Protein–RNA interactions for Protein: Q9BQW3

EBF4, Transcription factor COE4, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF4Q9BQW3 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC20.92■□□□□ 0.94
EBF4Q9BQW3 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
EBF4Q9BQW3 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
EBF4Q9BQW3 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC20.92■□□□□ 0.94
EBF4Q9BQW3 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC20.92■□□□□ 0.94
EBF4Q9BQW3 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
EBF4Q9BQW3 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
EBF4Q9BQW3 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC20.91■□□□□ 0.94
EBF4Q9BQW3 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
EBF4Q9BQW3 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
EBF4Q9BQW3 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC20.91■□□□□ 0.94
EBF4Q9BQW3 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
EBF4Q9BQW3 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
EBF4Q9BQW3 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
EBF4Q9BQW3 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
EBF4Q9BQW3 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
EBF4Q9BQW3 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC20.9■□□□□ 0.94
EBF4Q9BQW3 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC20.9■□□□□ 0.94
EBF4Q9BQW3 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
EBF4Q9BQW3 VGF-203ENST00000611537 1622 ntTSL 5 BASIC20.9■□□□□ 0.94
EBF4Q9BQW3 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
EBF4Q9BQW3 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
EBF4Q9BQW3 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
EBF4Q9BQW3 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC20.9■□□□□ 0.94
EBF4Q9BQW3 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC20.9■□□□□ 0.94
EBF4Q9BQW3 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
EBF4Q9BQW3 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
EBF4Q9BQW3 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
EBF4Q9BQW3 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC20.9■□□□□ 0.94
EBF4Q9BQW3 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
EBF4Q9BQW3 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
EBF4Q9BQW3 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
EBF4Q9BQW3 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
EBF4Q9BQW3 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC20.9■□□□□ 0.94
EBF4Q9BQW3 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
EBF4Q9BQW3 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC20.89■□□□□ 0.94
EBF4Q9BQW3 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
EBF4Q9BQW3 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC20.89■□□□□ 0.94
EBF4Q9BQW3 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC20.89■□□□□ 0.94
EBF4Q9BQW3 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
EBF4Q9BQW3 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
EBF4Q9BQW3 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
EBF4Q9BQW3 YBX1P4-201ENST00000392794 808 ntBASIC20.89■□□□□ 0.93
EBF4Q9BQW3 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
EBF4Q9BQW3 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
EBF4Q9BQW3 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
EBF4Q9BQW3 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC20.89■□□□□ 0.93
EBF4Q9BQW3 DYM-203ENST00000442713 2147 ntTSL 2 BASIC20.89■□□□□ 0.93
EBF4Q9BQW3 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
EBF4Q9BQW3 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC20.88■□□□□ 0.93
EBF4Q9BQW3 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
EBF4Q9BQW3 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
EBF4Q9BQW3 AL499627.2-201ENST00000606283 725 ntBASIC20.88■□□□□ 0.93
EBF4Q9BQW3 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
EBF4Q9BQW3 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC20.88■□□□□ 0.93
EBF4Q9BQW3 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
EBF4Q9BQW3 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC20.87■□□□□ 0.93
EBF4Q9BQW3 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
EBF4Q9BQW3 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC20.87■□□□□ 0.93
EBF4Q9BQW3 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
EBF4Q9BQW3 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC20.87■□□□□ 0.93
EBF4Q9BQW3 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
EBF4Q9BQW3 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
EBF4Q9BQW3 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC20.87■□□□□ 0.93
EBF4Q9BQW3 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC20.87■□□□□ 0.93
EBF4Q9BQW3 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
EBF4Q9BQW3 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC20.87■□□□□ 0.93
EBF4Q9BQW3 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC20.87■□□□□ 0.93
EBF4Q9BQW3 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC20.87■□□□□ 0.93
EBF4Q9BQW3 AL031848.2-201ENST00000607670 837 ntBASIC20.87■□□□□ 0.93
EBF4Q9BQW3 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC20.87■□□□□ 0.93
EBF4Q9BQW3 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
EBF4Q9BQW3 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC20.87■□□□□ 0.93
EBF4Q9BQW3 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
EBF4Q9BQW3 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
EBF4Q9BQW3 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
EBF4Q9BQW3 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
EBF4Q9BQW3 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC20.86■□□□□ 0.93
EBF4Q9BQW3 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
EBF4Q9BQW3 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
EBF4Q9BQW3 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
EBF4Q9BQW3 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
EBF4Q9BQW3 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
EBF4Q9BQW3 AC079089.2-201ENST00000531211 1277 ntBASIC20.86■□□□□ 0.93
EBF4Q9BQW3 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC20.86■□□□□ 0.93
EBF4Q9BQW3 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC20.86■□□□□ 0.93
EBF4Q9BQW3 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
EBF4Q9BQW3 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC20.86■□□□□ 0.93
EBF4Q9BQW3 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
EBF4Q9BQW3 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC20.86■□□□□ 0.93
EBF4Q9BQW3 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
EBF4Q9BQW3 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
EBF4Q9BQW3 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
EBF4Q9BQW3 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
EBF4Q9BQW3 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
EBF4Q9BQW3 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
EBF4Q9BQW3 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
EBF4Q9BQW3 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
EBF4Q9BQW3 FEM1AP1-201ENST00000431297 1995 ntBASIC20.85■□□□□ 0.93
EBF4Q9BQW3 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 145.6 ms