Protein–RNA interactions for Protein: Q9H9S0

NANOG, Homeobox protein NANOG, humanhuman

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NANOGQ9H9S0 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
NANOGQ9H9S0 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
NANOGQ9H9S0 USP45-205ENST00000472914 1617 ntTSL 5 BASIC20.35■□□□□ 0.85
NANOGQ9H9S0 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC20.34■□□□□ 0.85
NANOGQ9H9S0 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
NANOGQ9H9S0 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC20.34■□□□□ 0.85
NANOGQ9H9S0 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
NANOGQ9H9S0 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
NANOGQ9H9S0 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC20.34■□□□□ 0.85
NANOGQ9H9S0 MIR4787-201ENST00000607364 84 ntBASIC20.34■□□□□ 0.85
NANOGQ9H9S0 AC010997.5-201ENST00000609182 354 ntBASIC20.34■□□□□ 0.85
NANOGQ9H9S0 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
NANOGQ9H9S0 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC20.34■□□□□ 0.85
NANOGQ9H9S0 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
NANOGQ9H9S0 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
NANOGQ9H9S0 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC20.34■□□□□ 0.85
NANOGQ9H9S0 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
NANOGQ9H9S0 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
NANOGQ9H9S0 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
NANOGQ9H9S0 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC20.34■□□□□ 0.85
NANOGQ9H9S0 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
NANOGQ9H9S0 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC20.34■□□□□ 0.85
NANOGQ9H9S0 GTSE1-AS1-202ENST00000623117 1518 ntBASIC20.33■□□□□ 0.85
NANOGQ9H9S0 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
NANOGQ9H9S0 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
NANOGQ9H9S0 RNF165-205ENST00000588679 2904 ntBASIC20.33■□□□□ 0.85
NANOGQ9H9S0 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
NANOGQ9H9S0 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
NANOGQ9H9S0 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
NANOGQ9H9S0 MFF-203ENST00000349901 1716 ntTSL 2 BASIC20.33■□□□□ 0.84
NANOGQ9H9S0 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
NANOGQ9H9S0 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
NANOGQ9H9S0 EI24-211ENST00000534546 1544 ntTSL 2 BASIC20.32■□□□□ 0.84
NANOGQ9H9S0 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
NANOGQ9H9S0 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC20.32■□□□□ 0.84
NANOGQ9H9S0 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
NANOGQ9H9S0 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
NANOGQ9H9S0 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC20.32■□□□□ 0.84
NANOGQ9H9S0 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
NANOGQ9H9S0 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
NANOGQ9H9S0 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
NANOGQ9H9S0 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
NANOGQ9H9S0 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
NANOGQ9H9S0 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
NANOGQ9H9S0 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC20.32■□□□□ 0.84
NANOGQ9H9S0 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
NANOGQ9H9S0 AC104564.3-201ENST00000582367 638 ntBASIC20.32■□□□□ 0.84
NANOGQ9H9S0 OR7E47P-201ENST00000546390 1422 ntBASIC20.32■□□□□ 0.84
NANOGQ9H9S0 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
NANOGQ9H9S0 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
NANOGQ9H9S0 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
NANOGQ9H9S0 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
NANOGQ9H9S0 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC20.32■□□□□ 0.84
NANOGQ9H9S0 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
NANOGQ9H9S0 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
NANOGQ9H9S0 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC20.31■□□□□ 0.84
NANOGQ9H9S0 LSM4-201ENST00000252816 986 ntTSL 2 BASIC20.31■□□□□ 0.84
NANOGQ9H9S0 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
NANOGQ9H9S0 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC20.31■□□□□ 0.84
NANOGQ9H9S0 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
NANOGQ9H9S0 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
NANOGQ9H9S0 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
NANOGQ9H9S0 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC20.31■□□□□ 0.84
NANOGQ9H9S0 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
NANOGQ9H9S0 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
NANOGQ9H9S0 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
NANOGQ9H9S0 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
NANOGQ9H9S0 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
NANOGQ9H9S0 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
NANOGQ9H9S0 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC20.3■□□□□ 0.84
NANOGQ9H9S0 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC20.3■□□□□ 0.84
NANOGQ9H9S0 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC20.3■□□□□ 0.84
NANOGQ9H9S0 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
NANOGQ9H9S0 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
NANOGQ9H9S0 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
NANOGQ9H9S0 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
NANOGQ9H9S0 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
NANOGQ9H9S0 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
NANOGQ9H9S0 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC20.29■□□□□ 0.84
NANOGQ9H9S0 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC20.29■□□□□ 0.84
NANOGQ9H9S0 AC133637.1-201ENST00000624115 1537 ntBASIC20.29■□□□□ 0.84
NANOGQ9H9S0 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
NANOGQ9H9S0 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC20.29■□□□□ 0.84
NANOGQ9H9S0 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
NANOGQ9H9S0 AL451085.2-201ENST00000605085 799 ntBASIC20.29■□□□□ 0.84
NANOGQ9H9S0 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
NANOGQ9H9S0 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
NANOGQ9H9S0 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC20.29■□□□□ 0.84
NANOGQ9H9S0 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
NANOGQ9H9S0 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
NANOGQ9H9S0 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
NANOGQ9H9S0 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
NANOGQ9H9S0 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC20.28■□□□□ 0.84
NANOGQ9H9S0 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC20.28■□□□□ 0.84
NANOGQ9H9S0 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NANOGQ9H9S0 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NANOGQ9H9S0 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
NANOGQ9H9S0 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NANOGQ9H9S0 AC241377.3-202ENST00000626088 1088 ntBASIC20.28■□□□□ 0.84
NANOGQ9H9S0 AC241585.3-202ENST00000628937 1088 ntBASIC20.28■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 39.6 ms