Protein–RNA interactions for Protein: Q8IYR6

TMEFF1, Tomoregulin-1, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1Q8IYR6 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
TMEFF1Q8IYR6 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC21.27■■□□□ 1
TMEFF1Q8IYR6 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC21.27■■□□□ 1
TMEFF1Q8IYR6 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
TMEFF1Q8IYR6 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
TMEFF1Q8IYR6 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC21.27■■□□□ 1
TMEFF1Q8IYR6 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC21.27■■□□□ 1
TMEFF1Q8IYR6 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC21.27■■□□□ 1
TMEFF1Q8IYR6 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC21.27■■□□□ 1
TMEFF1Q8IYR6 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
TMEFF1Q8IYR6 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
TMEFF1Q8IYR6 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC21.27■■□□□ 1
TMEFF1Q8IYR6 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC21.27■■□□□ 1
TMEFF1Q8IYR6 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC21.27■■□□□ 1
TMEFF1Q8IYR6 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC21.27■■□□□ 1
TMEFF1Q8IYR6 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC21.27■■□□□ 1
TMEFF1Q8IYR6 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC21.27■■□□□ 1
TMEFF1Q8IYR6 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC21.27■■□□□ 1
TMEFF1Q8IYR6 SLC7A5P1-201ENST00000568957 537 ntBASIC21.27■■□□□ 1
TMEFF1Q8IYR6 ITM2C-210ENST00000620962 501 ntBASIC21.27■■□□□ 1
TMEFF1Q8IYR6 MARS-234ENST00000630571 216 ntTSL 5 BASIC21.27■■□□□ 1
TMEFF1Q8IYR6 MARS-235ENST00000630803 183 ntTSL 3 BASIC21.27■■□□□ 1
TMEFF1Q8IYR6 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
TMEFF1Q8IYR6 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC21.26■□□□□ 0.99
TMEFF1Q8IYR6 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
TMEFF1Q8IYR6 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC21.26■□□□□ 0.99
TMEFF1Q8IYR6 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
TMEFF1Q8IYR6 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC21.26■□□□□ 0.99
TMEFF1Q8IYR6 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TMEFF1Q8IYR6 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TMEFF1Q8IYR6 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC21.26■□□□□ 0.99
TMEFF1Q8IYR6 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
TMEFF1Q8IYR6 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
TMEFF1Q8IYR6 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
TMEFF1Q8IYR6 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TMEFF1Q8IYR6 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC21.25■□□□□ 0.99
TMEFF1Q8IYR6 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
TMEFF1Q8IYR6 AC093787.1-201ENST00000450396 207 ntBASIC21.25■□□□□ 0.99
TMEFF1Q8IYR6 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC21.25■□□□□ 0.99
TMEFF1Q8IYR6 EEF1DP3-203ENST00000566025 782 ntBASIC21.25■□□□□ 0.99
TMEFF1Q8IYR6 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC21.25■□□□□ 0.99
TMEFF1Q8IYR6 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TMEFF1Q8IYR6 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TMEFF1Q8IYR6 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC21.25■□□□□ 0.99
TMEFF1Q8IYR6 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
TMEFF1Q8IYR6 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TMEFF1Q8IYR6 AC092068.2-201ENST00000590491 1708 ntBASIC21.24■□□□□ 0.99
TMEFF1Q8IYR6 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
TMEFF1Q8IYR6 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
TMEFF1Q8IYR6 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC21.24■□□□□ 0.99
TMEFF1Q8IYR6 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC21.24■□□□□ 0.99
TMEFF1Q8IYR6 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
TMEFF1Q8IYR6 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC21.24■□□□□ 0.99
TMEFF1Q8IYR6 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TMEFF1Q8IYR6 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC21.24■□□□□ 0.99
TMEFF1Q8IYR6 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC21.24■□□□□ 0.99
TMEFF1Q8IYR6 AC016405.3-201ENST00000607710 860 ntBASIC21.24■□□□□ 0.99
TMEFF1Q8IYR6 AC008694.1-202ENST00000636953 945 ntBASIC21.24■□□□□ 0.99
TMEFF1Q8IYR6 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC21.24■□□□□ 0.99
TMEFF1Q8IYR6 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TMEFF1Q8IYR6 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TMEFF1Q8IYR6 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TMEFF1Q8IYR6 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC21.23■□□□□ 0.99
TMEFF1Q8IYR6 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
TMEFF1Q8IYR6 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC21.23■□□□□ 0.99
TMEFF1Q8IYR6 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TMEFF1Q8IYR6 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
TMEFF1Q8IYR6 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TMEFF1Q8IYR6 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TMEFF1Q8IYR6 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC21.23■□□□□ 0.99
TMEFF1Q8IYR6 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
TMEFF1Q8IYR6 AC053503.5-201ENST00000601508 636 ntBASIC21.23■□□□□ 0.99
TMEFF1Q8IYR6 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC21.23■□□□□ 0.99
TMEFF1Q8IYR6 OR10C1-204ENST00000622521 1039 ntBASIC21.23■□□□□ 0.99
TMEFF1Q8IYR6 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC21.23■□□□□ 0.99
TMEFF1Q8IYR6 LINC00526-201ENST00000581067 1875 ntBASIC21.23■□□□□ 0.99
TMEFF1Q8IYR6 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
TMEFF1Q8IYR6 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC21.23■□□□□ 0.99
TMEFF1Q8IYR6 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TMEFF1Q8IYR6 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC21.22■□□□□ 0.99
TMEFF1Q8IYR6 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
TMEFF1Q8IYR6 PRORSD1P-201ENST00000295112 541 ntBASIC21.22■□□□□ 0.99
TMEFF1Q8IYR6 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
TMEFF1Q8IYR6 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC21.22■□□□□ 0.99
TMEFF1Q8IYR6 AL034346.1-201ENST00000568244 1277 ntBASIC21.22■□□□□ 0.99
TMEFF1Q8IYR6 PLLP-204ENST00000569059 665 ntTSL 3 BASIC21.22■□□□□ 0.99
TMEFF1Q8IYR6 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC21.22■□□□□ 0.99
TMEFF1Q8IYR6 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC21.22■□□□□ 0.99
TMEFF1Q8IYR6 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
TMEFF1Q8IYR6 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
TMEFF1Q8IYR6 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
TMEFF1Q8IYR6 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC21.22■□□□□ 0.99
TMEFF1Q8IYR6 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC21.22■□□□□ 0.99
TMEFF1Q8IYR6 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC21.22■□□□□ 0.99
TMEFF1Q8IYR6 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC21.22■□□□□ 0.99
TMEFF1Q8IYR6 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC21.21■□□□□ 0.99
TMEFF1Q8IYR6 CASK-201ENST00000378154 2494 ntTSL 5 BASIC21.21■□□□□ 0.99
TMEFF1Q8IYR6 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
TMEFF1Q8IYR6 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC21.21■□□□□ 0.99
TMEFF1Q8IYR6 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC21.21■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms