Protein–RNA interactions for Protein: Q9HBT6

CDH20, Cadherin-20, humanhuman

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20Q9HBT6 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CDH20Q9HBT6 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CDH20Q9HBT6 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CDH20Q9HBT6 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC18.78■□□□□ 0.6
CDH20Q9HBT6 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC18.78■□□□□ 0.6
CDH20Q9HBT6 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CDH20Q9HBT6 GUK1-205ENST00000366722 850 ntTSL 3 BASIC18.78■□□□□ 0.6
CDH20Q9HBT6 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CDH20Q9HBT6 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC18.78■□□□□ 0.6
CDH20Q9HBT6 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CDH20Q9HBT6 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CDH20Q9HBT6 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CDH20Q9HBT6 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CDH20Q9HBT6 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CDH20Q9HBT6 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC18.77■□□□□ 0.6
CDH20Q9HBT6 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CDH20Q9HBT6 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC18.77■□□□□ 0.6
CDH20Q9HBT6 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CDH20Q9HBT6 NME4-202ENST00000382940 766 ntTSL 3 BASIC18.77■□□□□ 0.6
CDH20Q9HBT6 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC18.77■□□□□ 0.6
CDH20Q9HBT6 NME4-211ENST00000620944 1193 ntTSL 2 BASIC18.77■□□□□ 0.6
CDH20Q9HBT6 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CDH20Q9HBT6 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CDH20Q9HBT6 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CDH20Q9HBT6 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CDH20Q9HBT6 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
CDH20Q9HBT6 AC139530.1-201ENST00000575312 1977 ntBASIC18.77■□□□□ 0.59
CDH20Q9HBT6 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
CDH20Q9HBT6 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
CDH20Q9HBT6 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
CDH20Q9HBT6 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CDH20Q9HBT6 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC18.76■□□□□ 0.59
CDH20Q9HBT6 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
CDH20Q9HBT6 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC18.76■□□□□ 0.59
CDH20Q9HBT6 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CDH20Q9HBT6 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CDH20Q9HBT6 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CDH20Q9HBT6 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CDH20Q9HBT6 TOP1MT-201ENST00000329245 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CDH20Q9HBT6 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC18.76■□□□□ 0.59
CDH20Q9HBT6 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CDH20Q9HBT6 ZNRF2P3-201ENST00000424200 374 ntBASIC18.76■□□□□ 0.59
CDH20Q9HBT6 LGR4-203ENST00000480977 492 ntTSL 2 BASIC18.76■□□□□ 0.59
CDH20Q9HBT6 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC18.76■□□□□ 0.59
CDH20Q9HBT6 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
CDH20Q9HBT6 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CDH20Q9HBT6 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CDH20Q9HBT6 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CDH20Q9HBT6 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC18.75■□□□□ 0.59
CDH20Q9HBT6 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CDH20Q9HBT6 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CDH20Q9HBT6 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
CDH20Q9HBT6 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CDH20Q9HBT6 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
CDH20Q9HBT6 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
CDH20Q9HBT6 MFF-208ENST00000409616 1247 ntTSL 5 BASIC18.75■□□□□ 0.59
CDH20Q9HBT6 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC18.75■□□□□ 0.59
CDH20Q9HBT6 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC18.75■□□□□ 0.59
CDH20Q9HBT6 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC18.75■□□□□ 0.59
CDH20Q9HBT6 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC18.75■□□□□ 0.59
CDH20Q9HBT6 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC18.75■□□□□ 0.59
CDH20Q9HBT6 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
CDH20Q9HBT6 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CDH20Q9HBT6 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC18.75■□□□□ 0.59
CDH20Q9HBT6 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CDH20Q9HBT6 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC18.74■□□□□ 0.59
CDH20Q9HBT6 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC18.74■□□□□ 0.59
CDH20Q9HBT6 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CDH20Q9HBT6 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
CDH20Q9HBT6 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
CDH20Q9HBT6 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CDH20Q9HBT6 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC18.74■□□□□ 0.59
CDH20Q9HBT6 GUSBP5-202ENST00000510805 1989 ntBASIC18.74■□□□□ 0.59
CDH20Q9HBT6 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
CDH20Q9HBT6 AC012414.1-201ENST00000556676 535 ntBASIC18.74■□□□□ 0.59
CDH20Q9HBT6 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC18.74■□□□□ 0.59
CDH20Q9HBT6 AL354811.1-201ENST00000610286 706 ntBASIC18.74■□□□□ 0.59
CDH20Q9HBT6 AL358852.1-201ENST00000623174 1268 ntBASIC18.74■□□□□ 0.59
CDH20Q9HBT6 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC18.74■□□□□ 0.59
CDH20Q9HBT6 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
CDH20Q9HBT6 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
CDH20Q9HBT6 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC18.73■□□□□ 0.59
CDH20Q9HBT6 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CDH20Q9HBT6 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CDH20Q9HBT6 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CDH20Q9HBT6 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC18.73■□□□□ 0.59
CDH20Q9HBT6 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC18.73■□□□□ 0.59
CDH20Q9HBT6 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
CDH20Q9HBT6 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CDH20Q9HBT6 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CDH20Q9HBT6 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CDH20Q9HBT6 SMUG1P1-201ENST00000590640 811 ntBASIC18.73■□□□□ 0.59
CDH20Q9HBT6 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC18.73■□□□□ 0.59
CDH20Q9HBT6 AC080038.3-201ENST00000623346 1952 ntBASIC18.73■□□□□ 0.59
CDH20Q9HBT6 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CDH20Q9HBT6 LINC00526-201ENST00000581067 1875 ntBASIC18.73■□□□□ 0.59
CDH20Q9HBT6 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CDH20Q9HBT6 MPST-204ENST00000404393 1329 ntTSL 5 BASIC18.73■□□□□ 0.59
CDH20Q9HBT6 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CDH20Q9HBT6 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC18.73■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 60.2 ms