Protein–RNA interactions for Protein: Q9HBT6

CDH20, Cadherin-20, humanhuman

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20Q9HBT6 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
CDH20Q9HBT6 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC18.83■□□□□ 0.61
CDH20Q9HBT6 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
CDH20Q9HBT6 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
CDH20Q9HBT6 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CDH20Q9HBT6 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC18.83■□□□□ 0.61
CDH20Q9HBT6 AC019069.1-201ENST00000610008 1333 ntBASIC18.83■□□□□ 0.61
CDH20Q9HBT6 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
CDH20Q9HBT6 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
CDH20Q9HBT6 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CDH20Q9HBT6 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC18.83■□□□□ 0.6
CDH20Q9HBT6 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CDH20Q9HBT6 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CDH20Q9HBT6 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CDH20Q9HBT6 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC18.83■□□□□ 0.6
CDH20Q9HBT6 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CDH20Q9HBT6 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC18.83■□□□□ 0.6
CDH20Q9HBT6 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC18.83■□□□□ 0.6
CDH20Q9HBT6 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC18.83■□□□□ 0.6
CDH20Q9HBT6 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
CDH20Q9HBT6 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
CDH20Q9HBT6 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CDH20Q9HBT6 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
CDH20Q9HBT6 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CDH20Q9HBT6 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC18.83■□□□□ 0.6
CDH20Q9HBT6 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CDH20Q9HBT6 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC18.82■□□□□ 0.6
CDH20Q9HBT6 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC18.82■□□□□ 0.6
CDH20Q9HBT6 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC18.82■□□□□ 0.6
CDH20Q9HBT6 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC18.82■□□□□ 0.6
CDH20Q9HBT6 LHPP-203ENST00000392757 840 ntTSL 3 BASIC18.82■□□□□ 0.6
CDH20Q9HBT6 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC18.82■□□□□ 0.6
CDH20Q9HBT6 AC138028.2-201ENST00000440406 1539 ntTSL 2 BASIC18.82■□□□□ 0.6
CDH20Q9HBT6 AC127496.7-201ENST00000625110 1798 ntBASIC18.82■□□□□ 0.6
CDH20Q9HBT6 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
CDH20Q9HBT6 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CDH20Q9HBT6 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC18.81■□□□□ 0.6
CDH20Q9HBT6 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CDH20Q9HBT6 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC18.81■□□□□ 0.6
CDH20Q9HBT6 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CDH20Q9HBT6 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CDH20Q9HBT6 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
CDH20Q9HBT6 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CDH20Q9HBT6 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC18.81■□□□□ 0.6
CDH20Q9HBT6 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CDH20Q9HBT6 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC18.81■□□□□ 0.6
CDH20Q9HBT6 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CDH20Q9HBT6 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CDH20Q9HBT6 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC18.81■□□□□ 0.6
CDH20Q9HBT6 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CDH20Q9HBT6 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CDH20Q9HBT6 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CDH20Q9HBT6 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CDH20Q9HBT6 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CDH20Q9HBT6 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CDH20Q9HBT6 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CDH20Q9HBT6 AC233723.2-201ENST00000623798 2106 ntBASIC18.8■□□□□ 0.6
CDH20Q9HBT6 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CDH20Q9HBT6 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC18.8■□□□□ 0.6
CDH20Q9HBT6 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CDH20Q9HBT6 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CDH20Q9HBT6 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CDH20Q9HBT6 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CDH20Q9HBT6 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CDH20Q9HBT6 IRS3P-201ENST00000223076 1006 ntBASIC18.8■□□□□ 0.6
CDH20Q9HBT6 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CDH20Q9HBT6 MIR572-201ENST00000384983 95 ntBASIC18.8■□□□□ 0.6
CDH20Q9HBT6 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC18.8■□□□□ 0.6
CDH20Q9HBT6 RHOF-204ENST00000537265 699 ntTSL 2 BASIC18.8■□□□□ 0.6
CDH20Q9HBT6 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CDH20Q9HBT6 AC105233.4-201ENST00000642045 216 ntBASIC18.8■□□□□ 0.6
CDH20Q9HBT6 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CDH20Q9HBT6 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CDH20Q9HBT6 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CDH20Q9HBT6 OR7E47P-201ENST00000546390 1422 ntBASIC18.8■□□□□ 0.6
CDH20Q9HBT6 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CDH20Q9HBT6 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC18.8■□□□□ 0.6
CDH20Q9HBT6 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CDH20Q9HBT6 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CDH20Q9HBT6 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC18.8■□□□□ 0.6
CDH20Q9HBT6 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC18.79■□□□□ 0.6
CDH20Q9HBT6 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CDH20Q9HBT6 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
CDH20Q9HBT6 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CDH20Q9HBT6 PRODH-203ENST00000357068 2462 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
CDH20Q9HBT6 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CDH20Q9HBT6 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CDH20Q9HBT6 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CDH20Q9HBT6 AC137767.1-201ENST00000602918 1920 ntBASIC18.79■□□□□ 0.6
CDH20Q9HBT6 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC18.79■□□□□ 0.6
CDH20Q9HBT6 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC18.79■□□□□ 0.6
CDH20Q9HBT6 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CDH20Q9HBT6 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC18.79■□□□□ 0.6
CDH20Q9HBT6 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CDH20Q9HBT6 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CDH20Q9HBT6 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CDH20Q9HBT6 SIMC1-202ENST00000341199 2056 ntAPPRIS P3 TSL 2 BASIC18.78■□□□□ 0.6
CDH20Q9HBT6 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
CDH20Q9HBT6 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CDH20Q9HBT6 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 82.7 ms