Protein–RNA interactions for Protein: Q9C056

NKX6-2, Homeobox protein Nkx-6.2, humanhuman

Predicted RBP Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-2Q9C056 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
NKX6-2Q9C056 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC17.35■□□□□ 0.37
NKX6-2Q9C056 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
NKX6-2Q9C056 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC17.35■□□□□ 0.37
NKX6-2Q9C056 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
NKX6-2Q9C056 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
NKX6-2Q9C056 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
NKX6-2Q9C056 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
NKX6-2Q9C056 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
NKX6-2Q9C056 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
NKX6-2Q9C056 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC17.34■□□□□ 0.37
NKX6-2Q9C056 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC17.34■□□□□ 0.37
NKX6-2Q9C056 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC17.34■□□□□ 0.37
NKX6-2Q9C056 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
NKX6-2Q9C056 MACF1-219ENST00000484793 834 ntTSL 2 BASIC17.34■□□□□ 0.37
NKX6-2Q9C056 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
NKX6-2Q9C056 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC17.34■□□□□ 0.37
NKX6-2Q9C056 GFER-205ENST00000569451 517 ntTSL 5 BASIC17.34■□□□□ 0.37
NKX6-2Q9C056 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
NKX6-2Q9C056 MIR3648-2-201ENST00000581792 180 ntBASIC17.34■□□□□ 0.37
NKX6-2Q9C056 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
NKX6-2Q9C056 MIR3648-1-201ENST00000615959 180 ntBASIC17.34■□□□□ 0.37
NKX6-2Q9C056 GDI1-215ENST00000630693 786 ntTSL 4 BASIC17.34■□□□□ 0.37
NKX6-2Q9C056 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
NKX6-2Q9C056 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
NKX6-2Q9C056 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
NKX6-2Q9C056 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.37
NKX6-2Q9C056 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
NKX6-2Q9C056 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
NKX6-2Q9C056 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC17.33■□□□□ 0.36
NKX6-2Q9C056 METRNL-202ENST00000570778 967 ntTSL 5 BASIC17.33■□□□□ 0.36
NKX6-2Q9C056 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
NKX6-2Q9C056 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
NKX6-2Q9C056 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
NKX6-2Q9C056 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
NKX6-2Q9C056 FEM1AP4-201ENST00000443167 1987 ntBASIC17.33■□□□□ 0.36
NKX6-2Q9C056 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
NKX6-2Q9C056 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
NKX6-2Q9C056 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
NKX6-2Q9C056 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
NKX6-2Q9C056 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
NKX6-2Q9C056 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
NKX6-2Q9C056 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NKX6-2Q9C056 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NKX6-2Q9C056 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
NKX6-2Q9C056 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
NKX6-2Q9C056 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
NKX6-2Q9C056 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
NKX6-2Q9C056 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
NKX6-2Q9C056 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NKX6-2Q9C056 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC17.32■□□□□ 0.36
NKX6-2Q9C056 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NKX6-2Q9C056 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NKX6-2Q9C056 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NKX6-2Q9C056 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC17.32■□□□□ 0.36
NKX6-2Q9C056 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
NKX6-2Q9C056 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
NKX6-2Q9C056 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
NKX6-2Q9C056 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NKX6-2Q9C056 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC17.31■□□□□ 0.36
NKX6-2Q9C056 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC17.31■□□□□ 0.36
NKX6-2Q9C056 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
NKX6-2Q9C056 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC17.31■□□□□ 0.36
NKX6-2Q9C056 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
NKX6-2Q9C056 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
NKX6-2Q9C056 BX323043.1-201ENST00000641006 1765 ntBASIC17.31■□□□□ 0.36
NKX6-2Q9C056 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
NKX6-2Q9C056 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NKX6-2Q9C056 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NKX6-2Q9C056 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
NKX6-2Q9C056 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NKX6-2Q9C056 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
NKX6-2Q9C056 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
NKX6-2Q9C056 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NKX6-2Q9C056 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC17.31■□□□□ 0.36
NKX6-2Q9C056 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NKX6-2Q9C056 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NKX6-2Q9C056 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC17.3■□□□□ 0.36
NKX6-2Q9C056 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NKX6-2Q9C056 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
NKX6-2Q9C056 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
NKX6-2Q9C056 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NKX6-2Q9C056 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NKX6-2Q9C056 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
NKX6-2Q9C056 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NKX6-2Q9C056 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
NKX6-2Q9C056 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
NKX6-2Q9C056 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NKX6-2Q9C056 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NKX6-2Q9C056 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
NKX6-2Q9C056 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
NKX6-2Q9C056 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
NKX6-2Q9C056 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
NKX6-2Q9C056 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NKX6-2Q9C056 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NKX6-2Q9C056 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
NKX6-2Q9C056 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NKX6-2Q9C056 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NKX6-2Q9C056 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
NKX6-2Q9C056 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms