Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
CTSDP07339 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
CTSDP07339 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC17.87■□□□□ 0.45
CTSDP07339 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC17.87■□□□□ 0.45
CTSDP07339 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
CTSDP07339 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC17.87■□□□□ 0.45
CTSDP07339 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC17.86■□□□□ 0.45
CTSDP07339 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC17.86■□□□□ 0.45
CTSDP07339 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC17.86■□□□□ 0.45
CTSDP07339 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CTSDP07339 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CTSDP07339 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC17.86■□□□□ 0.45
CTSDP07339 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC17.86■□□□□ 0.45
CTSDP07339 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC17.86■□□□□ 0.45
CTSDP07339 MIR4508-201ENST00000584178 70 ntBASIC17.86■□□□□ 0.45
CTSDP07339 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CTSDP07339 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC17.86■□□□□ 0.45
CTSDP07339 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC17.86■□□□□ 0.45
CTSDP07339 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CTSDP07339 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC17.86■□□□□ 0.45
CTSDP07339 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CTSDP07339 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CTSDP07339 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC17.86■□□□□ 0.45
CTSDP07339 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
CTSDP07339 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CTSDP07339 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CTSDP07339 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CTSDP07339 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CTSDP07339 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
CTSDP07339 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC17.85■□□□□ 0.45
CTSDP07339 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CTSDP07339 AC104564.3-201ENST00000582367 638 ntBASIC17.85■□□□□ 0.45
CTSDP07339 AC137630.3-201ENST00000607245 391 ntBASIC17.85■□□□□ 0.45
CTSDP07339 NKILA-201ENST00000613231 537 ntTSL 4 BASIC17.85■□□□□ 0.45
CTSDP07339 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC17.85■□□□□ 0.45
CTSDP07339 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC17.85■□□□□ 0.45
CTSDP07339 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC17.85■□□□□ 0.45
CTSDP07339 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC17.85■□□□□ 0.45
CTSDP07339 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC17.85■□□□□ 0.45
CTSDP07339 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CTSDP07339 AL121603.2-201ENST00000557373 2117 ntBASIC17.84■□□□□ 0.45
CTSDP07339 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CTSDP07339 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CTSDP07339 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
CTSDP07339 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC17.84■□□□□ 0.45
CTSDP07339 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CTSDP07339 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CTSDP07339 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CTSDP07339 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC17.84■□□□□ 0.45
CTSDP07339 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC17.84■□□□□ 0.45
CTSDP07339 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
CTSDP07339 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC17.84■□□□□ 0.45
CTSDP07339 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC17.84■□□□□ 0.45
CTSDP07339 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
CTSDP07339 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CTSDP07339 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
CTSDP07339 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC17.83■□□□□ 0.45
CTSDP07339 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
CTSDP07339 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CTSDP07339 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC17.83■□□□□ 0.44
CTSDP07339 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC17.83■□□□□ 0.44
CTSDP07339 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC17.83■□□□□ 0.44
CTSDP07339 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC17.83■□□□□ 0.44
CTSDP07339 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC17.83■□□□□ 0.44
CTSDP07339 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
CTSDP07339 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
CTSDP07339 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
CTSDP07339 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CTSDP07339 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CTSDP07339 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CTSDP07339 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
CTSDP07339 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
CTSDP07339 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC17.82■□□□□ 0.44
CTSDP07339 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CTSDP07339 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC17.82■□□□□ 0.44
CTSDP07339 CLTA-210ENST00000540080 989 ntTSL 2 BASIC17.82■□□□□ 0.44
CTSDP07339 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CTSDP07339 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CTSDP07339 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CTSDP07339 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CTSDP07339 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC17.82■□□□□ 0.44
CTSDP07339 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CTSDP07339 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CTSDP07339 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
CTSDP07339 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
CTSDP07339 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CTSDP07339 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CTSDP07339 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CTSDP07339 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC17.81■□□□□ 0.44
CTSDP07339 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CTSDP07339 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC17.81■□□□□ 0.44
CTSDP07339 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CTSDP07339 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC17.81■□□□□ 0.44
CTSDP07339 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
CTSDP07339 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CTSDP07339 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
CTSDP07339 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CTSDP07339 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CTSDP07339 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
CTSDP07339 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 99 ms