Protein–RNA interactions for Protein: O43736

ITM2A, Integral membrane protein 2A, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITM2AO43736 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC20.92■□□□□ 0.94
ITM2AO43736 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ITM2AO43736 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
ITM2AO43736 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
ITM2AO43736 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ITM2AO43736 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
ITM2AO43736 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ITM2AO43736 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ITM2AO43736 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
ITM2AO43736 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
ITM2AO43736 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
ITM2AO43736 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
ITM2AO43736 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
ITM2AO43736 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
ITM2AO43736 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC20.91■□□□□ 0.94
ITM2AO43736 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
ITM2AO43736 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
ITM2AO43736 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC20.91■□□□□ 0.94
ITM2AO43736 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
ITM2AO43736 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC20.9■□□□□ 0.94
ITM2AO43736 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC20.9■□□□□ 0.94
ITM2AO43736 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ITM2AO43736 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC20.9■□□□□ 0.94
ITM2AO43736 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
ITM2AO43736 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC20.9■□□□□ 0.94
ITM2AO43736 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC20.9■□□□□ 0.94
ITM2AO43736 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
ITM2AO43736 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ITM2AO43736 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ITM2AO43736 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
ITM2AO43736 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
ITM2AO43736 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
ITM2AO43736 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
ITM2AO43736 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC20.89■□□□□ 0.94
ITM2AO43736 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC20.89■□□□□ 0.94
ITM2AO43736 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC20.89■□□□□ 0.94
ITM2AO43736 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC20.89■□□□□ 0.94
ITM2AO43736 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC20.89■□□□□ 0.94
ITM2AO43736 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC20.89■□□□□ 0.93
ITM2AO43736 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
ITM2AO43736 FEM1AP1-201ENST00000431297 1995 ntBASIC20.89■□□□□ 0.93
ITM2AO43736 AL049796.1-201ENST00000565336 1766 ntBASIC20.89■□□□□ 0.93
ITM2AO43736 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
ITM2AO43736 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
ITM2AO43736 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
ITM2AO43736 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
ITM2AO43736 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
ITM2AO43736 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC20.88■□□□□ 0.93
ITM2AO43736 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC20.88■□□□□ 0.93
ITM2AO43736 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC20.88■□□□□ 0.93
ITM2AO43736 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
ITM2AO43736 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
ITM2AO43736 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
ITM2AO43736 MIR6724-1-201ENST00000616420 92 ntBASIC20.88■□□□□ 0.93
ITM2AO43736 MIR6724-2-201ENST00000616483 92 ntBASIC20.88■□□□□ 0.93
ITM2AO43736 MIR6724-4-201ENST00000617390 92 ntBASIC20.88■□□□□ 0.93
ITM2AO43736 MIR6724-3-201ENST00000622482 92 ntBASIC20.88■□□□□ 0.93
ITM2AO43736 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
ITM2AO43736 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
ITM2AO43736 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
ITM2AO43736 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
ITM2AO43736 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
ITM2AO43736 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
ITM2AO43736 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC20.88■□□□□ 0.93
ITM2AO43736 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ITM2AO43736 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
ITM2AO43736 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
ITM2AO43736 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC20.87■□□□□ 0.93
ITM2AO43736 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
ITM2AO43736 RBM38-205ENST00000440234 686 ntTSL 2 BASIC20.87■□□□□ 0.93
ITM2AO43736 UNC93B8-201ENST00000511903 705 ntBASIC20.87■□□□□ 0.93
ITM2AO43736 AC099791.2-201ENST00000605725 427 ntBASIC20.87■□□□□ 0.93
ITM2AO43736 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC20.87■□□□□ 0.93
ITM2AO43736 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
ITM2AO43736 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ITM2AO43736 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC20.87■□□□□ 0.93
ITM2AO43736 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
ITM2AO43736 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
ITM2AO43736 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
ITM2AO43736 AC092667.1-201ENST00000434301 2586 ntBASIC20.87■□□□□ 0.93
ITM2AO43736 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ITM2AO43736 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
ITM2AO43736 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
ITM2AO43736 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
ITM2AO43736 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
ITM2AO43736 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
ITM2AO43736 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
ITM2AO43736 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
ITM2AO43736 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
ITM2AO43736 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC20.86■□□□□ 0.93
ITM2AO43736 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC20.86■□□□□ 0.93
ITM2AO43736 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC20.86■□□□□ 0.93
ITM2AO43736 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
ITM2AO43736 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
ITM2AO43736 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
ITM2AO43736 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
ITM2AO43736 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
ITM2AO43736 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC20.86■□□□□ 0.93
ITM2AO43736 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
ITM2AO43736 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms