Protein–RNA interactions for Protein: Q8IYR6

TMEFF1, Tomoregulin-1, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1Q8IYR6 TBCB-214ENST00000629269 413 ntTSL 5 BASIC21.42■■□□□ 1.02
TMEFF1Q8IYR6 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
TMEFF1Q8IYR6 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC21.41■■□□□ 1.02
TMEFF1Q8IYR6 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC21.41■■□□□ 1.02
TMEFF1Q8IYR6 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC21.41■■□□□ 1.02
TMEFF1Q8IYR6 AC010141.2-201ENST00000452426 721 ntBASIC21.41■■□□□ 1.02
TMEFF1Q8IYR6 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC21.41■■□□□ 1.02
TMEFF1Q8IYR6 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC21.41■■□□□ 1.02
TMEFF1Q8IYR6 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC21.41■■□□□ 1.02
TMEFF1Q8IYR6 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
TMEFF1Q8IYR6 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
TMEFF1Q8IYR6 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
TMEFF1Q8IYR6 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
TMEFF1Q8IYR6 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
TMEFF1Q8IYR6 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
TMEFF1Q8IYR6 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC21.4■■□□□ 1.02
TMEFF1Q8IYR6 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC21.4■■□□□ 1.02
TMEFF1Q8IYR6 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
TMEFF1Q8IYR6 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
TMEFF1Q8IYR6 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC21.4■■□□□ 1.02
TMEFF1Q8IYR6 BMP1-204ENST00000397814 836 ntTSL 4 BASIC21.4■■□□□ 1.02
TMEFF1Q8IYR6 APTR-203ENST00000430801 583 ntTSL 5 BASIC21.4■■□□□ 1.02
TMEFF1Q8IYR6 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
TMEFF1Q8IYR6 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.02
TMEFF1Q8IYR6 THRA-202ENST00000394121 2260 ntTSL 2 BASIC21.39■■□□□ 1.02
TMEFF1Q8IYR6 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
TMEFF1Q8IYR6 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC21.39■■□□□ 1.01
TMEFF1Q8IYR6 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
TMEFF1Q8IYR6 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC21.39■■□□□ 1.01
TMEFF1Q8IYR6 AC138907.5-202ENST00000569484 235 ntBASIC21.39■■□□□ 1.01
TMEFF1Q8IYR6 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC21.39■■□□□ 1.01
TMEFF1Q8IYR6 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC21.39■■□□□ 1.01
TMEFF1Q8IYR6 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
TMEFF1Q8IYR6 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC21.39■■□□□ 1.01
TMEFF1Q8IYR6 AP004607.7-201ENST00000527152 1677 ntBASIC21.39■■□□□ 1.01
TMEFF1Q8IYR6 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC21.39■■□□□ 1.01
TMEFF1Q8IYR6 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC21.38■■□□□ 1.01
TMEFF1Q8IYR6 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
TMEFF1Q8IYR6 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC21.38■■□□□ 1.01
TMEFF1Q8IYR6 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
TMEFF1Q8IYR6 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC21.38■■□□□ 1.01
TMEFF1Q8IYR6 AC073210.2-201ENST00000430369 194 ntBASIC21.38■■□□□ 1.01
TMEFF1Q8IYR6 AC079089.2-201ENST00000531211 1277 ntBASIC21.38■■□□□ 1.01
TMEFF1Q8IYR6 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC21.38■■□□□ 1.01
TMEFF1Q8IYR6 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
TMEFF1Q8IYR6 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
TMEFF1Q8IYR6 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC21.38■■□□□ 1.01
TMEFF1Q8IYR6 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
TMEFF1Q8IYR6 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
TMEFF1Q8IYR6 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
TMEFF1Q8IYR6 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
TMEFF1Q8IYR6 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC21.37■■□□□ 1.01
TMEFF1Q8IYR6 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
TMEFF1Q8IYR6 KRT18P20-201ENST00000548986 1279 ntBASIC21.37■■□□□ 1.01
TMEFF1Q8IYR6 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC21.37■■□□□ 1.01
TMEFF1Q8IYR6 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC21.37■■□□□ 1.01
TMEFF1Q8IYR6 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
TMEFF1Q8IYR6 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC21.37■■□□□ 1.01
TMEFF1Q8IYR6 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
TMEFF1Q8IYR6 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
TMEFF1Q8IYR6 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
TMEFF1Q8IYR6 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC21.36■■□□□ 1.01
TMEFF1Q8IYR6 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
TMEFF1Q8IYR6 FXN-202ENST00000396364 980 ntTSL 5 BASIC21.36■■□□□ 1.01
TMEFF1Q8IYR6 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC21.36■■□□□ 1.01
TMEFF1Q8IYR6 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
TMEFF1Q8IYR6 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
TMEFF1Q8IYR6 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
TMEFF1Q8IYR6 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
TMEFF1Q8IYR6 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
TMEFF1Q8IYR6 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
TMEFF1Q8IYR6 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC21.35■■□□□ 1.01
TMEFF1Q8IYR6 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
TMEFF1Q8IYR6 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
TMEFF1Q8IYR6 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC21.35■■□□□ 1.01
TMEFF1Q8IYR6 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
TMEFF1Q8IYR6 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC21.35■■□□□ 1.01
TMEFF1Q8IYR6 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
TMEFF1Q8IYR6 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC21.35■■□□□ 1.01
TMEFF1Q8IYR6 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
TMEFF1Q8IYR6 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
TMEFF1Q8IYR6 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC21.35■■□□□ 1.01
TMEFF1Q8IYR6 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
TMEFF1Q8IYR6 LINC01960-201ENST00000563759 1884 ntBASIC21.35■■□□□ 1.01
TMEFF1Q8IYR6 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
TMEFF1Q8IYR6 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
TMEFF1Q8IYR6 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC21.34■■□□□ 1.01
TMEFF1Q8IYR6 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC21.34■■□□□ 1.01
TMEFF1Q8IYR6 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
TMEFF1Q8IYR6 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
TMEFF1Q8IYR6 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC21.34■■□□□ 1.01
TMEFF1Q8IYR6 DET1-205ENST00000558413 583 ntTSL 4 BASIC21.34■■□□□ 1.01
TMEFF1Q8IYR6 MIR4758-201ENST00000577688 71 ntBASIC21.34■■□□□ 1.01
TMEFF1Q8IYR6 AC008687.6-201ENST00000596318 630 ntBASIC21.34■■□□□ 1.01
TMEFF1Q8IYR6 AC013268.1-206ENST00000638368 961 ntBASIC21.34■■□□□ 1.01
TMEFF1Q8IYR6 AC112229.1-201ENST00000639295 961 ntBASIC21.34■■□□□ 1.01
TMEFF1Q8IYR6 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC21.34■■□□□ 1.01
TMEFF1Q8IYR6 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
TMEFF1Q8IYR6 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC21.33■■□□□ 1.01
TMEFF1Q8IYR6 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 66 ms