Protein–RNA interactions for Protein: Q96I24

FUBP3, Far upstream element-binding protein 3, humanhuman

Known RBP eCLIP

Length 572 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FUBP3Q96I24 CREBZF-202ENST00000490820 4329 ntTSL 1 (best)13.52□□□□□ -0.242e-6■□□□□ 10.4
FUBP3Q96I24 CREBZF-204ENST00000527447 4037 ntAPPRIS P1 BASIC13.38□□□□□ -0.272e-6■□□□□ 10.4
FUBP3Q96I24 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC6.04□□□□□ -1.442e-6■□□□□ 10.4
FUBP3Q96I24 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.022e-7■□□□□ 10.4
FUBP3Q96I24 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC22.9■■□□□ 1.262e-25■□□□□ 10.4
FUBP3Q96I24 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC4.48□□□□□ -1.692e-25■□□□□ 10.4
FUBP3Q96I24 TCF7L2-211ENST00000466338 1026 ntTSL 211.02□□□□□ -0.657e-7■□□□□ 10.3
FUBP3Q96I24 TCF7L2-221ENST00000545257 2160 ntTSL 1 (best) BASIC8.83□□□□□ -17e-7■□□□□ 10.3
FUBP3Q96I24 TCF7L2-207ENST00000369386 1274 ntTSL 57.5□□□□□ -1.217e-7■□□□□ 10.3
FUBP3Q96I24 SERINC5-204ENST00000512972 1627 ntTSL 224.8■■□□□ 1.565e-6■□□□□ 10.3
FUBP3Q96I24 SERINC5-206ENST00000632581 1573 ntTSL 224.75■■□□□ 1.555e-6■□□□□ 10.3
FUBP3Q96I24 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC24.59■■□□□ 1.535e-6■□□□□ 10.3
FUBP3Q96I24 SERINC5-202ENST00000507668 6479 ntAPPRIS P1 TSL 2 BASIC11.02□□□□□ -0.655e-6■□□□□ 10.3
FUBP3Q96I24 FAM171A1-201ENST00000378116 3952 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.91e-12■□□□□ 10.3
FUBP3Q96I24 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.583e-6■□□□□ 10.3
FUBP3Q96I24 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.143e-6■□□□□ 10.3
FUBP3Q96I24 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC21.31■■□□□ 15e-8■□□□□ 10.3
FUBP3Q96I24 BUB3-202ENST00000368859 667 ntTSL 3 BASIC20.07■□□□□ 0.83e-6■□□□□ 10.3
FUBP3Q96I24 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.583e-6■□□□□ 10.3
FUBP3Q96I24 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC17.45■□□□□ 0.383e-6■□□□□ 10.3
FUBP3Q96I24 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC17.18■□□□□ 0.343e-6■□□□□ 10.3
FUBP3Q96I24 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC16.25■□□□□ 0.193e-6■□□□□ 10.3
FUBP3Q96I24 MIER1-202ENST00000355977 3595 ntTSL 5 BASIC13.97□□□□□ -0.173e-6■□□□□ 10.3
FUBP3Q96I24 USP6NL-205ENST00000609104 11377 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.393e-6■□□□□ 10.3
FUBP3Q96I24 NEK6-213ENST00000540326 2578 ntTSL 1 (best) BASIC12.33□□□□□ -0.433e-6■□□□□ 10.3
FUBP3Q96I24 MIER1-207ENST00000371018 3875 ntTSL 1 (best) BASIC12.09□□□□□ -0.473e-6■□□□□ 10.3
FUBP3Q96I24 NEK6-205ENST00000394199 2535 ntTSL 2 BASIC11.84□□□□□ -0.513e-6■□□□□ 10.3
FUBP3Q96I24 MIER1-203ENST00000357692 4978 ntTSL 1 (best) BASIC11.79□□□□□ -0.523e-6■□□□□ 10.3
FUBP3Q96I24 NEK6-203ENST00000373600 3619 ntTSL 1 (best) BASIC11.61□□□□□ -0.553e-6■□□□□ 10.3
FUBP3Q96I24 NEK6-212ENST00000539416 2582 ntTSL 2 BASIC11.46□□□□□ -0.573e-6■□□□□ 10.3
FUBP3Q96I24 SS18-213ENST00000579640 1840 ntTSL 211.38□□□□□ -0.593e-6■□□□□ 10.3
FUBP3Q96I24 PPAT-201ENST00000264220 3682 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.595e-8■□□□□ 10.3
FUBP3Q96I24 USP6NL-201ENST00000277575 4512 ntAPPRIS P3 TSL 5 BASIC11.32□□□□□ -0.63e-6■□□□□ 10.3
