Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC20.27■□□□□ 0.83
SIMC1Q8NDZ2 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC20.27■□□□□ 0.83
SIMC1Q8NDZ2 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
SIMC1Q8NDZ2 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC20.26■□□□□ 0.83
SIMC1Q8NDZ2 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
SIMC1Q8NDZ2 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC20.26■□□□□ 0.83
SIMC1Q8NDZ2 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC20.26■□□□□ 0.83
SIMC1Q8NDZ2 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
SIMC1Q8NDZ2 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SIMC1Q8NDZ2 AC133561.4-201ENST00000566112 224 ntBASIC20.26■□□□□ 0.83
SIMC1Q8NDZ2 AC126544.1-201ENST00000580842 1059 ntBASIC20.26■□□□□ 0.83
SIMC1Q8NDZ2 AC005837.3-201ENST00000612163 286 ntBASIC20.26■□□□□ 0.83
SIMC1Q8NDZ2 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SIMC1Q8NDZ2 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SIMC1Q8NDZ2 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC20.26■□□□□ 0.83
SIMC1Q8NDZ2 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC20.26■□□□□ 0.83
SIMC1Q8NDZ2 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
SIMC1Q8NDZ2 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
SIMC1Q8NDZ2 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC20.25■□□□□ 0.83
SIMC1Q8NDZ2 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SIMC1Q8NDZ2 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SIMC1Q8NDZ2 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC20.25■□□□□ 0.83
SIMC1Q8NDZ2 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC20.25■□□□□ 0.83
SIMC1Q8NDZ2 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC20.25■□□□□ 0.83
SIMC1Q8NDZ2 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SIMC1Q8NDZ2 AC010141.3-201ENST00000456659 717 ntBASIC20.25■□□□□ 0.83
SIMC1Q8NDZ2 AP005435.1-201ENST00000529293 1178 ntBASIC20.25■□□□□ 0.83
SIMC1Q8NDZ2 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC20.25■□□□□ 0.83
SIMC1Q8NDZ2 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC20.25■□□□□ 0.83
SIMC1Q8NDZ2 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
SIMC1Q8NDZ2 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC20.25■□□□□ 0.83
SIMC1Q8NDZ2 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SIMC1Q8NDZ2 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC20.25■□□□□ 0.83
SIMC1Q8NDZ2 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SIMC1Q8NDZ2 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
SIMC1Q8NDZ2 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SIMC1Q8NDZ2 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC20.24■□□□□ 0.83
SIMC1Q8NDZ2 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC20.24■□□□□ 0.83
SIMC1Q8NDZ2 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
SIMC1Q8NDZ2 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SIMC1Q8NDZ2 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SIMC1Q8NDZ2 AC079089.2-201ENST00000531211 1277 ntBASIC20.24■□□□□ 0.83
SIMC1Q8NDZ2 AC027682.1-201ENST00000562846 899 ntBASIC20.24■□□□□ 0.83
SIMC1Q8NDZ2 AC068587.7-201ENST00000641602 218 ntBASIC20.24■□□□□ 0.83
SIMC1Q8NDZ2 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC20.24■□□□□ 0.83
SIMC1Q8NDZ2 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC20.24■□□□□ 0.83
SIMC1Q8NDZ2 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
SIMC1Q8NDZ2 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
SIMC1Q8NDZ2 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SIMC1Q8NDZ2 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
SIMC1Q8NDZ2 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
SIMC1Q8NDZ2 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SIMC1Q8NDZ2 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
SIMC1Q8NDZ2 AC092053.2-201ENST00000640557 1818 ntBASIC20.23■□□□□ 0.83
SIMC1Q8NDZ2 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC20.23■□□□□ 0.83
SIMC1Q8NDZ2 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC20.23■□□□□ 0.83
SIMC1Q8NDZ2 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC20.23■□□□□ 0.83
SIMC1Q8NDZ2 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
SIMC1Q8NDZ2 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC20.23■□□□□ 0.83
SIMC1Q8NDZ2 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
SIMC1Q8NDZ2 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
SIMC1Q8NDZ2 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC20.23■□□□□ 0.83
SIMC1Q8NDZ2 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SIMC1Q8NDZ2 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC20.22■□□□□ 0.83
SIMC1Q8NDZ2 RASA4CP-201ENST00000424092 1398 ntBASIC20.22■□□□□ 0.83
SIMC1Q8NDZ2 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SIMC1Q8NDZ2 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SIMC1Q8NDZ2 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC20.22■□□□□ 0.83
SIMC1Q8NDZ2 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC20.22■□□□□ 0.83
SIMC1Q8NDZ2 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SIMC1Q8NDZ2 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SIMC1Q8NDZ2 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC20.22■□□□□ 0.83
SIMC1Q8NDZ2 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC20.22■□□□□ 0.83
SIMC1Q8NDZ2 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC20.22■□□□□ 0.83
SIMC1Q8NDZ2 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC20.22■□□□□ 0.83
SIMC1Q8NDZ2 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC20.22■□□□□ 0.83
SIMC1Q8NDZ2 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
SIMC1Q8NDZ2 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SIMC1Q8NDZ2 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC20.22■□□□□ 0.83
SIMC1Q8NDZ2 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SIMC1Q8NDZ2 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC20.22■□□□□ 0.83
SIMC1Q8NDZ2 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
SIMC1Q8NDZ2 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
SIMC1Q8NDZ2 OXCT2P1-201ENST00000447263 1535 ntBASIC20.22■□□□□ 0.83
SIMC1Q8NDZ2 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SIMC1Q8NDZ2 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC20.21■□□□□ 0.83
SIMC1Q8NDZ2 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SIMC1Q8NDZ2 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SIMC1Q8NDZ2 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
SIMC1Q8NDZ2 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SIMC1Q8NDZ2 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC20.21■□□□□ 0.83
SIMC1Q8NDZ2 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SIMC1Q8NDZ2 GRAMD4P2-201ENST00000423297 1097 ntBASIC20.21■□□□□ 0.83
SIMC1Q8NDZ2 STOX2-205ENST00000513034 807 ntTSL 3 BASIC20.21■□□□□ 0.83
SIMC1Q8NDZ2 AC142381.2-201ENST00000566120 298 ntBASIC20.21■□□□□ 0.83
SIMC1Q8NDZ2 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC20.21■□□□□ 0.83
SIMC1Q8NDZ2 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC20.21■□□□□ 0.83
SIMC1Q8NDZ2 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
SIMC1Q8NDZ2 TSPY26P-201ENST00000476365 1326 ntBASIC20.21■□□□□ 0.83
SIMC1Q8NDZ2 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 1044.8 ms