Protein–RNA interactions for Protein: Q9BSR8

YIPF4, Protein YIPF4, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF4Q9BSR8 USP45-205ENST00000472914 1617 ntTSL 5 BASIC20.3■□□□□ 0.84
YIPF4Q9BSR8 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
YIPF4Q9BSR8 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
YIPF4Q9BSR8 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC20.3■□□□□ 0.84
YIPF4Q9BSR8 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC20.3■□□□□ 0.84
YIPF4Q9BSR8 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
YIPF4Q9BSR8 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC20.29■□□□□ 0.84
YIPF4Q9BSR8 FBXW4P1-201ENST00000426721 2239 ntBASIC20.29■□□□□ 0.84
YIPF4Q9BSR8 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
YIPF4Q9BSR8 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
YIPF4Q9BSR8 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
YIPF4Q9BSR8 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
YIPF4Q9BSR8 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC20.29■□□□□ 0.84
YIPF4Q9BSR8 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
YIPF4Q9BSR8 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
YIPF4Q9BSR8 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC20.28■□□□□ 0.84
YIPF4Q9BSR8 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
YIPF4Q9BSR8 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC20.28■□□□□ 0.84
YIPF4Q9BSR8 OR2I1P-207ENST00000453522 948 ntBASIC20.28■□□□□ 0.84
YIPF4Q9BSR8 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC20.28■□□□□ 0.84
YIPF4Q9BSR8 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
YIPF4Q9BSR8 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
YIPF4Q9BSR8 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC20.28■□□□□ 0.84
YIPF4Q9BSR8 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC20.28■□□□□ 0.84
YIPF4Q9BSR8 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC20.28■□□□□ 0.84
YIPF4Q9BSR8 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC20.28■□□□□ 0.84
YIPF4Q9BSR8 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
YIPF4Q9BSR8 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
YIPF4Q9BSR8 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC20.28■□□□□ 0.84
YIPF4Q9BSR8 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
YIPF4Q9BSR8 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
YIPF4Q9BSR8 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
YIPF4Q9BSR8 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC20.27■□□□□ 0.84
YIPF4Q9BSR8 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
YIPF4Q9BSR8 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
YIPF4Q9BSR8 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
YIPF4Q9BSR8 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
YIPF4Q9BSR8 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
YIPF4Q9BSR8 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
YIPF4Q9BSR8 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC20.27■□□□□ 0.84
YIPF4Q9BSR8 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC20.27■□□□□ 0.84
YIPF4Q9BSR8 RBM38-205ENST00000440234 686 ntTSL 2 BASIC20.27■□□□□ 0.84
YIPF4Q9BSR8 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
YIPF4Q9BSR8 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC20.27■□□□□ 0.84
YIPF4Q9BSR8 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC20.27■□□□□ 0.84
YIPF4Q9BSR8 AL138724.1-201ENST00000606771 1088 ntBASIC20.27■□□□□ 0.84
YIPF4Q9BSR8 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
YIPF4Q9BSR8 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
YIPF4Q9BSR8 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
YIPF4Q9BSR8 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
YIPF4Q9BSR8 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
YIPF4Q9BSR8 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
YIPF4Q9BSR8 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
YIPF4Q9BSR8 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC20.26■□□□□ 0.83
YIPF4Q9BSR8 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
YIPF4Q9BSR8 UNC93B3-201ENST00000308076 687 ntBASIC20.26■□□□□ 0.83
YIPF4Q9BSR8 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
YIPF4Q9BSR8 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
YIPF4Q9BSR8 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
YIPF4Q9BSR8 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
YIPF4Q9BSR8 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
YIPF4Q9BSR8 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
YIPF4Q9BSR8 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC20.26■□□□□ 0.83
YIPF4Q9BSR8 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
YIPF4Q9BSR8 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
YIPF4Q9BSR8 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
YIPF4Q9BSR8 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC20.25■□□□□ 0.83
YIPF4Q9BSR8 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
YIPF4Q9BSR8 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
YIPF4Q9BSR8 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
YIPF4Q9BSR8 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC20.25■□□□□ 0.83
YIPF4Q9BSR8 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC20.25■□□□□ 0.83
YIPF4Q9BSR8 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
YIPF4Q9BSR8 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
YIPF4Q9BSR8 AC133561.4-201ENST00000566112 224 ntBASIC20.25■□□□□ 0.83
YIPF4Q9BSR8 AC136469.2-201ENST00000623944 1028 ntBASIC20.25■□□□□ 0.83
YIPF4Q9BSR8 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC20.25■□□□□ 0.83
YIPF4Q9BSR8 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
YIPF4Q9BSR8 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
YIPF4Q9BSR8 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
YIPF4Q9BSR8 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC20.25■□□□□ 0.83
YIPF4Q9BSR8 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
YIPF4Q9BSR8 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC20.25■□□□□ 0.83
YIPF4Q9BSR8 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
YIPF4Q9BSR8 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC20.24■□□□□ 0.83
YIPF4Q9BSR8 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
YIPF4Q9BSR8 PTMA-205ENST00000410064 814 ntTSL 2 BASIC20.24■□□□□ 0.83
YIPF4Q9BSR8 SLC47A1P1-202ENST00000449666 945 ntBASIC20.24■□□□□ 0.83
YIPF4Q9BSR8 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC20.24■□□□□ 0.83
YIPF4Q9BSR8 AC011298.3-201ENST00000615796 283 ntBASIC20.24■□□□□ 0.83
YIPF4Q9BSR8 SF1-220ENST00000626028 704 ntTSL 2 BASIC20.24■□□□□ 0.83
YIPF4Q9BSR8 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
YIPF4Q9BSR8 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
YIPF4Q9BSR8 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
YIPF4Q9BSR8 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
YIPF4Q9BSR8 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
YIPF4Q9BSR8 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
YIPF4Q9BSR8 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
YIPF4Q9BSR8 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
YIPF4Q9BSR8 PBX2P1-201ENST00000493219 1291 ntBASIC20.23■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 53.8 ms