Protein–RNA interactions for Protein: Q9HA90

EFCC1, EF-hand and coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFCC1Q9HA90 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC25.05■■□□□ 1.6
EFCC1Q9HA90 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC25.05■■□□□ 1.6
EFCC1Q9HA90 MYCNOS-205ENST00000641950 531 ntBASIC25.05■■□□□ 1.6
EFCC1Q9HA90 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
EFCC1Q9HA90 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC25.05■■□□□ 1.6
EFCC1Q9HA90 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC25.05■■□□□ 1.6
EFCC1Q9HA90 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
EFCC1Q9HA90 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC25.04■■□□□ 1.6
EFCC1Q9HA90 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC25.04■■□□□ 1.6
EFCC1Q9HA90 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC25.04■■□□□ 1.6
EFCC1Q9HA90 MIR4758-201ENST00000577688 71 ntBASIC25.04■■□□□ 1.6
EFCC1Q9HA90 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC25.04■■□□□ 1.6
EFCC1Q9HA90 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
EFCC1Q9HA90 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
EFCC1Q9HA90 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
EFCC1Q9HA90 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC25.03■■□□□ 1.6
EFCC1Q9HA90 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
EFCC1Q9HA90 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC25.03■■□□□ 1.6
EFCC1Q9HA90 RHEB-204ENST00000472642 900 ntTSL 3 BASIC25.03■■□□□ 1.6
EFCC1Q9HA90 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC25.03■■□□□ 1.6
EFCC1Q9HA90 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
EFCC1Q9HA90 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC25.03■■□□□ 1.6
EFCC1Q9HA90 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC25.03■■□□□ 1.6
EFCC1Q9HA90 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC25.02■■□□□ 1.6
EFCC1Q9HA90 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
EFCC1Q9HA90 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC25.02■■□□□ 1.6
EFCC1Q9HA90 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
EFCC1Q9HA90 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC25.02■■□□□ 1.6
EFCC1Q9HA90 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC25.02■■□□□ 1.6
EFCC1Q9HA90 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC25.02■■□□□ 1.6
EFCC1Q9HA90 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC25.02■■□□□ 1.6
EFCC1Q9HA90 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC25.02■■□□□ 1.6
EFCC1Q9HA90 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC25.02■■□□□ 1.6
EFCC1Q9HA90 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC25.02■■□□□ 1.6
EFCC1Q9HA90 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
EFCC1Q9HA90 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
EFCC1Q9HA90 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC25.02■■□□□ 1.6
EFCC1Q9HA90 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC25.01■■□□□ 1.59
EFCC1Q9HA90 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC25.01■■□□□ 1.59
EFCC1Q9HA90 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC25.01■■□□□ 1.59
EFCC1Q9HA90 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
EFCC1Q9HA90 ABCB10P4-201ENST00000566803 2184 ntBASIC25.01■■□□□ 1.59
EFCC1Q9HA90 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
EFCC1Q9HA90 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC25.01■■□□□ 1.59
EFCC1Q9HA90 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
EFCC1Q9HA90 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
EFCC1Q9HA90 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC25.01■■□□□ 1.59
EFCC1Q9HA90 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
EFCC1Q9HA90 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC25.01■■□□□ 1.59
EFCC1Q9HA90 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
EFCC1Q9HA90 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC25.01■■□□□ 1.59
EFCC1Q9HA90 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
EFCC1Q9HA90 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
EFCC1Q9HA90 CNN2P6-201ENST00000439038 900 ntBASIC25■■□□□ 1.59
EFCC1Q9HA90 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC25■■□□□ 1.59
EFCC1Q9HA90 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC25■■□□□ 1.59
EFCC1Q9HA90 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
EFCC1Q9HA90 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
EFCC1Q9HA90 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC25■■□□□ 1.59
EFCC1Q9HA90 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC25■■□□□ 1.59
EFCC1Q9HA90 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
EFCC1Q9HA90 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
EFCC1Q9HA90 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC24.99■■□□□ 1.59
EFCC1Q9HA90 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC24.99■■□□□ 1.59
EFCC1Q9HA90 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
EFCC1Q9HA90 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC24.98■■□□□ 1.59
EFCC1Q9HA90 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC24.98■■□□□ 1.59
EFCC1Q9HA90 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
EFCC1Q9HA90 DUSP5P2-201ENST00000426873 1033 ntBASIC24.98■■□□□ 1.59
EFCC1Q9HA90 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC24.98■■□□□ 1.59
EFCC1Q9HA90 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
EFCC1Q9HA90 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC24.98■■□□□ 1.59
EFCC1Q9HA90 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC24.98■■□□□ 1.59
EFCC1Q9HA90 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC24.98■■□□□ 1.59
EFCC1Q9HA90 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
EFCC1Q9HA90 AC005224.4-201ENST00000583262 1652 ntBASIC24.97■■□□□ 1.59
EFCC1Q9HA90 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC24.97■■□□□ 1.59
EFCC1Q9HA90 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC24.97■■□□□ 1.59
EFCC1Q9HA90 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
EFCC1Q9HA90 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
EFCC1Q9HA90 AC098590.1-201ENST00000468126 897 ntBASIC24.97■■□□□ 1.59
EFCC1Q9HA90 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
EFCC1Q9HA90 AP001160.3-201ENST00000601484 763 ntBASIC24.97■■□□□ 1.59
EFCC1Q9HA90 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC24.97■■□□□ 1.59
EFCC1Q9HA90 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC24.97■■□□□ 1.59
EFCC1Q9HA90 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC24.96■■□□□ 1.59
EFCC1Q9HA90 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
EFCC1Q9HA90 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
EFCC1Q9HA90 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
EFCC1Q9HA90 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC24.96■■□□□ 1.59
EFCC1Q9HA90 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC24.96■■□□□ 1.59
EFCC1Q9HA90 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC24.96■■□□□ 1.59
EFCC1Q9HA90 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
EFCC1Q9HA90 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC24.96■■□□□ 1.59
EFCC1Q9HA90 APTR-203ENST00000430801 583 ntTSL 5 BASIC24.96■■□□□ 1.59
EFCC1Q9HA90 SLC7A5P1-201ENST00000568957 537 ntBASIC24.96■■□□□ 1.59
EFCC1Q9HA90 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC24.96■■□□□ 1.59
EFCC1Q9HA90 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC24.96■■□□□ 1.59
EFCC1Q9HA90 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
EFCC1Q9HA90 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC24.96■■□□□ 1.59
Retrieved 100 of 98,524 protein–RNA pairs in 90.2 ms