Protein–RNA interactions for Protein: P13500

CCL2, C-C motif chemokine 2, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL2P13500 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CCL2P13500 SP2-202ENST00000613139 908 ntTSL 5 BASIC18.65■□□□□ 0.58
CCL2P13500 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC18.65■□□□□ 0.58
CCL2P13500 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
CCL2P13500 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCL2P13500 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCL2P13500 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CCL2P13500 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
CCL2P13500 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.58
CCL2P13500 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.58
CCL2P13500 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
CCL2P13500 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.58
CCL2P13500 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CCL2P13500 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCL2P13500 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCL2P13500 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
CCL2P13500 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCL2P13500 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CCL2P13500 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CCL2P13500 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC18.64■□□□□ 0.57
CCL2P13500 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CCL2P13500 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCL2P13500 AC079834.2-201ENST00000609776 1949 ntBASIC18.64■□□□□ 0.57
CCL2P13500 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
CCL2P13500 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCL2P13500 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC18.64■□□□□ 0.57
CCL2P13500 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
CCL2P13500 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CCL2P13500 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
CCL2P13500 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC18.64■□□□□ 0.57
CCL2P13500 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCL2P13500 ME2-206ENST00000638410 2289 ntTSL 5 BASIC18.63■□□□□ 0.57
CCL2P13500 ME2-210ENST00000639255 2262 ntTSL 5 BASIC18.63■□□□□ 0.57
CCL2P13500 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCL2P13500 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCL2P13500 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC18.63■□□□□ 0.57
CCL2P13500 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CCL2P13500 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC18.63■□□□□ 0.57
CCL2P13500 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCL2P13500 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCL2P13500 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
CCL2P13500 LINC00565-201ENST00000562710 2331 ntBASIC18.63■□□□□ 0.57
CCL2P13500 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCL2P13500 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCL2P13500 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CCL2P13500 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CCL2P13500 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCL2P13500 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CCL2P13500 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CCL2P13500 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCL2P13500 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CCL2P13500 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC18.62■□□□□ 0.57
CCL2P13500 AK1-201ENST00000223836 736 ntTSL 3 BASIC18.62■□□□□ 0.57
CCL2P13500 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
CCL2P13500 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
CCL2P13500 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC18.62■□□□□ 0.57
CCL2P13500 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC18.62■□□□□ 0.57
CCL2P13500 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC18.62■□□□□ 0.57
CCL2P13500 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCL2P13500 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CCL2P13500 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC18.62■□□□□ 0.57
CCL2P13500 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCL2P13500 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCL2P13500 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCL2P13500 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CCL2P13500 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCL2P13500 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCL2P13500 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
CCL2P13500 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CCL2P13500 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCL2P13500 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCL2P13500 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC18.61■□□□□ 0.57
CCL2P13500 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCL2P13500 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCL2P13500 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCL2P13500 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
CCL2P13500 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCL2P13500 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CCL2P13500 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
CCL2P13500 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC18.61■□□□□ 0.57
CCL2P13500 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CCL2P13500 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC18.61■□□□□ 0.57
CCL2P13500 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC18.6■□□□□ 0.57
CCL2P13500 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC18.6■□□□□ 0.57
CCL2P13500 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC18.6■□□□□ 0.57
CCL2P13500 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC18.6■□□□□ 0.57
CCL2P13500 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC18.6■□□□□ 0.57
CCL2P13500 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
CCL2P13500 FBXW4P1-201ENST00000426721 2239 ntBASIC18.6■□□□□ 0.57
CCL2P13500 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCL2P13500 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCL2P13500 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCL2P13500 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CCL2P13500 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC18.6■□□□□ 0.57
CCL2P13500 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
CCL2P13500 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CCL2P13500 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CCL2P13500 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CCL2P13500 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC18.6■□□□□ 0.57
CCL2P13500 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 15.5 ms