Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC18.82■□□□□ 0.6
RHBDD3Q9Y3P4 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC18.82■□□□□ 0.6
RHBDD3Q9Y3P4 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC18.82■□□□□ 0.6
RHBDD3Q9Y3P4 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC18.82■□□□□ 0.6
RHBDD3Q9Y3P4 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
RHBDD3Q9Y3P4 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RHBDD3Q9Y3P4 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
RHBDD3Q9Y3P4 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC18.82■□□□□ 0.6
RHBDD3Q9Y3P4 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
RHBDD3Q9Y3P4 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RHBDD3Q9Y3P4 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
RHBDD3Q9Y3P4 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
RHBDD3Q9Y3P4 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
RHBDD3Q9Y3P4 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
RHBDD3Q9Y3P4 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
RHBDD3Q9Y3P4 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
RHBDD3Q9Y3P4 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC18.81■□□□□ 0.6
RHBDD3Q9Y3P4 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC18.81■□□□□ 0.6
RHBDD3Q9Y3P4 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC18.81■□□□□ 0.6
RHBDD3Q9Y3P4 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC18.81■□□□□ 0.6
RHBDD3Q9Y3P4 CA15P2-201ENST00000611168 834 ntBASIC18.81■□□□□ 0.6
RHBDD3Q9Y3P4 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC18.81■□□□□ 0.6
RHBDD3Q9Y3P4 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RHBDD3Q9Y3P4 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC18.8■□□□□ 0.6
RHBDD3Q9Y3P4 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
RHBDD3Q9Y3P4 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC18.8■□□□□ 0.6
RHBDD3Q9Y3P4 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC18.8■□□□□ 0.6
RHBDD3Q9Y3P4 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC18.8■□□□□ 0.6
RHBDD3Q9Y3P4 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RHBDD3Q9Y3P4 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
RHBDD3Q9Y3P4 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RHBDD3Q9Y3P4 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC18.8■□□□□ 0.6
RHBDD3Q9Y3P4 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC18.8■□□□□ 0.6
RHBDD3Q9Y3P4 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
RHBDD3Q9Y3P4 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RHBDD3Q9Y3P4 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
RHBDD3Q9Y3P4 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC18.8■□□□□ 0.6
RHBDD3Q9Y3P4 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RHBDD3Q9Y3P4 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RHBDD3Q9Y3P4 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RHBDD3Q9Y3P4 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
RHBDD3Q9Y3P4 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RHBDD3Q9Y3P4 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC18.79■□□□□ 0.6
RHBDD3Q9Y3P4 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC18.79■□□□□ 0.6
RHBDD3Q9Y3P4 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC18.79■□□□□ 0.6
RHBDD3Q9Y3P4 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC18.79■□□□□ 0.6
RHBDD3Q9Y3P4 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RHBDD3Q9Y3P4 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RHBDD3Q9Y3P4 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
RHBDD3Q9Y3P4 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
RHBDD3Q9Y3P4 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RHBDD3Q9Y3P4 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
RHBDD3Q9Y3P4 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
RHBDD3Q9Y3P4 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
RHBDD3Q9Y3P4 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RHBDD3Q9Y3P4 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RHBDD3Q9Y3P4 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RHBDD3Q9Y3P4 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RHBDD3Q9Y3P4 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC18.78■□□□□ 0.6
RHBDD3Q9Y3P4 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
RHBDD3Q9Y3P4 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RHBDD3Q9Y3P4 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
RHBDD3Q9Y3P4 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RHBDD3Q9Y3P4 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RHBDD3Q9Y3P4 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
RHBDD3Q9Y3P4 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
RHBDD3Q9Y3P4 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RHBDD3Q9Y3P4 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC18.78■□□□□ 0.6
RHBDD3Q9Y3P4 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
RHBDD3Q9Y3P4 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RHBDD3Q9Y3P4 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RHBDD3Q9Y3P4 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RHBDD3Q9Y3P4 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC18.77■□□□□ 0.6
RHBDD3Q9Y3P4 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RHBDD3Q9Y3P4 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
RHBDD3Q9Y3P4 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC18.77■□□□□ 0.6
RHBDD3Q9Y3P4 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
RHBDD3Q9Y3P4 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC18.77■□□□□ 0.6
RHBDD3Q9Y3P4 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
RHBDD3Q9Y3P4 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
RHBDD3Q9Y3P4 AC131212.1-201ENST00000613771 668 ntBASIC18.77■□□□□ 0.6
RHBDD3Q9Y3P4 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC18.77■□□□□ 0.6
RHBDD3Q9Y3P4 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RHBDD3Q9Y3P4 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RHBDD3Q9Y3P4 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
RHBDD3Q9Y3P4 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
RHBDD3Q9Y3P4 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC18.76■□□□□ 0.59
RHBDD3Q9Y3P4 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC18.76■□□□□ 0.59
RHBDD3Q9Y3P4 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC18.76■□□□□ 0.59
RHBDD3Q9Y3P4 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC18.76■□□□□ 0.59
RHBDD3Q9Y3P4 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC18.76■□□□□ 0.59
RHBDD3Q9Y3P4 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RHBDD3Q9Y3P4 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
RHBDD3Q9Y3P4 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC18.76■□□□□ 0.59
RHBDD3Q9Y3P4 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
RHBDD3Q9Y3P4 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
RHBDD3Q9Y3P4 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RHBDD3Q9Y3P4 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
RHBDD3Q9Y3P4 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RHBDD3Q9Y3P4 PTCHD3P2-201ENST00000424937 1205 ntBASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms