Protein–RNA interactions for Protein: Q12392

TY2A-DR1, Transposon Ty2-DR1 Gag polyprotein, yeastyeast

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY2A-DR1Q12392 NBP1YLR457C 960 nt3.85□□□□□ -1.79
TY2A-DR1Q12392 SUB1YMR039C 879 nt3.85□□□□□ -1.79
TY2A-DR1Q12392 ARL3YPL051W 597 nt3.85□□□□□ -1.79
TY2A-DR1Q12392 CWH43YCR017C 2862 nt3.85□□□□□ -1.79
TY2A-DR1Q12392 VPS73YGL104C 1461 nt3.85□□□□□ -1.79
TY2A-DR1Q12392 GCD1YOR260W 1737 nt3.84□□□□□ -1.79
TY2A-DR1Q12392 PRM15YMR278W 1869 nt3.84□□□□□ -1.79
TY2A-DR1Q12392 WHI3YNL197C 1986 nt3.84□□□□□ -1.79
TY2A-DR1Q12392 UBC5YDR059C 447 nt3.84□□□□□ -1.79
TY2A-DR1Q12392 YGR114CYGR114C 390 nt3.84□□□□□ -1.79
TY2A-DR1Q12392 ENP2YGR145W 2124 nt3.84□□□□□ -1.79
TY2A-DR1Q12392 IKI1YHR187W 930 nt3.84□□□□□ -1.79
TY2A-DR1Q12392 YKE4YIL023C 1041 nt3.84□□□□□ -1.79
TY2A-DR1Q12392 RPS30AYLR287C-A 192 nt3.84□□□□□ -1.79
TY2A-DR1Q12392 TPM1YNL079C 600 nt3.84□□□□□ -1.79
TY2A-DR1Q12392 PEX27YOR193W 1131 nt3.84□□□□□ -1.79
TY2A-DR1Q12392 YPL035CYPL035C 348 nt3.84□□□□□ -1.79
TY2A-DR1Q12392 CIN2YPL241C 807 nt3.84□□□□□ -1.79
TY2A-DR1Q12392 YPR136CYPR136C 513 nt3.84□□□□□ -1.79
TY2A-DR1Q12392 SSH1YBR283C 1473 nt3.84□□□□□ -1.8
TY2A-DR1Q12392 RRN7YJL025W 1545 nt3.84□□□□□ -1.8
TY2A-DR1Q12392 CHL1YPL008W 2586 nt3.84□□□□□ -1.8
TY2A-DR1Q12392 YOL153CYOL153C 1746 nt3.84□□□□□ -1.8
TY2A-DR1Q12392 PHO84YML123C 1764 nt3.84□□□□□ -1.8
TY2A-DR1Q12392 YDL199CYDL199C 2064 nt3.83□□□□□ -1.8
TY2A-DR1Q12392 TOG1YER184C 2385 nt3.83□□□□□ -1.8
TY2A-DR1Q12392 SIN4YNL236W 2925 nt3.83□□□□□ -1.8
TY2A-DR1Q12392 LRS4YDR439W 1044 nt3.83□□□□□ -1.8
TY2A-DR1Q12392 TLG1YDR468C 675 nt3.83□□□□□ -1.8
TY2A-DR1Q12392 ENT3YJR125C 1227 nt3.83□□□□□ -1.8
TY2A-DR1Q12392 GPX1YKL026C 504 nt3.83□□□□□ -1.8
TY2A-DR1Q12392 RCN1YKL159C 636 nt3.83□□□□□ -1.8
TY2A-DR1Q12392 NDL1YLR254C 570 nt3.83□□□□□ -1.8
TY2A-DR1Q12392 YCL022CYCL022C 516 nt3.83□□□□□ -1.8
TY2A-DR1Q12392 KIN3YAR018C 1308 nt3.83□□□□□ -1.8
TY2A-DR1Q12392 UPC2YDR213W 2742 nt3.82□□□□□ -1.8
TY2A-DR1Q12392 SEC2YNL272C 2280 nt3.82□□□□□ -1.8
TY2A-DR1Q12392 NUR1YDL089W 1455 nt3.82□□□□□ -1.8
TY2A-DR1Q12392 PKP2YGL059W 1476 nt3.82□□□□□ -1.8
TY2A-DR1Q12392 YLR108CYLR108C 1458 nt3.82□□□□□ -1.8
TY2A-DR1Q12392 PDS1YDR113C 1122 nt3.82□□□□□ -1.8
TY2A-DR1Q12392 RPL18BYNL301C 561 nt3.82□□□□□ -1.8
TY2A-DR1Q12392 RPL18AYOL120C 561 nt3.82□□□□□ -1.8
TY2A-DR1Q12392 IDH2YOR136W 1110 nt3.82□□□□□ -1.8
TY2A-DR1Q12392 SPR2YOR214C 711 nt3.82□□□□□ -1.8
TY2A-DR1Q12392 SRL4YPL033C 846 nt3.82□□□□□ -1.8
TY2A-DR1Q12392 HUL5YGL141W 2733 nt3.82□□□□□ -1.8
TY2A-DR1Q12392 MSM1YGR171C 1728 nt3.81□□□□□ -1.8
TY2A-DR1Q12392 AI4Q0065 1671 nt3.81□□□□□ -1.8
