RNA–Protein interactions for RNA: ENST00000464165.1

ABCD3-203, Transcript of ATP binding cassette subfamily D member 3, humanhuman

TSL 2

Gene ABCD3, Length 3,174 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3-203ENST00000464165 AEBP2Q6ZN18 517 aaPredicted RBP16.98■□□□□ 0.31
ABCD3-203ENST00000464165 CHIC1Q5VXU3 224 aa16.78■□□□□ 0.28
ABCD3-203ENST00000464165 PHF23Q9BUL5 403 aaPredicted RBP15□□□□□ -0.01
ABCD3-203ENST00000464165 SENP3Q9H4L4 574 aaPredicted RBP14.06□□□□□ -0.16
ABCD3-203ENST00000464165 PLPPR3Q6T4P5 718 aa13.81□□□□□ -0.2
ABCD3-203ENST00000464165 ADRA2BP18089 450 aa13.32□□□□□ -0.28
ABCD3-203ENST00000464165 PPP6R1Q9UPN7 881 aa13.23□□□□□ -0.29
ABCD3-203ENST00000464165 FOXD1Q16676 465 aa13.2□□□□□ -0.3
ABCD3-203ENST00000464165 KCNA4P22459 653 aa12.78□□□□□ -0.36
ABCD3-203ENST00000464165 EHMT2Q96KQ7 1210 aa12.68□□□□□ -0.38
ABCD3-203ENST00000464165 PIAS4Q8N2W9 510 aaPredicted RBP12.63□□□□□ -0.39
ABCD3-203ENST00000464165 PPP4R3CPQ6ZMV5 832 aa12.34□□□□□ -0.43
ABCD3-203ENST00000464165 SLC4A1APQ9BWU0 796 aaKnown RBP12.12□□□□□ -0.47
ABCD3-203ENST00000464165 CSRNP3Q8WYN3 585 aa12.03□□□□□ -0.48
ABCD3-203ENST00000464165 NPM3O75607 178 aaKnown RBP12.02□□□□□ -0.49
ABCD3-203ENST00000464165 MAPK8IP2Q13387 824 aaPredicted RBP11.94□□□□□ -0.5
ABCD3-203ENST00000464165 NCBP3Q53F19 620 aaKnown RBP11.94□□□□□ -0.5
ABCD3-203ENST00000464165 ZBTB22O15209 634 aa11.79□□□□□ -0.52
ABCD3-203ENST00000464165 CNKSR2Q8WXI2 1034 aa11.74□□□□□ -0.53
ABCD3-203ENST00000464165 MSH5O43196 834 aa11.71□□□□□ -0.54
ABCD3-203ENST00000464165 SCAF1Q9H7N4 1312 aaKnown RBP11.7□□□□□ -0.54
ABCD3-203ENST00000464165 FOXD4L1Q9NU39 408 aa11.38□□□□□ -0.59
ABCD3-203ENST00000464165 RNF216Q9NWF9 866 aaPredicted RBP11.36□□□□□ -0.59
ABCD3-203ENST00000464165 DMRT2Q9Y5R5 561 aa11.28□□□□□ -0.6
ABCD3-203ENST00000464165 SLC4A2P04920 1241 aa11.26□□□□□ -0.61
ABCD3-203ENST00000464165 DCAF8L1A6NGE4 600 aa11.24□□□□□ -0.61
ABCD3-203ENST00000464165 HOXD11P31277 338 aaPredicted RBP11.18□□□□□ -0.62
ABCD3-203ENST00000464165 DNAJC5BQ9UF47 199 aa10.99□□□□□ -0.65
ABCD3-203ENST00000464165 ATF5Q9Y2D1 282 aaPredicted RBP10.93□□□□□ -0.66
ABCD3-203ENST00000464165 MYCNP04198 464 aaPredicted RBP10.93□□□□□ -0.66
ABCD3-203ENST00000464165 FKBP8Q14318 412 aa10.93□□□□□ -0.66
