Protein–RNA interactions for Protein: A0A0A0MS06

TRBV23-1, T-cell receptor beta variable 23-1 (non-functional) (Fragment), humanhuman

Predictions only

Length 115 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV23-1A0A0A0MS06 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC17.93■□□□□ 0.46
TRBV23-1A0A0A0MS06 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC17.93■□□□□ 0.46
TRBV23-1A0A0A0MS06 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC17.93■□□□□ 0.46
TRBV23-1A0A0A0MS06 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC17.93■□□□□ 0.46
TRBV23-1A0A0A0MS06 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRBV23-1A0A0A0MS06 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
TRBV23-1A0A0A0MS06 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRBV23-1A0A0A0MS06 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRBV23-1A0A0A0MS06 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRBV23-1A0A0A0MS06 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRBV23-1A0A0A0MS06 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC17.93■□□□□ 0.46
TRBV23-1A0A0A0MS06 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
TRBV23-1A0A0A0MS06 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
TRBV23-1A0A0A0MS06 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
TRBV23-1A0A0A0MS06 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC17.93■□□□□ 0.46
TRBV23-1A0A0A0MS06 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRBV23-1A0A0A0MS06 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC17.92■□□□□ 0.46
TRBV23-1A0A0A0MS06 AC137767.1-201ENST00000602918 1920 ntBASIC17.92■□□□□ 0.46
TRBV23-1A0A0A0MS06 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRBV23-1A0A0A0MS06 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TRBV23-1A0A0A0MS06 RHOF-204ENST00000537265 699 ntTSL 2 BASIC17.92■□□□□ 0.46
TRBV23-1A0A0A0MS06 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC17.92■□□□□ 0.46
TRBV23-1A0A0A0MS06 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRBV23-1A0A0A0MS06 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
TRBV23-1A0A0A0MS06 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TRBV23-1A0A0A0MS06 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC17.92■□□□□ 0.46
TRBV23-1A0A0A0MS06 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRBV23-1A0A0A0MS06 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TRBV23-1A0A0A0MS06 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRBV23-1A0A0A0MS06 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
TRBV23-1A0A0A0MS06 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRBV23-1A0A0A0MS06 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
TRBV23-1A0A0A0MS06 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRBV23-1A0A0A0MS06 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
TRBV23-1A0A0A0MS06 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
TRBV23-1A0A0A0MS06 OR7E47P-201ENST00000546390 1422 ntBASIC17.91■□□□□ 0.46
TRBV23-1A0A0A0MS06 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRBV23-1A0A0A0MS06 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TRBV23-1A0A0A0MS06 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
TRBV23-1A0A0A0MS06 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRBV23-1A0A0A0MS06 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRBV23-1A0A0A0MS06 MFF-208ENST00000409616 1247 ntTSL 5 BASIC17.91■□□□□ 0.46
TRBV23-1A0A0A0MS06 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC17.91■□□□□ 0.46
TRBV23-1A0A0A0MS06 STOX2-205ENST00000513034 807 ntTSL 3 BASIC17.91■□□□□ 0.46
TRBV23-1A0A0A0MS06 AL354811.1-201ENST00000610286 706 ntBASIC17.91■□□□□ 0.46
TRBV23-1A0A0A0MS06 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC17.91■□□□□ 0.46
TRBV23-1A0A0A0MS06 AL358852.1-201ENST00000623174 1268 ntBASIC17.91■□□□□ 0.46
TRBV23-1A0A0A0MS06 AC105233.4-201ENST00000642045 216 ntBASIC17.91■□□□□ 0.46
TRBV23-1A0A0A0MS06 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
TRBV23-1A0A0A0MS06 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRBV23-1A0A0A0MS06 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TRBV23-1A0A0A0MS06 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRBV23-1A0A0A0MS06 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRBV23-1A0A0A0MS06 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRBV23-1A0A0A0MS06 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRBV23-1A0A0A0MS06 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC17.9■□□□□ 0.46
TRBV23-1A0A0A0MS06 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TRBV23-1A0A0A0MS06 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC17.9■□□□□ 0.46
TRBV23-1A0A0A0MS06 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC17.9■□□□□ 0.46
TRBV23-1A0A0A0MS06 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC17.9■□□□□ 0.46
TRBV23-1A0A0A0MS06 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRBV23-1A0A0A0MS06 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRBV23-1A0A0A0MS06 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRBV23-1A0A0A0MS06 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRBV23-1A0A0A0MS06 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC17.9■□□□□ 0.46
TRBV23-1A0A0A0MS06 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRBV23-1A0A0A0MS06 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRBV23-1A0A0A0MS06 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC17.89■□□□□ 0.46
TRBV23-1A0A0A0MS06 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC17.89■□□□□ 0.46
TRBV23-1A0A0A0MS06 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC17.89■□□□□ 0.46
TRBV23-1A0A0A0MS06 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.46
TRBV23-1A0A0A0MS06 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
TRBV23-1A0A0A0MS06 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRBV23-1A0A0A0MS06 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRBV23-1A0A0A0MS06 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
TRBV23-1A0A0A0MS06 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
TRBV23-1A0A0A0MS06 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC17.89■□□□□ 0.45
TRBV23-1A0A0A0MS06 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
TRBV23-1A0A0A0MS06 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC17.89■□□□□ 0.45
TRBV23-1A0A0A0MS06 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRBV23-1A0A0A0MS06 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC17.89■□□□□ 0.45
TRBV23-1A0A0A0MS06 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRBV23-1A0A0A0MS06 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
TRBV23-1A0A0A0MS06 AL034346.1-201ENST00000568244 1277 ntBASIC17.89■□□□□ 0.45
TRBV23-1A0A0A0MS06 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
TRBV23-1A0A0A0MS06 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRBV23-1A0A0A0MS06 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
TRBV23-1A0A0A0MS06 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRBV23-1A0A0A0MS06 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRBV23-1A0A0A0MS06 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRBV23-1A0A0A0MS06 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
TRBV23-1A0A0A0MS06 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
TRBV23-1A0A0A0MS06 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRBV23-1A0A0A0MS06 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC17.89■□□□□ 0.45
TRBV23-1A0A0A0MS06 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC17.89■□□□□ 0.45
TRBV23-1A0A0A0MS06 GALC-202ENST00000393568 2054 ntTSL 2 BASIC17.89■□□□□ 0.45
TRBV23-1A0A0A0MS06 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRBV23-1A0A0A0MS06 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRBV23-1A0A0A0MS06 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TRBV23-1A0A0A0MS06 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 141 ms