FUBP3Q96I24 NEK6-201ENST00000320246 3447 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.643e-6■□□□□ 10.3
FUBP3Q96I24 USP6NL-202ENST00000379237 4546 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.773e-6■□□□□ 10.3
FUBP3Q96I24 SS18-205ENST00000542420 2321 ntTSL 2 BASIC10.11□□□□□ -0.793e-6■□□□□ 10.3
FUBP3Q96I24 SS18-203ENST00000415083 3414 ntAPPRIS P3 TSL 1 (best) BASIC9.72□□□□□ -0.853e-6■□□□□ 10.3
FUBP3Q96I24 NEK6-215ENST00000546191 2580 ntAPPRIS P1 TSL 5 BASIC9.5□□□□□ -0.893e-6■□□□□ 10.3
FUBP3Q96I24 NEK6-204ENST00000373603 3447 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.973e-6■□□□□ 10.3
FUBP3Q96I24 MIER1-201ENST00000355356 4818 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -13e-6■□□□□ 10.3
FUBP3Q96I24 BUB3-203ENST00000368865 7828 ntAPPRIS P3 TSL 1 (best) BASIC7.96□□□□□ -1.133e-6■□□□□ 10.3
FUBP3Q96I24 SMC1A-201ENST00000322213 9784 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.344e-9■□□□□ 10.3
FUBP3Q96I24 SMC1A-202ENST00000375340 9930 ntTSL 1 (best) BASIC6.33□□□□□ -1.44e-9■□□□□ 10.3
FUBP3Q96I24 PPAT-202ENST00000425339 4043 ntTSL 1 (best)5.59□□□□□ -1.515e-8■□□□□ 10.3
FUBP3Q96I24 ITFG1-203ENST00000542691 1464 ntTSL 25.19□□□□□ -1.583e-6■□□□□ 10.3
FUBP3Q96I24 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.685e-8■□□□□ 10.3
FUBP3Q96I24 USP34-203ENST00000436269 1827 ntTSL 54.29□□□□□ -1.725e-8■□□□□ 10.3
FUBP3Q96I24 USP34-202ENST00000411912 4309 ntTSL 54.08□□□□□ -1.765e-8■□□□□ 10.3
FUBP3Q96I24 NEAT1_3.1-201ENST00000613347 159 ntBASIC11.93□□□□□ -0.53e-42■□□□□ 10.2
FUBP3Q96I24 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC21.08■□□□□ 0.971e-6■□□□□ 10.2
FUBP3Q96I24 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC19.69■□□□□ 0.741e-6■□□□□ 10.2
FUBP3Q96I24 STOM-202ENST00000347359 870 ntTSL 2 BASIC17.8■□□□□ 0.448e-19■□□□□ 10.2
FUBP3Q96I24 STOM-203ENST00000538954 1257 ntTSL 5 BASIC17.01■□□□□ 0.318e-19■□□□□ 10.2
FUBP3Q96I24 HSDL1-201ENST00000219439 3519 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.041e-6■□□□□ 10.2
FUBP3Q96I24 NAPB-202ENST00000398425 3824 ntTSL 1 (best) BASIC13□□□□□ -0.331e-6■□□□□ 10.2
FUBP3Q96I24 NAPB-201ENST00000377026 3837 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.341e-6■□□□□ 10.2
FUBP3Q96I24 NAPB-203ENST00000432543 3754 ntTSL 2 BASIC12.4□□□□□ -0.431e-6■□□□□ 10.2
FUBP3Q96I24 NAPB-207ENST00000617876 3883 ntAPPRIS ALT1 TSL 2 BASIC12.26□□□□□ -0.451e-6■□□□□ 10.2
FUBP3Q96I24 ARPP19-206ENST00000564163 718 ntTSL 2 BASIC12.16□□□□□ -0.461e-6■□□□□ 10.2
FUBP3Q96I24 IRS1-201ENST00000305123 9705 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.481e-6■□□□□ 10.2
FUBP3Q96I24 SCML1-204ENST00000398080 2704 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.491e-6■□□□□ 10.2
FUBP3Q96I24 SCML1-202ENST00000380043 2830 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.681e-6■□□□□ 10.2
FUBP3Q96I24 ARPP19-212ENST00000569281 661 ntAPPRIS P1 TSL 4 BASIC10.37□□□□□ -0.751e-6■□□□□ 10.2
FUBP3Q96I24 ARPP19-213ENST00000569723 550 ntTSL 4 BASIC9.23□□□□□ -0.931e-6■□□□□ 10.2
FUBP3Q96I24 ARPP19-209ENST00000567669 745 ntAPPRIS P1 TSL 2 BASIC9.13□□□□□ -0.951e-6■□□□□ 10.2
FUBP3Q96I24 HSDL1-208ENST00000619773 3059 nt7.99□□□□□ -1.131e-6■□□□□ 10.2
