Protein–RNA interactions for Protein: Q8HWS3

RFX6, DNA-binding protein RFX6, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX6Q8HWS3 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC22.17■■□□□ 1.14
RFX6Q8HWS3 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC22.17■■□□□ 1.14
RFX6Q8HWS3 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
RFX6Q8HWS3 AC008764.7-201ENST00000593779 1081 ntBASIC22.17■■□□□ 1.14
RFX6Q8HWS3 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
RFX6Q8HWS3 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
RFX6Q8HWS3 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
RFX6Q8HWS3 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC22.17■■□□□ 1.14
RFX6Q8HWS3 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
RFX6Q8HWS3 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC22.17■■□□□ 1.14
RFX6Q8HWS3 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC22.16■■□□□ 1.14
RFX6Q8HWS3 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
RFX6Q8HWS3 Z98882.1-201ENST00000622160 2253 ntBASIC22.16■■□□□ 1.14
RFX6Q8HWS3 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
RFX6Q8HWS3 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
RFX6Q8HWS3 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC22.16■■□□□ 1.14
RFX6Q8HWS3 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
RFX6Q8HWS3 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
RFX6Q8HWS3 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC22.16■■□□□ 1.14
RFX6Q8HWS3 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC22.16■■□□□ 1.14
RFX6Q8HWS3 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
RFX6Q8HWS3 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
RFX6Q8HWS3 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
RFX6Q8HWS3 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
RFX6Q8HWS3 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
RFX6Q8HWS3 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC22.15■■□□□ 1.14
RFX6Q8HWS3 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC22.15■■□□□ 1.14
RFX6Q8HWS3 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC22.15■■□□□ 1.14
RFX6Q8HWS3 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC22.15■■□□□ 1.14
RFX6Q8HWS3 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
RFX6Q8HWS3 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC22.15■■□□□ 1.14
RFX6Q8HWS3 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
RFX6Q8HWS3 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
RFX6Q8HWS3 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
RFX6Q8HWS3 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC22.14■■□□□ 1.13
RFX6Q8HWS3 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC22.14■■□□□ 1.13
RFX6Q8HWS3 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
RFX6Q8HWS3 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.13
RFX6Q8HWS3 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
RFX6Q8HWS3 USP48-205ENST00000421625 2818 ntTSL 2 BASIC22.14■■□□□ 1.13
RFX6Q8HWS3 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC22.14■■□□□ 1.13
RFX6Q8HWS3 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC22.14■■□□□ 1.13
RFX6Q8HWS3 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC22.14■■□□□ 1.13
RFX6Q8HWS3 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC22.13■■□□□ 1.13
RFX6Q8HWS3 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
RFX6Q8HWS3 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
RFX6Q8HWS3 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC22.13■■□□□ 1.13
RFX6Q8HWS3 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC22.13■■□□□ 1.13
RFX6Q8HWS3 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC22.13■■□□□ 1.13
RFX6Q8HWS3 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
RFX6Q8HWS3 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC22.13■■□□□ 1.13
RFX6Q8HWS3 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
RFX6Q8HWS3 AC133561.4-201ENST00000566112 224 ntBASIC22.13■■□□□ 1.13
RFX6Q8HWS3 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
RFX6Q8HWS3 GRAMD4P4-201ENST00000613563 1115 ntBASIC22.13■■□□□ 1.13
RFX6Q8HWS3 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
RFX6Q8HWS3 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC22.13■■□□□ 1.13
RFX6Q8HWS3 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC22.13■■□□□ 1.13
RFX6Q8HWS3 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
RFX6Q8HWS3 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
RFX6Q8HWS3 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
RFX6Q8HWS3 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC22.13■■□□□ 1.13
RFX6Q8HWS3 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
RFX6Q8HWS3 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC22.12■■□□□ 1.13
RFX6Q8HWS3 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC22.12■■□□□ 1.13
RFX6Q8HWS3 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
RFX6Q8HWS3 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
RFX6Q8HWS3 AC099791.1-201ENST00000416440 715 ntBASIC22.12■■□□□ 1.13
RFX6Q8HWS3 IGHV3-19-201ENST00000521488 291 ntBASIC22.12■■□□□ 1.13
RFX6Q8HWS3 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC22.12■■□□□ 1.13
RFX6Q8HWS3 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC22.12■■□□□ 1.13
RFX6Q8HWS3 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC22.12■■□□□ 1.13
RFX6Q8HWS3 SMUG1P1-201ENST00000590640 811 ntBASIC22.12■■□□□ 1.13
RFX6Q8HWS3 AC106739.1-201ENST00000617035 715 ntBASIC22.12■■□□□ 1.13
RFX6Q8HWS3 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
RFX6Q8HWS3 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC22.12■■□□□ 1.13
RFX6Q8HWS3 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
RFX6Q8HWS3 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
RFX6Q8HWS3 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
RFX6Q8HWS3 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
RFX6Q8HWS3 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC22.11■■□□□ 1.13
RFX6Q8HWS3 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
RFX6Q8HWS3 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
RFX6Q8HWS3 GRAMD4P2-201ENST00000423297 1097 ntBASIC22.11■■□□□ 1.13
RFX6Q8HWS3 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC22.11■■□□□ 1.13
RFX6Q8HWS3 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC22.11■■□□□ 1.13
RFX6Q8HWS3 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC22.11■■□□□ 1.13
RFX6Q8HWS3 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC22.11■■□□□ 1.13
RFX6Q8HWS3 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
RFX6Q8HWS3 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
RFX6Q8HWS3 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
RFX6Q8HWS3 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC22.11■■□□□ 1.13
RFX6Q8HWS3 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC22.11■■□□□ 1.13
RFX6Q8HWS3 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC22.11■■□□□ 1.13
RFX6Q8HWS3 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
RFX6Q8HWS3 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC22.1■■□□□ 1.13
RFX6Q8HWS3 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
RFX6Q8HWS3 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
RFX6Q8HWS3 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
RFX6Q8HWS3 AC110285.6-201ENST00000617652 491 ntBASIC22.1■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms