Protein–RNA interactions for Protein: A0A0A0MS06

TRBV23-1, T-cell receptor beta variable 23-1 (non-functional) (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV23-1A0A0A0MS06 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
TRBV23-1A0A0A0MS06 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC17.88■□□□□ 0.45
TRBV23-1A0A0A0MS06 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRBV23-1A0A0A0MS06 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRBV23-1A0A0A0MS06 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRBV23-1A0A0A0MS06 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC17.88■□□□□ 0.45
TRBV23-1A0A0A0MS06 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRBV23-1A0A0A0MS06 EML3-217ENST00000531557 2509 ntTSL 5 BASIC17.88■□□□□ 0.45
TRBV23-1A0A0A0MS06 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRBV23-1A0A0A0MS06 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
TRBV23-1A0A0A0MS06 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC17.88■□□□□ 0.45
TRBV23-1A0A0A0MS06 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRBV23-1A0A0A0MS06 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRBV23-1A0A0A0MS06 NME4-202ENST00000382940 766 ntTSL 3 BASIC17.88■□□□□ 0.45
TRBV23-1A0A0A0MS06 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
TRBV23-1A0A0A0MS06 AC012414.1-201ENST00000556676 535 ntBASIC17.88■□□□□ 0.45
TRBV23-1A0A0A0MS06 NME4-211ENST00000620944 1193 ntTSL 2 BASIC17.88■□□□□ 0.45
TRBV23-1A0A0A0MS06 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
TRBV23-1A0A0A0MS06 MPST-204ENST00000404393 1329 ntTSL 5 BASIC17.88■□□□□ 0.45
TRBV23-1A0A0A0MS06 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRBV23-1A0A0A0MS06 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC17.88■□□□□ 0.45
TRBV23-1A0A0A0MS06 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
TRBV23-1A0A0A0MS06 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
TRBV23-1A0A0A0MS06 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
TRBV23-1A0A0A0MS06 AC139530.1-201ENST00000575312 1977 ntBASIC17.88■□□□□ 0.45
TRBV23-1A0A0A0MS06 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRBV23-1A0A0A0MS06 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
TRBV23-1A0A0A0MS06 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC17.87■□□□□ 0.45
TRBV23-1A0A0A0MS06 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRBV23-1A0A0A0MS06 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
TRBV23-1A0A0A0MS06 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC17.87■□□□□ 0.45
TRBV23-1A0A0A0MS06 GUK1-205ENST00000366722 850 ntTSL 3 BASIC17.87■□□□□ 0.45
TRBV23-1A0A0A0MS06 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC17.87■□□□□ 0.45
TRBV23-1A0A0A0MS06 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC17.87■□□□□ 0.45
TRBV23-1A0A0A0MS06 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC17.87■□□□□ 0.45
TRBV23-1A0A0A0MS06 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC17.87■□□□□ 0.45
TRBV23-1A0A0A0MS06 SMUG1P1-201ENST00000590640 811 ntBASIC17.87■□□□□ 0.45
TRBV23-1A0A0A0MS06 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC17.87■□□□□ 0.45
TRBV23-1A0A0A0MS06 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC17.87■□□□□ 0.45
TRBV23-1A0A0A0MS06 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC17.87■□□□□ 0.45
TRBV23-1A0A0A0MS06 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRBV23-1A0A0A0MS06 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRBV23-1A0A0A0MS06 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRBV23-1A0A0A0MS06 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TRBV23-1A0A0A0MS06 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRBV23-1A0A0A0MS06 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC17.86■□□□□ 0.45
TRBV23-1A0A0A0MS06 AC233723.2-201ENST00000623798 2106 ntBASIC17.86■□□□□ 0.45
TRBV23-1A0A0A0MS06 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRBV23-1A0A0A0MS06 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC17.86■□□□□ 0.45
TRBV23-1A0A0A0MS06 AK1-201ENST00000223836 736 ntTSL 3 BASIC17.86■□□□□ 0.45
TRBV23-1A0A0A0MS06 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRBV23-1A0A0A0MS06 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TRBV23-1A0A0A0MS06 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRBV23-1A0A0A0MS06 ZNRF2P3-201ENST00000424200 374 ntBASIC17.86■□□□□ 0.45
TRBV23-1A0A0A0MS06 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TRBV23-1A0A0A0MS06 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
TRBV23-1A0A0A0MS06 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC17.86■□□□□ 0.45
TRBV23-1A0A0A0MS06 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC17.86■□□□□ 0.45
TRBV23-1A0A0A0MS06 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TRBV23-1A0A0A0MS06 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
TRBV23-1A0A0A0MS06 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRBV23-1A0A0A0MS06 LINC00526-201ENST00000581067 1875 ntBASIC17.86■□□□□ 0.45
TRBV23-1A0A0A0MS06 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TRBV23-1A0A0A0MS06 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC17.86■□□□□ 0.45
TRBV23-1A0A0A0MS06 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
TRBV23-1A0A0A0MS06 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRBV23-1A0A0A0MS06 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRBV23-1A0A0A0MS06 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRBV23-1A0A0A0MS06 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
TRBV23-1A0A0A0MS06 MIR935-201ENST00000401179 91 ntBASIC17.85■□□□□ 0.45
TRBV23-1A0A0A0MS06 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRBV23-1A0A0A0MS06 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC17.85■□□□□ 0.45
TRBV23-1A0A0A0MS06 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC17.85■□□□□ 0.45
TRBV23-1A0A0A0MS06 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRBV23-1A0A0A0MS06 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRBV23-1A0A0A0MS06 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
TRBV23-1A0A0A0MS06 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC17.85■□□□□ 0.45
TRBV23-1A0A0A0MS06 AC242852.2-201ENST00000615738 1807 ntBASIC17.85■□□□□ 0.45
TRBV23-1A0A0A0MS06 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TRBV23-1A0A0A0MS06 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
TRBV23-1A0A0A0MS06 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
TRBV23-1A0A0A0MS06 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRBV23-1A0A0A0MS06 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
TRBV23-1A0A0A0MS06 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TRBV23-1A0A0A0MS06 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRBV23-1A0A0A0MS06 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRBV23-1A0A0A0MS06 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC17.84■□□□□ 0.45
TRBV23-1A0A0A0MS06 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRBV23-1A0A0A0MS06 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRBV23-1A0A0A0MS06 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRBV23-1A0A0A0MS06 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC17.84■□□□□ 0.45
TRBV23-1A0A0A0MS06 LGR4-203ENST00000480977 492 ntTSL 2 BASIC17.84■□□□□ 0.45
TRBV23-1A0A0A0MS06 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC17.84■□□□□ 0.45
TRBV23-1A0A0A0MS06 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC17.84■□□□□ 0.45
TRBV23-1A0A0A0MS06 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TRBV23-1A0A0A0MS06 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRBV23-1A0A0A0MS06 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRBV23-1A0A0A0MS06 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TRBV23-1A0A0A0MS06 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
TRBV23-1A0A0A0MS06 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms