Protein–RNA interactions for Protein: Q8N9Z2

CCDC71L, Coiled-coil domain-containing protein 71L, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71LQ8N9Z2 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
CCDC71LQ8N9Z2 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC17.89■□□□□ 0.45
CCDC71LQ8N9Z2 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
CCDC71LQ8N9Z2 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
CCDC71LQ8N9Z2 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC17.89■□□□□ 0.45
CCDC71LQ8N9Z2 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
CCDC71LQ8N9Z2 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC71LQ8N9Z2 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC17.88■□□□□ 0.45
CCDC71LQ8N9Z2 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC71LQ8N9Z2 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC17.88■□□□□ 0.45
CCDC71LQ8N9Z2 MIR4508-201ENST00000584178 70 ntBASIC17.88■□□□□ 0.45
CCDC71LQ8N9Z2 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC71LQ8N9Z2 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC71LQ8N9Z2 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC71LQ8N9Z2 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC17.88■□□□□ 0.45
CCDC71LQ8N9Z2 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC71LQ8N9Z2 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC71LQ8N9Z2 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC71LQ8N9Z2 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC71LQ8N9Z2 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC17.87■□□□□ 0.45
CCDC71LQ8N9Z2 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC17.87■□□□□ 0.45
CCDC71LQ8N9Z2 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC71LQ8N9Z2 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC71LQ8N9Z2 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
CCDC71LQ8N9Z2 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
CCDC71LQ8N9Z2 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC71LQ8N9Z2 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC17.87■□□□□ 0.45
CCDC71LQ8N9Z2 ATP5G2P3-201ENST00000429083 425 ntBASIC17.87■□□□□ 0.45
CCDC71LQ8N9Z2 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC71LQ8N9Z2 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC71LQ8N9Z2 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC71LQ8N9Z2 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC71LQ8N9Z2 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC17.87■□□□□ 0.45
CCDC71LQ8N9Z2 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC17.87■□□□□ 0.45
CCDC71LQ8N9Z2 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC71LQ8N9Z2 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC71LQ8N9Z2 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC71LQ8N9Z2 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
CCDC71LQ8N9Z2 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC71LQ8N9Z2 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC71LQ8N9Z2 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC17.86■□□□□ 0.45
CCDC71LQ8N9Z2 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC17.86■□□□□ 0.45
CCDC71LQ8N9Z2 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
CCDC71LQ8N9Z2 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC71LQ8N9Z2 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC71LQ8N9Z2 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC17.86■□□□□ 0.45
CCDC71LQ8N9Z2 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC17.86■□□□□ 0.45
CCDC71LQ8N9Z2 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC71LQ8N9Z2 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CCDC71LQ8N9Z2 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC17.85■□□□□ 0.45
CCDC71LQ8N9Z2 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CCDC71LQ8N9Z2 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CCDC71LQ8N9Z2 SENP5-202ENST00000419026 973 ntTSL 3 BASIC17.85■□□□□ 0.45
CCDC71LQ8N9Z2 AC004987.1-201ENST00000428627 508 ntBASIC17.85■□□□□ 0.45
CCDC71LQ8N9Z2 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
CCDC71LQ8N9Z2 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
CCDC71LQ8N9Z2 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CCDC71LQ8N9Z2 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
CCDC71LQ8N9Z2 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CCDC71LQ8N9Z2 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
CCDC71LQ8N9Z2 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC17.85■□□□□ 0.45
CCDC71LQ8N9Z2 AC137630.3-201ENST00000607245 391 ntBASIC17.85■□□□□ 0.45
CCDC71LQ8N9Z2 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
CCDC71LQ8N9Z2 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC17.85■□□□□ 0.45
CCDC71LQ8N9Z2 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
CCDC71LQ8N9Z2 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
CCDC71LQ8N9Z2 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC17.84■□□□□ 0.45
CCDC71LQ8N9Z2 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC71LQ8N9Z2 FEM1AP4-201ENST00000443167 1987 ntBASIC17.84■□□□□ 0.45
CCDC71LQ8N9Z2 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC71LQ8N9Z2 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC17.84■□□□□ 0.45
CCDC71LQ8N9Z2 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC17.84■□□□□ 0.45
CCDC71LQ8N9Z2 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC71LQ8N9Z2 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC17.84■□□□□ 0.45
CCDC71LQ8N9Z2 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC71LQ8N9Z2 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC71LQ8N9Z2 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC71LQ8N9Z2 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC71LQ8N9Z2 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC71LQ8N9Z2 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CCDC71LQ8N9Z2 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
CCDC71LQ8N9Z2 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
CCDC71LQ8N9Z2 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
CCDC71LQ8N9Z2 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.45
CCDC71LQ8N9Z2 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC17.83■□□□□ 0.45
CCDC71LQ8N9Z2 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC17.83■□□□□ 0.45
CCDC71LQ8N9Z2 ME2-206ENST00000638410 2289 ntTSL 5 BASIC17.83■□□□□ 0.45
CCDC71LQ8N9Z2 ME2-210ENST00000639255 2262 ntTSL 5 BASIC17.83■□□□□ 0.45
CCDC71LQ8N9Z2 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
CCDC71LQ8N9Z2 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
CCDC71LQ8N9Z2 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
CCDC71LQ8N9Z2 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC17.83■□□□□ 0.45
CCDC71LQ8N9Z2 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC17.83■□□□□ 0.44
CCDC71LQ8N9Z2 AC104564.3-201ENST00000582367 638 ntBASIC17.83■□□□□ 0.44
CCDC71LQ8N9Z2 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CCDC71LQ8N9Z2 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CCDC71LQ8N9Z2 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CCDC71LQ8N9Z2 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CCDC71LQ8N9Z2 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CCDC71LQ8N9Z2 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC17.83■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms