Protein–RNA interactions for Protein: P07988

SFTPB, Pulmonary surfactant-associated protein B, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPBP07988 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
SFTPBP07988 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
SFTPBP07988 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC18.56■□□□□ 0.56
SFTPBP07988 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC18.56■□□□□ 0.56
SFTPBP07988 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SFTPBP07988 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SFTPBP07988 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC18.56■□□□□ 0.56
SFTPBP07988 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SFTPBP07988 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SFTPBP07988 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC18.55■□□□□ 0.56
SFTPBP07988 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SFTPBP07988 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
SFTPBP07988 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SFTPBP07988 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
SFTPBP07988 GTSE1-AS1-202ENST00000623117 1518 ntBASIC18.55■□□□□ 0.56
SFTPBP07988 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SFTPBP07988 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SFTPBP07988 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SFTPBP07988 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC18.55■□□□□ 0.56
SFTPBP07988 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SFTPBP07988 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SFTPBP07988 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
SFTPBP07988 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC18.55■□□□□ 0.56
SFTPBP07988 PBX2P1-201ENST00000493219 1291 ntBASIC18.55■□□□□ 0.56
SFTPBP07988 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SFTPBP07988 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC18.55■□□□□ 0.56
SFTPBP07988 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SFTPBP07988 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC18.55■□□□□ 0.56
SFTPBP07988 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SFTPBP07988 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
SFTPBP07988 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC18.55■□□□□ 0.56
SFTPBP07988 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
SFTPBP07988 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SFTPBP07988 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SFTPBP07988 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC18.55■□□□□ 0.56
SFTPBP07988 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SFTPBP07988 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC18.54■□□□□ 0.56
SFTPBP07988 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC18.54■□□□□ 0.56
SFTPBP07988 FBXW4P1-201ENST00000426721 2239 ntBASIC18.54■□□□□ 0.56
SFTPBP07988 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC18.54■□□□□ 0.56
SFTPBP07988 BID-212ENST00000614949 1988 ntTSL 5 BASIC18.54■□□□□ 0.56
SFTPBP07988 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SFTPBP07988 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
SFTPBP07988 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SFTPBP07988 AC099791.2-201ENST00000605725 427 ntBASIC18.54■□□□□ 0.56
SFTPBP07988 CA15P2-201ENST00000611168 834 ntBASIC18.54■□□□□ 0.56
SFTPBP07988 AC241377.3-202ENST00000626088 1088 ntBASIC18.54■□□□□ 0.56
SFTPBP07988 AC241585.3-202ENST00000628937 1088 ntBASIC18.54■□□□□ 0.56
SFTPBP07988 AC245100.8-202ENST00000629247 1058 ntBASIC18.54■□□□□ 0.56
SFTPBP07988 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
SFTPBP07988 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
SFTPBP07988 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SFTPBP07988 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
SFTPBP07988 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SFTPBP07988 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SFTPBP07988 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SFTPBP07988 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SFTPBP07988 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SFTPBP07988 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SFTPBP07988 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC18.53■□□□□ 0.56
SFTPBP07988 AL136162.1-201ENST00000607711 1078 ntBASIC18.53■□□□□ 0.56
SFTPBP07988 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SFTPBP07988 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SFTPBP07988 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
SFTPBP07988 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
SFTPBP07988 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
SFTPBP07988 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
SFTPBP07988 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
SFTPBP07988 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
SFTPBP07988 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC18.52■□□□□ 0.56
SFTPBP07988 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
SFTPBP07988 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SFTPBP07988 AC006455.2-201ENST00000429931 906 ntBASIC18.52■□□□□ 0.56
SFTPBP07988 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC18.52■□□□□ 0.56
SFTPBP07988 AC106739.1-201ENST00000617035 715 ntBASIC18.52■□□□□ 0.56
SFTPBP07988 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SFTPBP07988 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
SFTPBP07988 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.55
SFTPBP07988 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
SFTPBP07988 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC18.52■□□□□ 0.55
SFTPBP07988 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC18.51■□□□□ 0.55
SFTPBP07988 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC18.51■□□□□ 0.55
SFTPBP07988 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
SFTPBP07988 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
SFTPBP07988 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
SFTPBP07988 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC18.51■□□□□ 0.55
SFTPBP07988 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC18.51■□□□□ 0.55
SFTPBP07988 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
SFTPBP07988 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC18.51■□□□□ 0.55
SFTPBP07988 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SFTPBP07988 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
SFTPBP07988 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC18.51■□□□□ 0.55
SFTPBP07988 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SFTPBP07988 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SFTPBP07988 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC18.51■□□□□ 0.55
SFTPBP07988 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC18.51■□□□□ 0.55
SFTPBP07988 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC18.51■□□□□ 0.55
SFTPBP07988 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC18.51■□□□□ 0.55
SFTPBP07988 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SFTPBP07988 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC18.5■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms