Protein–RNA interactions for Protein: P08123

COL1A2, Collagen alpha-2(I) chain, humanhuman

Predictions only

Length 1,366 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2P08123 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC23.78■■□□□ 1.4
COL1A2P08123 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC23.78■■□□□ 1.4
COL1A2P08123 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC23.78■■□□□ 1.4
COL1A2P08123 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC23.78■■□□□ 1.4
COL1A2P08123 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
COL1A2P08123 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC23.77■■□□□ 1.4
COL1A2P08123 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC23.77■■□□□ 1.4
COL1A2P08123 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC23.77■■□□□ 1.4
COL1A2P08123 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
COL1A2P08123 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
COL1A2P08123 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
COL1A2P08123 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
COL1A2P08123 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC23.77■■□□□ 1.4
COL1A2P08123 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC23.77■■□□□ 1.4
COL1A2P08123 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC23.77■■□□□ 1.4
COL1A2P08123 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
COL1A2P08123 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC23.77■■□□□ 1.4
COL1A2P08123 SERP1-208ENST00000491660 830 ntTSL 2 BASIC23.77■■□□□ 1.4
COL1A2P08123 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC23.77■■□□□ 1.4
COL1A2P08123 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC23.77■■□□□ 1.4
COL1A2P08123 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC23.77■■□□□ 1.4
COL1A2P08123 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
COL1A2P08123 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC23.77■■□□□ 1.4
COL1A2P08123 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
COL1A2P08123 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC23.76■■□□□ 1.39
COL1A2P08123 ID1-201ENST00000376105 1233 ntBASIC23.76■■□□□ 1.39
COL1A2P08123 AC026185.1-201ENST00000445748 174 ntBASIC23.76■■□□□ 1.39
COL1A2P08123 AC138907.5-202ENST00000569484 235 ntBASIC23.76■■□□□ 1.39
COL1A2P08123 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
COL1A2P08123 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
COL1A2P08123 AP001160.3-201ENST00000601484 763 ntBASIC23.76■■□□□ 1.39
COL1A2P08123 AC011767.1-201ENST00000617410 1153 ntBASIC23.76■■□□□ 1.39
COL1A2P08123 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC23.76■■□□□ 1.39
COL1A2P08123 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC23.75■■□□□ 1.39
COL1A2P08123 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC23.75■■□□□ 1.39
COL1A2P08123 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC23.75■■□□□ 1.39
COL1A2P08123 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC23.75■■□□□ 1.39
COL1A2P08123 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
COL1A2P08123 AC010141.2-201ENST00000452426 721 ntBASIC23.75■■□□□ 1.39
COL1A2P08123 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC23.75■■□□□ 1.39
COL1A2P08123 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
COL1A2P08123 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC23.74■■□□□ 1.39
COL1A2P08123 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
COL1A2P08123 AC139530.1-201ENST00000575312 1977 ntBASIC23.74■■□□□ 1.39
COL1A2P08123 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC23.74■■□□□ 1.39
COL1A2P08123 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
COL1A2P08123 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC23.74■■□□□ 1.39
COL1A2P08123 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
COL1A2P08123 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
COL1A2P08123 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC23.74■■□□□ 1.39
COL1A2P08123 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC23.74■■□□□ 1.39
COL1A2P08123 MFSD11-216ENST00000590393 1141 ntBASIC23.74■■□□□ 1.39
COL1A2P08123 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
COL1A2P08123 TFG-210ENST00000620299 1289 ntTSL 5 BASIC23.74■■□□□ 1.39
COL1A2P08123 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC23.74■■□□□ 1.39
COL1A2P08123 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC23.74■■□□□ 1.39
COL1A2P08123 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
COL1A2P08123 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
COL1A2P08123 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC23.73■■□□□ 1.39
COL1A2P08123 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC23.73■■□□□ 1.39
COL1A2P08123 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC23.73■■□□□ 1.39
COL1A2P08123 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
COL1A2P08123 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
COL1A2P08123 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
COL1A2P08123 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC23.73■■□□□ 1.39
COL1A2P08123 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC23.73■■□□□ 1.39
COL1A2P08123 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC23.73■■□□□ 1.39
COL1A2P08123 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC23.73■■□□□ 1.39
COL1A2P08123 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC23.73■■□□□ 1.39
COL1A2P08123 EEF1DP3-203ENST00000566025 782 ntBASIC23.73■■□□□ 1.39
COL1A2P08123 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
COL1A2P08123 UBE2DNL-204ENST00000602536 740 ntBASIC23.73■■□□□ 1.39
COL1A2P08123 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC23.73■■□□□ 1.39
COL1A2P08123 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
COL1A2P08123 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
COL1A2P08123 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC23.72■■□□□ 1.39
COL1A2P08123 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC23.72■■□□□ 1.39
COL1A2P08123 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC23.72■■□□□ 1.39
COL1A2P08123 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC23.72■■□□□ 1.39
COL1A2P08123 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
COL1A2P08123 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC23.72■■□□□ 1.39
COL1A2P08123 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
COL1A2P08123 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC23.72■■□□□ 1.39
COL1A2P08123 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
COL1A2P08123 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
COL1A2P08123 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
COL1A2P08123 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
COL1A2P08123 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC23.71■■□□□ 1.39
COL1A2P08123 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC23.71■■□□□ 1.39
COL1A2P08123 COMT-203ENST00000403184 2217 ntTSL 2 BASIC23.71■■□□□ 1.39
COL1A2P08123 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
COL1A2P08123 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC23.71■■□□□ 1.39
COL1A2P08123 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC23.71■■□□□ 1.39
COL1A2P08123 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC23.71■■□□□ 1.39
COL1A2P08123 TK2-208ENST00000545043 1120 ntTSL 2 BASIC23.71■■□□□ 1.39
COL1A2P08123 KRT18P20-201ENST00000548986 1279 ntBASIC23.71■■□□□ 1.39
COL1A2P08123 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC23.71■■□□□ 1.39
COL1A2P08123 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC23.71■■□□□ 1.39
COL1A2P08123 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC23.71■■□□□ 1.39
COL1A2P08123 MDK-213ENST00000617138 635 ntTSL 2 BASIC23.71■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 61.2 ms