TY2A-DR1Q12392 PRP31YGR091W 1485 nt3.81□□□□□ -1.8
TY2A-DR1Q12392 KRE29YER038C 1395 nt3.81□□□□□ -1.8
TY2A-DR1Q12392 SLY41YOR307C 1362 nt3.81□□□□□ -1.8
TY2A-DR1Q12392 NEM1YHR004C 1341 nt3.81□□□□□ -1.8
TY2A-DR1Q12392 HSP30YCR021C 999 nt3.81□□□□□ -1.8
TY2A-DR1Q12392 YDR042CYDR042C 603 nt3.81□□□□□ -1.8
TY2A-DR1Q12392 STE2YFL026W 1296 nt3.81□□□□□ -1.8
TY2A-DR1Q12392 SCM4YGR049W 564 nt3.81□□□□□ -1.8
TY2A-DR1Q12392 DOG1YHR044C 741 nt3.81□□□□□ -1.8
TY2A-DR1Q12392 SWD2YKL018W 990 nt3.81□□□□□ -1.8
TY2A-DR1Q12392 YPR059CYPR059C 387 nt3.81□□□□□ -1.8
TY2A-DR1Q12392 STE24YJR117W 1362 nt3.8□□□□□ -1.8
TY2A-DR1Q12392 PET100YDR079W 336 nt3.8□□□□□ -1.8
TY2A-DR1Q12392 ATC1YDR184C 885 nt3.8□□□□□ -1.8
TY2A-DR1Q12392 GTR2YGR163W 1026 nt3.8□□□□□ -1.8
TY2A-DR1Q12392 DOG2YHR043C 741 nt3.8□□□□□ -1.8
TY2A-DR1Q12392 YIR014WYIR014W 729 nt3.8□□□□□ -1.8
TY2A-DR1Q12392 CTK2YJL006C 972 nt3.8□□□□□ -1.8
TY2A-DR1Q12392 NIS1YNL078W 1224 nt3.8□□□□□ -1.8
TY2A-DR1Q12392 HUB1YNR032C-A 222 nt3.8□□□□□ -1.8
TY2A-DR1Q12392 MDM12YOL009C 816 nt3.8□□□□□ -1.8
TY2A-DR1Q12392 TPT1YOL102C 693 nt3.8□□□□□ -1.8
TY2A-DR1Q12392 SME1YOR159C 285 nt3.8□□□□□ -1.8
TY2A-DR1Q12392 YPL077CYPL077C 723 nt3.8□□□□□ -1.8
TY2A-DR1Q12392 RFC5YBR087W 1065 nt3.8□□□□□ -1.8
TY2A-DR1Q12392 MNN1YER001W 2289 nt3.8□□□□□ -1.8
TY2A-DR1Q12392 RRN11YML043C 1524 nt3.8□□□□□ -1.8
TY2A-DR1Q12392 PHO5YBR093C 1404 nt3.79□□□□□ -1.8
TY2A-DR1Q12392 VPS38YLR360W 1320 nt3.79□□□□□ -1.8
TY2A-DR1Q12392 HMG1YML075C 3165 nt3.79□□□□□ -1.8
TY2A-DR1Q12392 IRC22YEL001C 678 nt3.79□□□□□ -1.8
TY2A-DR1Q12392 YML116W-AYML116W-A 303 nt3.79□□□□□ -1.8
TY2A-DR1Q12392 YMR087WYMR087W 855 nt3.79□□□□□ -1.8
TY2A-DR1Q12392 YNL050CYNL050C 813 nt3.79□□□□□ -1.8
TY2A-DR1Q12392 PNG1YPL096W 1092 nt3.79□□□□□ -1.8
TY2A-DR1Q12392 YML096WYML096W 1578 nt3.79□□□□□ -1.8
TY2A-DR1Q12392 TAF8YML114C 1533 nt3.79□□□□□ -1.8
TY2A-DR1Q12392 URK1YNR012W 1506 nt3.79□□□□□ -1.8
TY2A-DR1Q12392 VID28YIL017C 2766 nt3.79□□□□□ -1.8
TY2A-DR1Q12392 MIS1YBR084W 2928 nt3.78□□□□□ -1.8
TY2A-DR1Q12392 FAS2YPL231W 5664 nt3.78□□□□□ -1.8
TY2A-DR1Q12392 YBR225WYBR225W 2703 nt3.78□□□□□ -1.8
TY2A-DR1Q12392 TVP15YDR100W 432 nt3.78□□□□□ -1.8
TY2A-DR1Q12392 ECM11YDR446W 909 nt3.78□□□□□ -1.8
TY2A-DR1Q12392 YGL088WYGL088W 366 nt3.78□□□□□ -1.8
TY2A-DR1Q12392 SNX4YJL036W 1272 nt3.78□□□□□ -1.8
TY2A-DR1Q12392 YJL175WYJL175W 513 nt3.78□□□□□ -1.8
TY2A-DR1Q12392 MGE1YOR232W 687 nt3.78□□□□□ -1.8
TY2A-DR1Q12392 DIB1YPR082C 432 nt3.78□□□□□ -1.8
TY2A-DR1Q12392 YBR103C-AYBR103C-A 144 nt3.78□□□□□ -1.8
TY2A-DR1Q12392 PWR1PWR1 941 nt3.78□□□□□ -1.8
Retrieved 100 of 7,029 protein–RNA pairs in 779.2 ms