Protein–RNA interactions for Protein: Q04215

TY1A-MR1, Transposon Ty1-MR1 Gag polyprotein, yeastyeast

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1A-MR1Q04215 RAD14YMR201C 1116 nt5.33□□□□□ -1.56
TY1A-MR1Q04215 PRE5YMR314W 705 nt5.33□□□□□ -1.56
TY1A-MR1Q04215 ALT1YLR089C 1779 nt5.33□□□□□ -1.56
TY1A-MR1Q04215 NOT3YIL038C 2511 nt5.33□□□□□ -1.56
TY1A-MR1Q04215 CDC55YGL190C 1581 nt5.33□□□□□ -1.56
TY1A-MR1Q04215 APM2YHL019C 1818 nt5.32□□□□□ -1.56
TY1A-MR1Q04215 MPH3YJR160C 1809 nt5.32□□□□□ -1.56
TY1A-MR1Q04215 TLC1TLC1 1301 nt5.32□□□□□ -1.56
TY1A-MR1Q04215 YFL032WYFL032W 321 nt5.32□□□□□ -1.56
TY1A-MR1Q04215 CBP4YGR174C 513 nt5.32□□□□□ -1.56
TY1A-MR1Q04215 tR(ACG)DtR(ACG)D 73 nt5.32□□□□□ -1.56
TY1A-MR1Q04215 tR(ACG)EtR(ACG)E 73 nt5.32□□□□□ -1.56
TY1A-MR1Q04215 tR(ACG)KtR(ACG)K 73 nt5.32□□□□□ -1.56
TY1A-MR1Q04215 tR(ACG)LtR(ACG)L 73 nt5.32□□□□□ -1.56
TY1A-MR1Q04215 tR(ACG)OtR(ACG)O 73 nt5.32□□□□□ -1.56
TY1A-MR1Q04215 YIL171W-AYIL171W-A 453 nt5.32□□□□□ -1.56
TY1A-MR1Q04215 YJL220WYJL220W 453 nt5.32□□□□□ -1.56
TY1A-MR1Q04215 YJR038CYJR038C 363 nt5.32□□□□□ -1.56
TY1A-MR1Q04215 YKL153WYKL153W 510 nt5.32□□□□□ -1.56
TY1A-MR1Q04215 RPS1BYML063W 768 nt5.32□□□□□ -1.56
TY1A-MR1Q04215 ARG80YMR042W 534 nt5.32□□□□□ -1.56
TY1A-MR1Q04215 RPS19AYOL121C 435 nt5.32□□□□□ -1.56
TY1A-MR1Q04215 ATP3YBR039W 936 nt5.32□□□□□ -1.56
TY1A-MR1Q04215 INA17YPL099C 549 nt5.32□□□□□ -1.56
TY1A-MR1Q04215 YBR124WYBR124W 360 nt5.32□□□□□ -1.56
TY1A-MR1Q04215 SGF29YCL010C 780 nt5.32□□□□□ -1.56
TY1A-MR1Q04215 DPH2YKL191W 1605 nt5.32□□□□□ -1.56
TY1A-MR1Q04215 SRP1YNL189W 1629 nt5.32□□□□□ -1.56
TY1A-MR1Q04215 TDA3YHR009C 1572 nt5.32□□□□□ -1.56
TY1A-MR1Q04215 YLL067CYLL067C 3618 nt5.32□□□□□ -1.56
TY1A-MR1Q04215 YPK2YMR104C 2034 nt5.31□□□□□ -1.56
TY1A-MR1Q04215 SAC6YDR129C 1929 nt5.31□□□□□ -1.56
TY1A-MR1Q04215 SUB2YDL084W 1341 nt5.31□□□□□ -1.56
TY1A-MR1Q04215 ARF2YDL137W 546 nt5.31□□□□□ -1.56
TY1A-MR1Q04215 YER085CYER085C 522 nt5.31□□□□□ -1.56
TY1A-MR1Q04215 MIC26YGR235C 702 nt5.31□□□□□ -1.56
TY1A-MR1Q04215 YKL044WYKL044W 321 nt5.31□□□□□ -1.56
TY1A-MR1Q04215 MRPS18YNL306W 654 nt5.31□□□□□ -1.56
TY1A-MR1Q04215 YOL131WYOL131W 327 nt5.31□□□□□ -1.56
TY1A-MR1Q04215 CDC33YOL139C 642 nt5.31□□□□□ -1.56
TY1A-MR1Q04215 RPS11BYBR048W 471 nt5.31□□□□□ -1.56
TY1A-MR1Q04215 RTC5YOR118W 1704 nt5.31□□□□□ -1.56
TY1A-MR1Q04215 PMS1YNL082W 2622 nt5.3□□□□□ -1.56
TY1A-MR1Q04215 PLM2YDR501W 1566 nt5.3□□□□□ -1.56
TY1A-MR1Q04215 MSS1YMR023C 1581 nt5.3□□□□□ -1.56
TY1A-MR1Q04215 GUA1YMR217W 1578 nt5.3□□□□□ -1.56
TY1A-MR1Q04215 CRZ1YNL027W 2037 nt5.3□□□□□ -1.56
TY1A-MR1Q04215 UBP6YFR010W 1500 nt5.3□□□□□ -1.56
TY1A-MR1Q04215 YBR139WYBR139W 1527 nt5.3□□□□□ -1.56
