Protein–RNA interactions for Protein: P0CX71

TY1A-ER1, Transposon Ty1-ER1 Gag polyprotein, yeastyeast

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1A-ER1P0CX71 YKL083WYKL083W 615 nt4.75□□□□□ -1.65
TY1A-ER1P0CX71 YLR125WYLR125W 411 nt4.75□□□□□ -1.65
TY1A-ER1P0CX71 YAR053WYAR053W 297 nt4.75□□□□□ -1.65
TY1A-ER1P0CX71 RPS1BYML063W 768 nt4.75□□□□□ -1.65
TY1A-ER1P0CX71 YMR087WYMR087W 855 nt4.75□□□□□ -1.65
TY1A-ER1P0CX71 YNL150WYNL150W 408 nt4.75□□□□□ -1.65
TY1A-ER1P0CX71 LSC1YOR142W 990 nt4.75□□□□□ -1.65
TY1A-ER1P0CX71 ULA1YPL003W 1389 nt4.75□□□□□ -1.65
TY1A-ER1P0CX71 YTA6YPL074W 2265 nt4.75□□□□□ -1.65
TY1A-ER1P0CX71 MBP1YDL056W 2502 nt4.74□□□□□ -1.65
TY1A-ER1P0CX71 YPS7YDR349C 1791 nt4.74□□□□□ -1.65
TY1A-ER1P0CX71 SDH4YDR178W 546 nt4.74□□□□□ -1.65
TY1A-ER1P0CX71 YAP3YHL009C 993 nt4.74□□□□□ -1.65
TY1A-ER1P0CX71 YIL014C-AYIL014C-A 315 nt4.74□□□□□ -1.65
TY1A-ER1P0CX71 DPH1YIL103W 1278 nt4.74□□□□□ -1.65
TY1A-ER1P0CX71 DJP1YIR004W 1299 nt4.74□□□□□ -1.65
TY1A-ER1P0CX71 ENT3YJR125C 1227 nt4.74□□□□□ -1.65
TY1A-ER1P0CX71 YML018CYML018C 1182 nt4.74□□□□□ -1.65
TY1A-ER1P0CX71 SCW10YMR305C 1170 nt4.74□□□□□ -1.65
TY1A-ER1P0CX71 YBR285WYBR285W 435 nt4.74□□□□□ -1.65
TY1A-ER1P0CX71 STV1YMR054W 2673 nt4.74□□□□□ -1.65
TY1A-ER1P0CX71 MON1YGL124C 1935 nt4.74□□□□□ -1.65
TY1A-ER1P0CX71 VHR1YIL056W 1923 nt4.74□□□□□ -1.65
TY1A-ER1P0CX71 CTR86YCR054C 1692 nt4.73□□□□□ -1.65
TY1A-ER1P0CX71 RIM4YHL024W 2142 nt4.73□□□□□ -1.65
TY1A-ER1P0CX71 PAH1YMR165C 2589 nt4.73□□□□□ -1.65
TY1A-ER1P0CX71 YMR018WYMR018W 1545 nt4.73□□□□□ -1.65
TY1A-ER1P0CX71 SKM1YOL113W 1968 nt4.73□□□□□ -1.65
TY1A-ER1P0CX71 YCR022CYCR022C 345 nt4.73□□□□□ -1.65
TY1A-ER1P0CX71 GCS1YDL226C 1059 nt4.73□□□□□ -1.65
TY1A-ER1P0CX71 SWF1YDR126W 1011 nt4.73□□□□□ -1.65
TY1A-ER1P0CX71 PET54YGR222W 882 nt4.73□□□□□ -1.65
TY1A-ER1P0CX71 BNA1YJR025C 534 nt4.73□□□□□ -1.65
TY1A-ER1P0CX71 YML031C-AYML031C-A 336 nt4.73□□□□□ -1.65
TY1A-ER1P0CX71 TIF11YMR260C 462 nt4.73□□□□□ -1.65
TY1A-ER1P0CX71 NRM1YNR009W 750 nt4.73□□□□□ -1.65
TY1A-ER1P0CX71 MRPS16YPL013C 366 nt4.73□□□□□ -1.65
TY1A-ER1P0CX71 YPL062WYPL062W 405 nt4.73□□□□□ -1.65
TY1A-ER1P0CX71 YBR076C-AYBR076C-A 267 nt4.73□□□□□ -1.65
TY1A-ER1P0CX71 FYV5YCL058C 459 nt4.73□□□□□ -1.65
TY1A-ER1P0CX71 CDC40YDR364C 1368 nt4.73□□□□□ -1.65
TY1A-ER1P0CX71 IKS1YJL057C 2004 nt4.73□□□□□ -1.65
TY1A-ER1P0CX71 MUD2YKL074C 1584 nt4.73□□□□□ -1.65
TY1A-ER1P0CX71 YPR148CYPR148C 1308 nt4.72□□□□□ -1.65
TY1A-ER1P0CX71 HRK1YOR267C 2280 nt4.72□□□□□ -1.65
TY1A-ER1P0CX71 PUS1YPL212C 1635 nt4.72□□□□□ -1.65
TY1A-ER1P0CX71 APE3YBR286W 1614 nt4.72□□□□□ -1.65
TY1A-ER1P0CX71 NTH2YBR001C 2343 nt4.72□□□□□ -1.65
TY1A-ER1P0CX71 YER034WYER034W 558 nt4.72□□□□□ -1.65
