Protein–RNA interactions for Protein: Q9Y5I0

PCDHA13, Protocadherin alpha-13, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13Q9Y5I0 GTSE1-AS1-202ENST00000623117 1518 ntBASIC23.09■■□□□ 1.29
PCDHA13Q9Y5I0 AL031602.1-201ENST00000633169 911 ntBASIC23.09■■□□□ 1.29
PCDHA13Q9Y5I0 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
PCDHA13Q9Y5I0 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC23.09■■□□□ 1.29
PCDHA13Q9Y5I0 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
PCDHA13Q9Y5I0 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC23.09■■□□□ 1.29
PCDHA13Q9Y5I0 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC23.09■■□□□ 1.29
PCDHA13Q9Y5I0 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
PCDHA13Q9Y5I0 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC23.08■■□□□ 1.29
PCDHA13Q9Y5I0 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC23.08■■□□□ 1.29
PCDHA13Q9Y5I0 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC23.08■■□□□ 1.29
PCDHA13Q9Y5I0 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
PCDHA13Q9Y5I0 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
PCDHA13Q9Y5I0 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC23.08■■□□□ 1.29
PCDHA13Q9Y5I0 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
PCDHA13Q9Y5I0 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
PCDHA13Q9Y5I0 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC23.08■■□□□ 1.29
PCDHA13Q9Y5I0 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
PCDHA13Q9Y5I0 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC23.08■■□□□ 1.28
PCDHA13Q9Y5I0 AC026471.6-201ENST00000622954 1905 ntBASIC23.08■■□□□ 1.28
PCDHA13Q9Y5I0 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.28
PCDHA13Q9Y5I0 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
PCDHA13Q9Y5I0 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC23.08■■□□□ 1.28
PCDHA13Q9Y5I0 FEM1AP4-201ENST00000443167 1987 ntBASIC23.07■■□□□ 1.28
PCDHA13Q9Y5I0 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
PCDHA13Q9Y5I0 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC23.07■■□□□ 1.28
PCDHA13Q9Y5I0 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
PCDHA13Q9Y5I0 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC23.07■■□□□ 1.28
PCDHA13Q9Y5I0 AC079089.2-201ENST00000531211 1277 ntBASIC23.07■■□□□ 1.28
PCDHA13Q9Y5I0 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC23.07■■□□□ 1.28
PCDHA13Q9Y5I0 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
PCDHA13Q9Y5I0 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
PCDHA13Q9Y5I0 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
PCDHA13Q9Y5I0 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
PCDHA13Q9Y5I0 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC23.07■■□□□ 1.28
PCDHA13Q9Y5I0 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
PCDHA13Q9Y5I0 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
PCDHA13Q9Y5I0 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
PCDHA13Q9Y5I0 AF106564.1-201ENST00000607058 2553 ntBASIC23.06■■□□□ 1.28
PCDHA13Q9Y5I0 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC23.06■■□□□ 1.28
PCDHA13Q9Y5I0 INPP1-201ENST00000322522 1919 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
PCDHA13Q9Y5I0 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC23.06■■□□□ 1.28
PCDHA13Q9Y5I0 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC23.06■■□□□ 1.28
PCDHA13Q9Y5I0 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC23.06■■□□□ 1.28
PCDHA13Q9Y5I0 AL117332.1-201ENST00000622628 974 ntBASIC23.06■■□□□ 1.28
PCDHA13Q9Y5I0 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
PCDHA13Q9Y5I0 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC23.06■■□□□ 1.28
PCDHA13Q9Y5I0 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC23.06■■□□□ 1.28
PCDHA13Q9Y5I0 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC23.05■■□□□ 1.28
PCDHA13Q9Y5I0 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
PCDHA13Q9Y5I0 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC23.05■■□□□ 1.28
PCDHA13Q9Y5I0 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC23.05■■□□□ 1.28
PCDHA13Q9Y5I0 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
PCDHA13Q9Y5I0 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC23.05■■□□□ 1.28
PCDHA13Q9Y5I0 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC23.05■■□□□ 1.28
PCDHA13Q9Y5I0 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
PCDHA13Q9Y5I0 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC23.05■■□□□ 1.28
PCDHA13Q9Y5I0 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
PCDHA13Q9Y5I0 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC23.05■■□□□ 1.28
PCDHA13Q9Y5I0 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
PCDHA13Q9Y5I0 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
PCDHA13Q9Y5I0 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
PCDHA13Q9Y5I0 USP45-205ENST00000472914 1617 ntTSL 5 BASIC23.04■■□□□ 1.28
PCDHA13Q9Y5I0 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC23.04■■□□□ 1.28
PCDHA13Q9Y5I0 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC23.04■■□□□ 1.28
PCDHA13Q9Y5I0 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
PCDHA13Q9Y5I0 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
PCDHA13Q9Y5I0 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
PCDHA13Q9Y5I0 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
PCDHA13Q9Y5I0 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC23.04■■□□□ 1.28
PCDHA13Q9Y5I0 AL451085.2-201ENST00000605085 799 ntBASIC23.04■■□□□ 1.28
PCDHA13Q9Y5I0 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
PCDHA13Q9Y5I0 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
PCDHA13Q9Y5I0 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC23.04■■□□□ 1.28
PCDHA13Q9Y5I0 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
PCDHA13Q9Y5I0 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
PCDHA13Q9Y5I0 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC23.03■■□□□ 1.28
PCDHA13Q9Y5I0 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC23.03■■□□□ 1.28
PCDHA13Q9Y5I0 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
PCDHA13Q9Y5I0 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC23.03■■□□□ 1.28
PCDHA13Q9Y5I0 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC23.03■■□□□ 1.28
PCDHA13Q9Y5I0 AC241377.3-202ENST00000626088 1088 ntBASIC23.03■■□□□ 1.28
PCDHA13Q9Y5I0 AC241585.3-202ENST00000628937 1088 ntBASIC23.03■■□□□ 1.28
PCDHA13Q9Y5I0 AC245100.8-202ENST00000629247 1058 ntBASIC23.03■■□□□ 1.28
PCDHA13Q9Y5I0 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC23.03■■□□□ 1.28
PCDHA13Q9Y5I0 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
PCDHA13Q9Y5I0 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
PCDHA13Q9Y5I0 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
PCDHA13Q9Y5I0 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
PCDHA13Q9Y5I0 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC23.03■■□□□ 1.28
PCDHA13Q9Y5I0 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
PCDHA13Q9Y5I0 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
PCDHA13Q9Y5I0 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
PCDHA13Q9Y5I0 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC23.03■■□□□ 1.28
PCDHA13Q9Y5I0 AC133637.1-201ENST00000624115 1537 ntBASIC23.03■■□□□ 1.28
PCDHA13Q9Y5I0 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
PCDHA13Q9Y5I0 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC23.02■■□□□ 1.28
PCDHA13Q9Y5I0 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
PCDHA13Q9Y5I0 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
PCDHA13Q9Y5I0 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC23.02■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 127 ms