TY1A-MR1Q04215 ADY2YCR010C 852 nt5.3□□□□□ -1.56
TY1A-MR1Q04215 GPD1YDL022W 1176 nt5.3□□□□□ -1.56
TY1A-MR1Q04215 HNT1YDL125C 477 nt5.3□□□□□ -1.56
TY1A-MR1Q04215 SPO73YER046W 432 nt5.3□□□□□ -1.56
TY1A-MR1Q04215 TDA2YER071C 381 nt5.3□□□□□ -1.56
TY1A-MR1Q04215 YGL108CYGL108C 423 nt5.3□□□□□ -1.56
TY1A-MR1Q04215 YKL065W-AYKL065W-A 222 nt5.3□□□□□ -1.56
TY1A-MR1Q04215 TPK3YKL166C 1197 nt5.3□□□□□ -1.56
TY1A-MR1Q04215 BET5YML077W 480 nt5.3□□□□□ -1.56
TY1A-MR1Q04215 YBL055CYBL055C 1257 nt5.3□□□□□ -1.56
TY1A-MR1Q04215 POP3YNL282W 588 nt5.3□□□□□ -1.56
TY1A-MR1Q04215 CTP1YBR291C 900 nt5.3□□□□□ -1.56
TY1A-MR1Q04215 RAD3YER171W 2337 nt5.3□□□□□ -1.56
TY1A-MR1Q04215 HAA1YPR008W 2085 nt5.3□□□□□ -1.56
TY1A-MR1Q04215 BUD7YOR299W 2241 nt5.29□□□□□ -1.56
TY1A-MR1Q04215 CTK1YKL139W 1587 nt5.29□□□□□ -1.56
TY1A-MR1Q04215 CBP1YJL209W 1965 nt5.29□□□□□ -1.56
TY1A-MR1Q04215 GCG1YER163C 699 nt5.29□□□□□ -1.56
TY1A-MR1Q04215 YPT32YGL210W 669 nt5.29□□□□□ -1.56
TY1A-MR1Q04215 ZRT1YGL255W 1131 nt5.29□□□□□ -1.56
TY1A-MR1Q04215 YIL156W-AYIL156W-A 402 nt5.29□□□□□ -1.56
TY1A-MR1Q04215 YJL015CYJL015C 285 nt5.29□□□□□ -1.56
TY1A-MR1Q04215 YML031C-AYML031C-A 336 nt5.29□□□□□ -1.56
TY1A-MR1Q04215 ISF1YMR081C 1017 nt5.29□□□□□ -1.56
TY1A-MR1Q04215 ERP4YOR016C 624 nt5.29□□□□□ -1.56
TY1A-MR1Q04215 YOR121CYOR121C 306 nt5.29□□□□□ -1.56
TY1A-MR1Q04215 YOR203WYOR203W 354 nt5.29□□□□□ -1.56
TY1A-MR1Q04215 CAM1YPL048W 1248 nt5.29□□□□□ -1.56
TY1A-MR1Q04215 snR24snR24 89 nt5.29□□□□□ -1.56
TY1A-MR1Q04215 EXO5YBR163W 1758 nt5.29□□□□□ -1.56
TY1A-MR1Q04215 BRE2YLR015W 1518 nt5.28□□□□□ -1.56
TY1A-MR1Q04215 SDH4YDR178W 546 nt5.28□□□□□ -1.56
TY1A-MR1Q04215 BNA6YFR047C 888 nt5.28□□□□□ -1.56
TY1A-MR1Q04215 YGL152CYGL152C 678 nt5.28□□□□□ -1.56
TY1A-MR1Q04215 YGR035W-AYGR035W-A 222 nt5.28□□□□□ -1.56
TY1A-MR1Q04215 YLR031WYLR031W 561 nt5.28□□□□□ -1.56
TY1A-MR1Q04215 SMA2YML066C 1110 nt5.28□□□□□ -1.56
TY1A-MR1Q04215 YPL152W-AYPL152W-A 99 nt5.28□□□□□ -1.56
TY1A-MR1Q04215 SRB6YBR253W 366 nt5.28□□□□□ -1.56
TY1A-MR1Q04215 PYC1YGL062W 3537 nt5.28□□□□□ -1.56
TY1A-MR1Q04215 HAP4YKL109W 1665 nt5.28□□□□□ -1.56
TY1A-MR1Q04215 DSS1YMR287C 2910 nt5.27□□□□□ -1.57
TY1A-MR1Q04215 FAT3YKL187C 2253 nt5.27□□□□□ -1.57
TY1A-MR1Q04215 YBR012W-AYBR012W-A 1323 nt5.27□□□□□ -1.57
TY1A-MR1Q04215 YOR142W-AYOR142W-A 1323 nt5.27□□□□□ -1.57
TY1A-MR1Q04215 YPR158W-AYPR158W-A 1323 nt5.27□□□□□ -1.57
TY1A-MR1Q04215 YCL068CYCL068C 783 nt5.27□□□□□ -1.57
TY1A-MR1Q04215 DBP3YGL078C 1572 nt5.27□□□□□ -1.57
TY1A-MR1Q04215 YHR182C-AYHR182C-A 474 nt5.27□□□□□ -1.57
TY1A-MR1Q04215 MCP2YLR253W 1710 nt5.27□□□□□ -1.57
TY1A-MR1Q04215 IOC4YMR044W 1428 nt5.27□□□□□ -1.57
Retrieved 100 of 7,029 protein–RNA pairs in 26.9 ms