.43
LTBP4Q8N2S1 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC30.2■■■□□ 2.43
LTBP4Q8N2S1 AL591742.1-201ENST00000604433 565 ntBASIC30.2■■■□□ 2.43
LTBP4Q8N2S1 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC30.2■■■□□ 2.43
LTBP4Q8N2S1 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.42
LTBP4Q8N2S1 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC30.2■■■□□ 2.42
LTBP4Q8N2S1 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.42
LTBP4Q8N2S1 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC30.19■■■□□ 2.42
LTBP4Q8N2S1 RBM17P2-201ENST00000616397 1405 ntBASIC30.19■■■□□ 2.42
LTBP4Q8N2S1 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC30.19■■■□□ 2.42
LTBP4Q8N2S1 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC30.19■■■□□ 2.42
LTBP4Q8N2S1 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC30.19■■■□□ 2.42
LTBP4Q8N2S1 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC30.19■■■□□ 2.42
LTBP4Q8N2S1 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC30.19■■■□□ 2.42
LTBP4Q8N2S1 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC30.19■■■□□ 2.42
LTBP4Q8N2S1 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC30.19■■■□□ 2.42
LTBP4Q8N2S1 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC30.18■■■□□ 2.42
LTBP4Q8N2S1 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
LTBP4Q8N2S1 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC30.18■■■□□ 2.42
LTBP4Q8N2S1 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC30.18■■■□□ 2.42
LTBP4Q8N2S1 NME3-204ENST00000563498 920 ntTSL 2 BASIC30.18■■■□□ 2.42
LTBP4Q8N2S1 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC30.18■■■□□ 2.42
LTBP4Q8N2S1 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC30.18■■■□□ 2.42
LTBP4Q8N2S1 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
LTBP4Q8N2S1 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC30.18■■■□□ 2.42
LTBP4Q8N2S1 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
LTBP4Q8N2S1 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC30.18■■■□□ 2.42
LTBP4Q8N2S1 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC30.18■■■□□ 2.42
LTBP4Q8N2S1 CEBPA-AS1-201ENST00000592982 2198 ntBASIC30.17■■■□□ 2.42
LTBP4Q8N2S1 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC30.17■■■□□ 2.42
LTBP4Q8N2S1 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC30.17■■■□□ 2.42
LTBP4Q8N2S1 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC30.17■■■□□ 2.42
LTBP4Q8N2S1 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
LTBP4Q8N2S1 SOX15-203ENST00000570788 1093 ntBASIC30.17■■■□□ 2.42
LTBP4Q8N2S1 AC053503.5-201ENST00000601508 636 ntBASIC30.17■■■□□ 2.42
LTBP4Q8N2S1 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC30.17■■■□□ 2.42
LTBP4Q8N2S1 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC30.17■■■□□ 2.42
LTBP4Q8N2S1 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC30.17■■■□□ 2.42
LTBP4Q8N2S1 P4HB-223ENST00000576390 439 ntTSL 4 BASIC30.16■■■□□ 2.42
LTBP4Q8N2S1 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
LTBP4Q8N2S1 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
LTBP4Q8N2S1 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC30.15■■■□□ 2.42
LTBP4Q8N2S1 CRAT-202ENST00000393384 973 ntTSL 2 BASIC30.15■■■□□ 2.42
LTBP4Q8N2S1 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC30.15■■■□□ 2.42
LTBP4Q8N2S1 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC30.15■■■□□ 2.42
LTBP4Q8N2S1 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC30.15■■■□□ 2.42
LTBP4Q8N2S1 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
LTBP4Q8N2S1 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC30.15■■■□□ 2.42
LTBP4Q8N2S1 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC30.15■■■□□ 2.42
LTBP4Q8N2S1 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC30.15■■■□□ 2.42
LTBP4Q8N2S1 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC30.15■■■□□ 2.42
LTBP4Q8N2S1 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC30.15■■■□□ 2.42
LTBP4Q8N2S1 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC30.15■■■□□ 2.42
LTBP4Q8N2S1 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC30.15■■■□□ 2.42
LTBP4Q8N2S1 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
LTBP4Q8N2S1 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
LTBP4Q8N2S1 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
LTBP4Q8N2S1 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC30.14■■■□□ 2.42
LTBP4Q8N2S1 AC092368.3-202ENST00000574180 1591 ntBASIC30.14■■■□□ 2.42
LTBP4Q8N2S1 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC30.14■■■□□ 2.42
LTBP4Q8N2S1 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
LTBP4Q8N2S1 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
LTBP4Q8N2S1 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC30.14■■■□□ 2.42
LTBP4Q8N2S1 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC30.14■■■□□ 2.42
LTBP4Q8N2S1 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC30.14■■■□□ 2.42
LTBP4Q8N2S1 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC30.14■■■□□ 2.41
LTBP4Q8N2S1 SERF2-207ENST00000409614 582 ntTSL 2 BASIC30.14■■■□□ 2.41
LTBP4Q8N2S1 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC30.14■■■□□ 2.41
LTBP4Q8N2S1 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC30.14■■■□□ 2.41
LTBP4Q8N2S1 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC30.14■■■□□ 2.41
LTBP4Q8N2S1 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.41
LTBP4Q8N2S1 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC30.14■■■□□ 2.41
LTBP4Q8N2S1 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC30.13■■■□□ 2.41
LTBP4Q8N2S1 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC30.13■■■□□ 2.41
LTBP4Q8N2S1 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
LTBP4Q8N2S1 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
LTBP4Q8N2S1 AL355472.2-201ENST00000422958 438 ntBASIC30.13■■■□□ 2.41
LTBP4Q8N2S1 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC30.13■■■□□ 2.41
LTBP4Q8N2S1 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC30.13■■■□□ 2.41
LTBP4Q8N2S1 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC30.13■■■□□ 2.41
LTBP4Q8N2S1 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC30.13■■■□□ 2.41
LTBP4Q8N2S1 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC30.13■■■□□ 2.41
LTBP4Q8N2S1 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC30.13■■■□□ 2.41
LTBP4Q8N2S1 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC30.12■■■□□ 2.41
LTBP4Q8N2S1 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC30.12■■■□□ 2.41
LTBP4Q8N2S1 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC30.12■■■□□ 2.41
LTBP4Q8N2S1 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC30.12■■■□□ 2.41
LTBP4Q8N2S1 USF2-205ENST00000594064 1179 ntTSL 2 BASIC30.12■■■□□ 2.41
LTBP4Q8N2S1 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC30.12■■■□□ 2.41
LTBP4Q8N2S1 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
LTBP4Q8N2S1 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
LTBP4Q8N2S1 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC30.12■■■□□ 2.41
LTBP4Q8N2S1 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC30.11■■■□□ 2.41
Retrieved 100 of 98,524 protein–RNA pairs in 116.1 ms