ABCD3-203ENST00000464165 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.91□□□□□ -0.66
ABCD3-203ENST00000464165 NISCHQ9Y2I1 1504 aa10.9□□□□□ -0.66
ABCD3-203ENST00000464165 RTN4Q9NQC3 1192 aaKnown RBP10.86□□□□□ -0.67
ABCD3-203ENST00000464165 U3KPZ7 1027 aaPredicted RBP10.76□□□□□ -0.69
ABCD3-203ENST00000464165 ATXN8OSP0DMR3 200 aa10.67□□□□□ -0.7
ABCD3-203ENST00000464165 SAMD1Q6SPF0 538 aaPredicted RBP10.55□□□□□ -0.72
ABCD3-203ENST00000464165 ABCC9O60706 1549 aa10.52□□□□□ -0.73
ABCD3-203ENST00000464165 TRHP20396 242 aaPredicted RBP10.52□□□□□ -0.73
ABCD3-203ENST00000464165 SPINK5Q9NQ38 1064 aaPredicted RBP10.51□□□□□ -0.73
ABCD3-203ENST00000464165 AMER1Q5JTC6 1135 aaPredicted RBP10.49□□□□□ -0.73
ABCD3-203ENST00000464165 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.49□□□□□ -0.73
ABCD3-203ENST00000464165 HNRNPUL2Q1KMD3 747 aaKnown RBP10.49□□□□□ -0.73
ABCD3-203ENST00000464165 ZNF219Q9P2Y4 722 aaPredicted RBP10.48□□□□□ -0.73
ABCD3-203ENST00000464165 CCDC180Q9P1Z9 1646 aa10.44□□□□□ -0.74
ABCD3-203ENST00000464165 SLC24A1O60721 1099 aa10.43□□□□□ -0.74
ABCD3-203ENST00000464165 CAPN15O75808 1086 aa10.37□□□□□ -0.75
ABCD3-203ENST00000464165 MKRN4PQ13434 485 aaPredicted RBP10.37□□□□□ -0.75
ABCD3-203ENST00000464165 ABCB7O75027 752 aa10.36□□□□□ -0.75
ABCD3-203ENST00000464165 POLA2Q14181 598 aa10.36□□□□□ -0.75
ABCD3-203ENST00000464165 SPDYE4A6NLX3 237 aa10.32□□□□□ -0.76
ABCD3-203ENST00000464165 DNAJC5Q9H3Z4 198 aa10.31□□□□□ -0.76
ABCD3-203ENST00000464165 RNF39Q9H2S5 420 aa10.2□□□□□ -0.78
ABCD3-203ENST00000464165 DCAF8L2P0C7V8 631 aa10.19□□□□□ -0.78
ABCD3-203ENST00000464165 FBLN2P98095 1184 aa10.14□□□□□ -0.79
ABCD3-203ENST00000464165 APLP2Q06481 763 aa10.14□□□□□ -0.79
ABCD3-203ENST00000464165 POTEDQ86YR6 584 aa10.11□□□□□ -0.79
ABCD3-203ENST00000464165 VASPP50552 380 aaPredicted RBP10.1□□□□□ -0.79
ABCD3-203ENST00000464165 RB1CC1Q8TDY2 1594 aa10.1□□□□□ -0.79
ABCD3-203ENST00000464165 IFNLR1Q8IU57 520 aaPredicted RBP10.09□□□□□ -0.79
ABCD3-203ENST00000464165 FBXO3Q9UK99 471 aa10.06□□□□□ -0.8
ABCD3-203ENST00000464165 OSCARQ8IYS5 282 aa10.05□□□□□ -0.8
ABCD3-203ENST00000464165 C1QBPQ07021 282 aaKnown RBP9.99□□□□□ -0.81
ABCD3-203ENST00000464165 KLHL34Q8N239 644 aa9.96□□□□□ -0.82
ABCD3-203ENST00000464165 SHROOM4Q9ULL8 1493 aa9.95□□□□□ -0.82
ABCD3-203ENST00000464165 ZNF692Q9BU19 519 aaPredicted RBP9.95□□□□□ -0.82
ABCD3-203ENST00000464165 DSG3P32926 999 aa9.94□□□□□ -0.82
ABCD3-203ENST00000464165 PROM2Q8N271 834 aa9.94□□□□□ -0.82
ABCD3-203ENST00000464165 NACADO15069 1562 aa9.91□□□□□ -0.82
ABCD3-203ENST00000464165 PKD2Q13563 968 aa9.9□□□□□ -0.82
ABCD3-203ENST00000464165 PABPN1Q86U42 306 aaKnown RBP eCLIP9.89□□□□□ -0.83
ABCD3-203ENST00000464165 PLCD3Q8N3E9 789 aa9.87□□□□□ -0.83
ABCD3-203ENST00000464165 UNC13AQ9UPW8 1703 aa9.85□□□□□ -0.83
ABCD3-203ENST00000464165 HAP1P54257 671 aaPredicted RBP9.85□□□□□ -0.83
ABCD3-203ENST00000464165 PLCB2Q00722 1185 aa9.82□□□□□ -0.84
ABCD3-203ENST00000464165 MIER1Q8N108 512 aa9.82□□□□□ -0.84
ABCD3-203ENST00000464165 ZBTB12Q9Y330 459 aaPredicted RBP9.81□□□□□ -0.84
ABCD3-203ENST00000464165 CUX2O14529 1486 aa9.8□□□□□ -0.84
ABCD3-203ENST00000464165 BICRAQ9NZM4 1560 aa9.77□□□□□ -0.85
ABCD3-203ENST00000464165 ECM2O94769 699 aaPredicted RBP9.76□□□□□ -0.85
ABCD3-203ENST00000464165 CACNB1Q02641 598 aaPredicted RBP9.76□□□□□ -0.85
ABCD3-203ENST00000464165 CIZ1Q9ULV3 898 aaPredicted RBP9.74□□□□□ -0.85
ABCD3-203ENST00000464165 RGL2O15211 777 aa9.73□□□□□ -0.85
ABCD3-203ENST00000464165 MYO15BQ96JP2 1530 aa9.73□□□□□ -0.85
ABCD3-203ENST00000464165 SPDYE2BA6NHP3 402 aa9.71□□□□□ -0.85
ABCD3-203ENST00000464165 SPDYE6P0CI01 402 aa9.71□□□□□ -0.85
ABCD3-203ENST00000464165 SPDYE2Q495Y8 402 aa9.71□□□□□ -0.85
ABCD3-203ENST00000464165 CFAP44Q96MT7 982 aa9.71□□□□□ -0.85
ABCD3-203ENST00000464165 NPM1P06748 294 aaKnown RBP eCLIP9.71□□□□□ -0.86
ABCD3-203ENST00000464165 CECR2Q9BXF3 1484 aa9.71□□□□□ -0.86
ABCD3-203ENST00000464165 CC2D2AQ9P2K1 1620 aa9.71□□□□□ -0.86
ABCD3-203ENST00000464165 SPOCK2Q92563 424 aa9.7□□□□□ -0.86
ABCD3-203ENST00000464165 SSUH2Q9Y2M2 353 aa9.7□□□□□ -0.86
ABCD3-203ENST00000464165 PAXIP1Q6ZW49 1069 aaPredicted RBP9.67□□□□□ -0.86
ABCD3-203ENST00000464165 PRKCSHP14314 528 aaPredicted RBP9.63□□□□□ -0.87
ABCD3-203ENST00000464165 CLEC11AQ9Y240 323 aa9.63□□□□□ -0.87
ABCD3-203ENST00000464165 CHGAP10645 457 aaKnown RBP9.62□□□□□ -0.87
ABCD3-203ENST00000464165 KDM2AQ9Y2K7 1162 aa9.57□□□□□ -0.88
ABCD3-203ENST00000464165 STAG3Q9UJ98 1225 aa9.57□□□□□ -0.88
ABCD3-203ENST00000464165 EIF4G1Q04637 1599 aaKnown RBP9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms