Protein–RNA interactions for Protein: O43812

DUX1, Double homeobox protein 1, humanhuman

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DUX1O43812 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
DUX1O43812 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC20.57■□□□□ 0.88
DUX1O43812 BRI3-207ENST00000539286 699 ntTSL 2 BASIC20.57■□□□□ 0.88
DUX1O43812 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC20.57■□□□□ 0.88
DUX1O43812 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
DUX1O43812 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
DUX1O43812 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC20.57■□□□□ 0.88
DUX1O43812 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
DUX1O43812 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC20.57■□□□□ 0.88
DUX1O43812 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC20.57■□□□□ 0.88
DUX1O43812 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
DUX1O43812 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
DUX1O43812 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
DUX1O43812 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
DUX1O43812 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
DUX1O43812 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
DUX1O43812 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
DUX1O43812 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC20.56■□□□□ 0.88
DUX1O43812 EEF1DP3-203ENST00000566025 782 ntBASIC20.56■□□□□ 0.88
DUX1O43812 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC20.56■□□□□ 0.88
DUX1O43812 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC20.56■□□□□ 0.88
DUX1O43812 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
DUX1O43812 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
DUX1O43812 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
DUX1O43812 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC20.56■□□□□ 0.88
DUX1O43812 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
DUX1O43812 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
DUX1O43812 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
DUX1O43812 AC139530.1-201ENST00000575312 1977 ntBASIC20.55■□□□□ 0.88
DUX1O43812 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
DUX1O43812 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC20.55■□□□□ 0.88
DUX1O43812 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC20.55■□□□□ 0.88
DUX1O43812 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
DUX1O43812 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
DUX1O43812 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
DUX1O43812 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
DUX1O43812 AC007322.1-201ENST00000426983 750 ntBASIC20.55■□□□□ 0.88
DUX1O43812 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC20.55■□□□□ 0.88
DUX1O43812 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC20.55■□□□□ 0.88
DUX1O43812 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
DUX1O43812 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC20.55■□□□□ 0.88
DUX1O43812 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
DUX1O43812 AC053503.5-201ENST00000601508 636 ntBASIC20.55■□□□□ 0.88
DUX1O43812 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC20.55■□□□□ 0.88
DUX1O43812 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
DUX1O43812 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
DUX1O43812 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
DUX1O43812 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
DUX1O43812 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC20.55■□□□□ 0.88
DUX1O43812 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC20.55■□□□□ 0.88
DUX1O43812 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
DUX1O43812 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC20.54■□□□□ 0.88
DUX1O43812 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
DUX1O43812 NCF1B-203ENST00000435988 1254 ntBASIC20.54■□□□□ 0.88
DUX1O43812 MAP2K4P1-201ENST00000438453 1195 ntBASIC20.54■□□□□ 0.88
DUX1O43812 DUX4L16-201ENST00000555130 1264 ntBASIC20.54■□□□□ 0.88
DUX1O43812 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC20.54■□□□□ 0.88
DUX1O43812 AC104771.1-201ENST00000603335 964 ntBASIC20.54■□□□□ 0.88
DUX1O43812 AL109923.1-201ENST00000618799 583 ntBASIC20.54■□□□□ 0.88
DUX1O43812 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
DUX1O43812 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
DUX1O43812 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
DUX1O43812 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
DUX1O43812 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
DUX1O43812 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC20.53■□□□□ 0.88
DUX1O43812 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC20.53■□□□□ 0.88
DUX1O43812 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
DUX1O43812 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
DUX1O43812 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
DUX1O43812 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
DUX1O43812 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC20.53■□□□□ 0.88
DUX1O43812 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC20.53■□□□□ 0.88
DUX1O43812 MAZ-216ENST00000616501 991 ntTSL 5 BASIC20.53■□□□□ 0.88
DUX1O43812 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
DUX1O43812 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
DUX1O43812 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
DUX1O43812 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
DUX1O43812 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
DUX1O43812 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
DUX1O43812 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC20.53■□□□□ 0.88
DUX1O43812 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
DUX1O43812 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
DUX1O43812 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC20.52■□□□□ 0.88
DUX1O43812 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
DUX1O43812 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
DUX1O43812 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
DUX1O43812 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
DUX1O43812 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC20.52■□□□□ 0.88
DUX1O43812 GPX1P1-201ENST00000388829 606 ntBASIC20.52■□□□□ 0.88
DUX1O43812 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC20.52■□□□□ 0.88
DUX1O43812 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC20.52■□□□□ 0.88
DUX1O43812 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
DUX1O43812 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC20.52■□□□□ 0.88
DUX1O43812 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC20.52■□□□□ 0.88
DUX1O43812 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.87
DUX1O43812 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
DUX1O43812 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
DUX1O43812 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC20.51■□□□□ 0.87
DUX1O43812 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
DUX1O43812 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 16.5 ms