Protein–RNA interactions for Protein: Q5VVM6

CCDC30, Coiled-coil domain-containing protein 30, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC30Q5VVM6 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
CCDC30Q5VVM6 AC016769.1-201ENST00000409132 1010 ntBASIC27.3■■□□□ 1.96
CCDC30Q5VVM6 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC27.3■■□□□ 1.96
CCDC30Q5VVM6 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC27.29■■□□□ 1.96
CCDC30Q5VVM6 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC27.29■■□□□ 1.96
CCDC30Q5VVM6 AC004911.1-201ENST00000416316 871 ntBASIC27.29■■□□□ 1.96
CCDC30Q5VVM6 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC27.29■■□□□ 1.96
CCDC30Q5VVM6 AC138907.5-202ENST00000569484 235 ntBASIC27.29■■□□□ 1.96
CCDC30Q5VVM6 AC053503.5-201ENST00000601508 636 ntBASIC27.29■■□□□ 1.96
CCDC30Q5VVM6 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
CCDC30Q5VVM6 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC27.29■■□□□ 1.96
CCDC30Q5VVM6 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC27.29■■□□□ 1.96
CCDC30Q5VVM6 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC27.29■■□□□ 1.96
CCDC30Q5VVM6 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
CCDC30Q5VVM6 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
CCDC30Q5VVM6 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC27.28■■□□□ 1.96
CCDC30Q5VVM6 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
CCDC30Q5VVM6 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC27.28■■□□□ 1.96
CCDC30Q5VVM6 AC012676.1-201ENST00000574705 1949 ntBASIC27.28■■□□□ 1.96
CCDC30Q5VVM6 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC27.28■■□□□ 1.96
CCDC30Q5VVM6 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC27.28■■□□□ 1.96
CCDC30Q5VVM6 AC003102.1-202ENST00000563394 1796 ntBASIC27.28■■□□□ 1.96
CCDC30Q5VVM6 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC27.28■■□□□ 1.96
CCDC30Q5VVM6 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
CCDC30Q5VVM6 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC27.28■■□□□ 1.96
CCDC30Q5VVM6 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
CCDC30Q5VVM6 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC27.28■■□□□ 1.96
CCDC30Q5VVM6 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC27.28■■□□□ 1.96
CCDC30Q5VVM6 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC27.28■■□□□ 1.96
CCDC30Q5VVM6 AP001160.3-201ENST00000601484 763 ntBASIC27.28■■□□□ 1.96
CCDC30Q5VVM6 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC27.28■■□□□ 1.96
CCDC30Q5VVM6 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC27.28■■□□□ 1.96
CCDC30Q5VVM6 FAM99A-202ENST00000538190 1989 ntBASIC27.28■■□□□ 1.96
CCDC30Q5VVM6 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC27.27■■□□□ 1.96
CCDC30Q5VVM6 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
CCDC30Q5VVM6 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC27.27■■□□□ 1.96
CCDC30Q5VVM6 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC27.27■■□□□ 1.96
CCDC30Q5VVM6 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC27.27■■□□□ 1.96
CCDC30Q5VVM6 AC026471.6-201ENST00000622954 1905 ntBASIC27.27■■□□□ 1.96
CCDC30Q5VVM6 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
CCDC30Q5VVM6 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
CCDC30Q5VVM6 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
CCDC30Q5VVM6 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
CCDC30Q5VVM6 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
CCDC30Q5VVM6 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.96
CCDC30Q5VVM6 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.96
CCDC30Q5VVM6 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC27.26■■□□□ 1.96
CCDC30Q5VVM6 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC27.26■■□□□ 1.96
CCDC30Q5VVM6 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
CCDC30Q5VVM6 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
CCDC30Q5VVM6 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC27.26■■□□□ 1.95
CCDC30Q5VVM6 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC27.26■■□□□ 1.95
CCDC30Q5VVM6 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
CCDC30Q5VVM6 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC27.25■■□□□ 1.95
CCDC30Q5VVM6 ECEL1P1-201ENST00000373592 1742 ntBASIC27.25■■□□□ 1.95
CCDC30Q5VVM6 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
CCDC30Q5VVM6 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
CCDC30Q5VVM6 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
CCDC30Q5VVM6 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC27.25■■□□□ 1.95
CCDC30Q5VVM6 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC27.25■■□□□ 1.95
CCDC30Q5VVM6 AC010141.2-201ENST00000452426 721 ntBASIC27.25■■□□□ 1.95
CCDC30Q5VVM6 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC27.25■■□□□ 1.95
CCDC30Q5VVM6 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
CCDC30Q5VVM6 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC27.25■■□□□ 1.95
CCDC30Q5VVM6 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC27.25■■□□□ 1.95
CCDC30Q5VVM6 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC27.25■■□□□ 1.95
CCDC30Q5VVM6 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC27.25■■□□□ 1.95
CCDC30Q5VVM6 WWOX-218ENST00000627394 894 ntTSL 5 BASIC27.25■■□□□ 1.95
CCDC30Q5VVM6 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC27.25■■□□□ 1.95
CCDC30Q5VVM6 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC27.25■■□□□ 1.95
CCDC30Q5VVM6 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
CCDC30Q5VVM6 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
CCDC30Q5VVM6 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC27.25■■□□□ 1.95
CCDC30Q5VVM6 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
CCDC30Q5VVM6 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
CCDC30Q5VVM6 AC133561.1-201ENST00000568600 2415 ntBASIC27.25■■□□□ 1.95
CCDC30Q5VVM6 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC27.24■■□□□ 1.95
CCDC30Q5VVM6 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
CCDC30Q5VVM6 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC27.24■■□□□ 1.95
CCDC30Q5VVM6 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
CCDC30Q5VVM6 DLX3-202ENST00000512495 834 ntTSL 2 BASIC27.24■■□□□ 1.95
CCDC30Q5VVM6 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC27.24■■□□□ 1.95
CCDC30Q5VVM6 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC27.24■■□□□ 1.95
CCDC30Q5VVM6 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
CCDC30Q5VVM6 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
CCDC30Q5VVM6 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC27.24■■□□□ 1.95
CCDC30Q5VVM6 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
CCDC30Q5VVM6 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC27.23■■□□□ 1.95
CCDC30Q5VVM6 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
CCDC30Q5VVM6 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
CCDC30Q5VVM6 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC27.23■■□□□ 1.95
CCDC30Q5VVM6 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
CCDC30Q5VVM6 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC27.23■■□□□ 1.95
CCDC30Q5VVM6 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC27.23■■□□□ 1.95
CCDC30Q5VVM6 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC27.23■■□□□ 1.95
CCDC30Q5VVM6 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC27.23■■□□□ 1.95
CCDC30Q5VVM6 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC27.23■■□□□ 1.95
CCDC30Q5VVM6 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC27.23■■□□□ 1.95
CCDC30Q5VVM6 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
CCDC30Q5VVM6 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
Retrieved 100 of 98,524 protein–RNA pairs in 15.2 ms