FUBP3Q96I24 STOM-201ENST00000286713 3010 ntAPPRIS P1 TSL 1 (best) BASIC7.77□□□□□ -1.178e-19■□□□□ 10.2
FUBP3Q96I24 SCML1-203ENST00000380045 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC7.47□□□□□ -1.211e-6■□□□□ 10.2
FUBP3Q96I24 ARPP19-205ENST00000563566 568 ntTSL 4 BASIC5.81□□□□□ -1.481e-6■□□□□ 10.2
FUBP3Q96I24 SCML1-207ENST00000487842 4615 ntTSL 1 (best)5.4□□□□□ -1.541e-6■□□□□ 10.2
FUBP3Q96I24 INSIG2-207ENST00000488995 518 ntTSL 34.81□□□□□ -1.641e-6■□□□□ 10.2
FUBP3Q96I24 INSIG2-205ENST00000479999 532 ntTSL 24.19□□□□□ -1.741e-6■□□□□ 10.2
FUBP3Q96I24 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.52□□□□□ -2.011e-6■□□□□ 10.2
FUBP3Q96I24 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.413e-6■□□□□ 10.2
FUBP3Q96I24 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.445e-7■□□□□ 10.2
FUBP3Q96I24 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC17.28■□□□□ 0.365e-7■□□□□ 10.2
FUBP3Q96I24 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.335e-7■□□□□ 10.2
FUBP3Q96I24 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.886e-7■□□□□ 10.2
FUBP3Q96I24 ABCD3-202ENST00000370214 3538 ntAPPRIS P1 TSL 1 (best) BASIC7.14□□□□□ -1.271e-6■□□□□ 10.2
FUBP3Q96I24 ABCD3-203ENST00000464165 3174 ntTSL 25.52□□□□□ -1.531e-6■□□□□ 10.2
FUBP3Q96I24 ABCD3-205ENST00000484213 4367 ntTSL 1 (best)4.49□□□□□ -1.691e-6■□□□□ 10.2
FUBP3Q96I24 FOXN3-202ENST00000345097 7832 ntAPPRIS ALT1 TSL 1 (best) BASIC8.89□□□□□ -0.998e-7■□□□□ 10.2
FUBP3Q96I24 FOXN3-217ENST00000557572 513 ntTSL 34.16□□□□□ -1.748e-7■□□□□ 10.2
FUBP3Q96I24 KIF1B-212ENST00000622724 8588 ntTSL 1 (best) BASIC9.91□□□□□ -0.822e-6■□□□□ 10.1
FUBP3Q96I24 KIF1B-211ENST00000620295 8624 ntTSL 1 (best) BASIC8.36□□□□□ -1.072e-6■□□□□ 10.1
FUBP3Q96I24 KIF1B-202ENST00000377081 8746 ntTSL 1 (best) BASIC8.26□□□□□ -1.092e-6■□□□□ 10.1
FUBP3Q96I24 KIF1B-204ENST00000377086 10669 ntTSL 1 (best) BASIC6.12□□□□□ -1.432e-6■□□□□ 10.1
FUBP3Q96I24 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.041e-7■□□□□ 10.1
FUBP3Q96I24 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC24.61■■□□□ 1.533e-8■□□□□ 10.1
FUBP3Q96I24 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.683e-8■□□□□ 10.1
FUBP3Q96I24 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC18.79■□□□□ 0.63e-8■□□□□ 10.1
FUBP3Q96I24 SEPT2-211ENST00000421717 818 ntTSL 418.69■□□□□ 0.583e-8■□□□□ 10.1
FUBP3Q96I24 SEPT2-223ENST00000451310 801 ntTSL 218.29■□□□□ 0.523e-8■□□□□ 10.1
FUBP3Q96I24 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC17.01■□□□□ 0.313e-8■□□□□ 10.1
FUBP3Q96I24 SEPT2-204ENST00000391973 3701 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.523e-8■□□□□ 10.1
FUBP3Q96I24 SEPT2-201ENST00000360051 3613 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.583e-8■□□□□ 10.1
FUBP3Q96I24 SEPT2-206ENST00000402092 3333 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.93e-8■□□□□ 10.1
FUBP3Q96I24 CP-210ENST00000481169 3411 ntTSL 26.79□□□□□ -1.323e-8■□□□□ 10.1
FUBP3Q96I24 SLC30A6-201ENST00000282587 5089 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.353e-8■□□□□ 10.1
FUBP3Q96I24 CP-212ENST00000490639 3105 ntTSL 1 (best)5.73□□□□□ -1.493e-8■□□□□ 10.1
Retrieved 100 of 4,568 protein–RNA pairs in 192.3 ms