TY1A-ER1P0CX71 YER135CYER135C 393 nt4.72□□□□□ -1.65
TY1A-ER1P0CX71 SAE2YGL175C 1038 nt4.72□□□□□ -1.65
TY1A-ER1P0CX71 CSE4YKL049C 690 nt4.72□□□□□ -1.65
TY1A-ER1P0CX71 YKL136WYKL136W 399 nt4.72□□□□□ -1.65
TY1A-ER1P0CX71 CTK3YML112W 891 nt4.72□□□□□ -1.65
TY1A-ER1P0CX71 PGA3YML125C 939 nt4.72□□□□□ -1.65
TY1A-ER1P0CX71 PIN3YPR154W 648 nt4.72□□□□□ -1.65
TY1A-ER1P0CX71 SMP3YOR149C 1551 nt4.72□□□□□ -1.65
TY1A-ER1P0CX71 FRE1YLR214W 2061 nt4.72□□□□□ -1.65
TY1A-ER1P0CX71 MSE1YOL033W 1611 nt4.72□□□□□ -1.65
TY1A-ER1P0CX71 HES1YOR237W 1305 nt4.72□□□□□ -1.65
TY1A-ER1P0CX71 BCH2YKR027W 2298 nt4.71□□□□□ -1.65
TY1A-ER1P0CX71 FAR8YMR029C 1572 nt4.71□□□□□ -1.66
TY1A-ER1P0CX71 GYP6YJL044C 1377 nt4.71□□□□□ -1.66
TY1A-ER1P0CX71 YDL240C-AYDL240C-A 138 nt4.71□□□□□ -1.66
TY1A-ER1P0CX71 AIM7YDR063W 450 nt4.71□□□□□ -1.66
TY1A-ER1P0CX71 GPI19YDR437W 423 nt4.71□□□□□ -1.66
TY1A-ER1P0CX71 SDC1YDR469W 528 nt4.71□□□□□ -1.66
TY1A-ER1P0CX71 LPP1YDR503C 825 nt4.71□□□□□ -1.66
TY1A-ER1P0CX71 LSB1YGR136W 726 nt4.71□□□□□ -1.66
TY1A-ER1P0CX71 GOS1YHL031C 672 nt4.71□□□□□ -1.66
TY1A-ER1P0CX71 SUP19tS(UGA)E 82 nt4.71□□□□□ -1.66
TY1A-ER1P0CX71 SUP17tS(UGA)I 82 nt4.71□□□□□ -1.66
TY1A-ER1P0CX71 SUP16tS(UGA)P 82 nt4.71□□□□□ -1.66
TY1A-ER1P0CX71 YJR038CYJR038C 363 nt4.71□□□□□ -1.66
TY1A-ER1P0CX71 HIT1YJR055W 495 nt4.71□□□□□ -1.66
TY1A-ER1P0CX71 CMC2YBL059C-A 330 nt4.71□□□□□ -1.66
TY1A-ER1P0CX71 YOR392WYOR392W 444 nt4.71□□□□□ -1.66
TY1A-ER1P0CX71 YPL038W-AYPL038W-A 192 nt4.71□□□□□ -1.66
TY1A-ER1P0CX71 UBA2YDR390C 1911 nt4.71□□□□□ -1.66
TY1A-ER1P0CX71 TFB2YPL122C 1542 nt4.71□□□□□ -1.66
TY1A-ER1P0CX71 THP1YOL072W 1368 nt4.7□□□□□ -1.66
TY1A-ER1P0CX71 DPB4YDR121W 591 nt4.7□□□□□ -1.66
TY1A-ER1P0CX71 SLO1YER180C-A 258 nt4.7□□□□□ -1.66
TY1A-ER1P0CX71 CFD1YIL003W 882 nt4.7□□□□□ -1.66
TY1A-ER1P0CX71 MCR1YKL150W 909 nt4.7□□□□□ -1.66
TY1A-ER1P0CX71 ADE4YMR300C 1533 nt4.7□□□□□ -1.66
TY1A-ER1P0CX71 IMA1YGR287C 1770 nt4.7□□□□□ -1.66
TY1A-ER1P0CX71 SEC2YNL272C 2280 nt4.7□□□□□ -1.66
TY1A-ER1P0CX71 GAL80YML051W 1308 nt4.7□□□□□ -1.66
TY1A-ER1P0CX71 ADE12YNL220W 1302 nt4.7□□□□□ -1.66
TY1A-ER1P0CX71 SUP35YDR172W 2058 nt4.69□□□□□ -1.66
TY1A-ER1P0CX71 ACK1YDL203C 1872 nt4.69□□□□□ -1.66
TY1A-ER1P0CX71 EXO5YBR163W 1758 nt4.69□□□□□ -1.66
TY1A-ER1P0CX71 MCH4YOL119C 1506 nt4.69□□□□□ -1.66
TY1A-ER1P0CX71 ARG82YDR173C 1068 nt4.69□□□□□ -1.66
TY1A-ER1P0CX71 MRM2YGL136C 963 nt4.69□□□□□ -1.66
TY1A-ER1P0CX71 YAE1YJR067C 426 nt4.69□□□□□ -1.66
TY1A-ER1P0CX71 AIM29YKR074W 468 nt4.69□□□□□ -1.66
TY1A-ER1P0CX71 AAT2YLR027C 1257 nt4.69□□□□□ -1.66
TY1A-ER1P0CX71 AFB1YLR040C 675 nt4.69□□□□□ -1.66
Retrieved 100 of 7,029 protein–RNA pairs in 38.9 ms