Protein–RNA interactions for Protein: Q3KNW1

SNAI3, Zinc finger protein SNAI3, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI3Q3KNW1 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SNAI3Q3KNW1 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC18.57■□□□□ 0.56
SNAI3Q3KNW1 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC18.57■□□□□ 0.56
SNAI3Q3KNW1 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SNAI3Q3KNW1 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SNAI3Q3KNW1 AF213884.3-201ENST00000563833 479 ntBASIC18.57■□□□□ 0.56
SNAI3Q3KNW1 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC18.57■□□□□ 0.56
SNAI3Q3KNW1 SMUG1P1-201ENST00000590640 811 ntBASIC18.57■□□□□ 0.56
SNAI3Q3KNW1 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC18.57■□□□□ 0.56
SNAI3Q3KNW1 AL031432.3-201ENST00000607698 485 ntBASIC18.57■□□□□ 0.56
SNAI3Q3KNW1 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SNAI3Q3KNW1 MPST-208ENST00000628507 698 ntTSL 5 BASIC18.57■□□□□ 0.56
SNAI3Q3KNW1 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SNAI3Q3KNW1 AC026310.3-201ENST00000625186 2373 ntBASIC18.57■□□□□ 0.56
SNAI3Q3KNW1 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
SNAI3Q3KNW1 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SNAI3Q3KNW1 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC18.57■□□□□ 0.56
SNAI3Q3KNW1 AL137060.1-201ENST00000618151 2648 ntBASIC18.56■□□□□ 0.56
SNAI3Q3KNW1 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
SNAI3Q3KNW1 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC18.56■□□□□ 0.56
SNAI3Q3KNW1 TSPY26P-201ENST00000476365 1326 ntBASIC18.56■□□□□ 0.56
SNAI3Q3KNW1 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
SNAI3Q3KNW1 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
SNAI3Q3KNW1 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC18.56■□□□□ 0.56
SNAI3Q3KNW1 MIR939-201ENST00000401314 82 ntBASIC18.56■□□□□ 0.56
SNAI3Q3KNW1 AICDA-202ENST00000537228 667 ntTSL 5 BASIC18.56■□□□□ 0.56
SNAI3Q3KNW1 AL034346.1-201ENST00000568244 1277 ntBASIC18.56■□□□□ 0.56
SNAI3Q3KNW1 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
SNAI3Q3KNW1 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SNAI3Q3KNW1 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
SNAI3Q3KNW1 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SNAI3Q3KNW1 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC18.56■□□□□ 0.56
SNAI3Q3KNW1 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SNAI3Q3KNW1 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SNAI3Q3KNW1 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SNAI3Q3KNW1 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
SNAI3Q3KNW1 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SNAI3Q3KNW1 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SNAI3Q3KNW1 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC18.55■□□□□ 0.56
SNAI3Q3KNW1 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SNAI3Q3KNW1 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC18.55■□□□□ 0.56
SNAI3Q3KNW1 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
SNAI3Q3KNW1 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SNAI3Q3KNW1 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SNAI3Q3KNW1 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SNAI3Q3KNW1 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SNAI3Q3KNW1 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC18.55■□□□□ 0.56
SNAI3Q3KNW1 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
SNAI3Q3KNW1 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC18.54■□□□□ 0.56
SNAI3Q3KNW1 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SNAI3Q3KNW1 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SNAI3Q3KNW1 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
SNAI3Q3KNW1 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
SNAI3Q3KNW1 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC18.54■□□□□ 0.56
SNAI3Q3KNW1 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SNAI3Q3KNW1 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC18.54■□□□□ 0.56
SNAI3Q3KNW1 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC18.54■□□□□ 0.56
SNAI3Q3KNW1 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SNAI3Q3KNW1 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC18.54■□□□□ 0.56
SNAI3Q3KNW1 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC18.54■□□□□ 0.56
SNAI3Q3KNW1 AL139246.5-201ENST00000606645 996 ntBASIC18.54■□□□□ 0.56
SNAI3Q3KNW1 EFS-203ENST00000429593 2610 ntTSL 2 BASIC18.54■□□□□ 0.56
SNAI3Q3KNW1 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SNAI3Q3KNW1 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SNAI3Q3KNW1 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
SNAI3Q3KNW1 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SNAI3Q3KNW1 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SNAI3Q3KNW1 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
SNAI3Q3KNW1 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SNAI3Q3KNW1 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
SNAI3Q3KNW1 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SNAI3Q3KNW1 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC18.53■□□□□ 0.56
SNAI3Q3KNW1 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
SNAI3Q3KNW1 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC18.53■□□□□ 0.56
SNAI3Q3KNW1 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
SNAI3Q3KNW1 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC18.53■□□□□ 0.56
SNAI3Q3KNW1 AC091305.1-201ENST00000479476 895 ntBASIC18.53■□□□□ 0.56
SNAI3Q3KNW1 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SNAI3Q3KNW1 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC18.53■□□□□ 0.56
SNAI3Q3KNW1 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
SNAI3Q3KNW1 AL136967.2-201ENST00000623968 743 ntBASIC18.53■□□□□ 0.56
SNAI3Q3KNW1 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SNAI3Q3KNW1 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SNAI3Q3KNW1 RASA4CP-201ENST00000424092 1398 ntBASIC18.53■□□□□ 0.56
SNAI3Q3KNW1 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
SNAI3Q3KNW1 ASL-203ENST00000380839 1765 ntTSL 5 BASIC18.53■□□□□ 0.56
SNAI3Q3KNW1 TUB-203ENST00000534099 1759 ntTSL 2 BASIC18.53■□□□□ 0.56
SNAI3Q3KNW1 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC18.52■□□□□ 0.56
SNAI3Q3KNW1 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC18.52■□□□□ 0.56
SNAI3Q3KNW1 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC18.52■□□□□ 0.56
SNAI3Q3KNW1 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SNAI3Q3KNW1 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
SNAI3Q3KNW1 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
SNAI3Q3KNW1 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
SNAI3Q3KNW1 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SNAI3Q3KNW1 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC18.52■□□□□ 0.56
SNAI3Q3KNW1 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC18.52■□□□□ 0.56
SNAI3Q3KNW1 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC18.52■□□□□ 0.56
SNAI3Q3KNW1 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
SNAI3Q3KNW1 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC18.52■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 1688 ms