RNA–Protein interactions for RNA: ENST00000546191.5

NEK6-215, Transcript of NIMA related kinase 6, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NEK6, Length 2,580 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK6-215ENST00000546191 NISCHQ9Y2I1 1504 aa20.18■□□□□ 0.82
NEK6-215ENST00000546191 CCDC180Q9P1Z9 1646 aa17.72■□□□□ 0.43
NEK6-215ENST00000546191 PELP1Q8IZL8 1130 aaKnown RBP17.29■□□□□ 0.36
NEK6-215ENST00000546191 ABCC9O60706 1549 aa17.23■□□□□ 0.35
NEK6-215ENST00000546191 ZCCHC6Q5VYS8 1495 aaKnown RBP16.94■□□□□ 0.3
NEK6-215ENST00000546191 MYT1Q01538 1121 aa16.88■□□□□ 0.29
NEK6-215ENST00000546191 DCAF8L2P0C7V8 631 aa16.85■□□□□ 0.29
NEK6-215ENST00000546191 SHROOM4Q9ULL8 1493 aa16.65■□□□□ 0.26
NEK6-215ENST00000546191 DCAF1Q9Y4B6 1507 aa16.6■□□□□ 0.25
NEK6-215ENST00000546191 NACADO15069 1562 aa16.58■□□□□ 0.24
NEK6-215ENST00000546191 RB1CC1Q8TDY2 1594 aa16.55■□□□□ 0.24
NEK6-215ENST00000546191 MYO15BQ96JP2 1530 aa16.51■□□□□ 0.23
NEK6-215ENST00000546191 HRCP23327 699 aa16.5■□□□□ 0.23
NEK6-215ENST00000546191 SCRIBQ14160 1630 aa16.37■□□□□ 0.21
NEK6-215ENST00000546191 UNC13AQ9UPW8 1703 aa16.34■□□□□ 0.21
NEK6-215ENST00000546191 SUPT5HO00267 1087 aaKnown RBP16.27■□□□□ 0.19
NEK6-215ENST00000546191 PABPN1Q86U42 306 aaKnown RBP eCLIP16.2■□□□□ 0.18
NEK6-215ENST00000546191 SCAF1Q9H7N4 1312 aaKnown RBP16.17■□□□□ 0.18
NEK6-215ENST00000546191 BICRAQ9NZM4 1560 aa16.17■□□□□ 0.18
NEK6-215ENST00000546191 PPARGC1BQ86YN6 1023 aaKnown RBP16.15■□□□□ 0.18
NEK6-215ENST00000546191 TTBK1Q5TCY1 1321 aaPredicted RBP16.14■□□□□ 0.17
NEK6-215ENST00000546191 PRKCSHP14314 528 aaPredicted RBP15.92■□□□□ 0.14
NEK6-215ENST00000546191 CHIC1Q5VXU3 224 aa15.88■□□□□ 0.13
NEK6-215ENST00000546191 CECR2Q9BXF3 1484 aa15.81■□□□□ 0.12
NEK6-215ENST00000546191 BCL11AQ9H165 835 aa15.76■□□□□ 0.11
NEK6-215ENST00000546191 RSF1Q96T23 1441 aaPredicted RBP15.75■□□□□ 0.11
NEK6-215ENST00000546191 PCGF6Q9BYE7 350 aa15.69■□□□□ 0.1
NEK6-215ENST00000546191 EIF4G1Q04637 1599 aaKnown RBP15.67■□□□□ 0.1
NEK6-215ENST00000546191 MROH2BQ7Z745 1585 aa15.64■□□□□ 0.09
NEK6-215ENST00000546191 FAM9AQ8IZU1 332 aaPredicted RBP15.62■□□□□ 0.09
NEK6-215ENST00000546191 DNAJC5BQ9UF47 199 aa15.62■□□□□ 0.09
NEK6-215ENST00000546191 SMARCA4P51532 1647 aa15.61■□□□□ 0.09
NEK6-215ENST00000546191 BAZ1AQ9NRL2 1556 aaPredicted RBP15.57■□□□□ 0.08
NEK6-215ENST00000546191 CC2D2AQ9P2K1 1620 aa15.55■□□□□ 0.08
NEK6-215ENST00000546191 WIZO95785 1651 aa15.51■□□□□ 0.07
NEK6-215ENST00000546191 ATAD2BQ9ULI0 1458 aa15.44■□□□□ 0.06
NEK6-215ENST00000546191 ACIN1Q9UKV3 1341 aaKnown RBP15.44■□□□□ 0.06
NEK6-215ENST00000546191 ERICH6Q7L0X2 663 aa15.43■□□□□ 0.06
NEK6-215ENST00000546191 APLP2Q06481 763 aa15.41■□□□□ 0.06
NEK6-215ENST00000546191 PEG3Q9GZU2 1588 aa15.38■□□□□ 0.05
NEK6-215ENST00000546191 CENPBP07199 599 aaPredicted RBP15.37■□□□□ 0.05
NEK6-215ENST00000546191 NEUROD1Q13562 356 aa15.37■□□□□ 0.05
NEK6-215ENST00000546191 GTF3C3Q9Y5Q9 886 aa15.37■□□□□ 0.05
NEK6-215ENST00000546191 SMARCA2P51531 1590 aa15.36■□□□□ 0.05
NEK6-215ENST00000546191 NCAPD3P42695 1498 aa15.32■□□□□ 0.04
NEK6-215ENST00000546191 BAZ1BQ9UIG0 1483 aaKnown RBP15.31■□□□□ 0.04
NEK6-215ENST00000546191 TRIM41Q8WV44 630 aa15.27■□□□□ 0.04
NEK6-215ENST00000546191 HMGXB3Q12766 1538 aa15.27■□□□□ 0.03
NEK6-215ENST00000546191 LOC105371045A0A1W2PR82 267 aa15.27■□□□□ 0.03
NEK6-215ENST00000546191 TOP2AP11388 1531 aaKnown RBP15.25■□□□□ 0.03
NEK6-215ENST00000546191 ZEB1P37275 1124 aaPredicted RBP15.13■□□□□ 0.01
NEK6-215ENST00000546191 CCDC88BA6NC98 1476 aa15.13■□□□□ 0.01
NEK6-215ENST00000546191 ANP32EQ9BTT0 268 aa15.09■□□□□ 0.01
NEK6-215ENST00000546191 NESP48681 1621 aa15.04■□□□□ -0
NEK6-215ENST00000546191 CSRNP3Q8WYN3 585 aa14.99□□□□□ -0.01
NEK6-215ENST00000546191 TRIM26Q12899 539 aaPredicted RBP14.99□□□□□ -0.01
NEK6-215ENST00000546191 ABCC8Q09428 1581 aa14.93□□□□□ -0.02
NEK6-215ENST00000546191 CADPSQ9ULU8 1353 aa14.92□□□□□ -0.02
NEK6-215ENST00000546191 CFTRP13569 1480 aa14.9□□□□□ -0.02
NEK6-215ENST00000546191 EEA1Q15075 1411 aa14.86□□□□□ -0.03
NEK6-215ENST00000546191 LAMC3Q9Y6N6 1575 aa14.86□□□□□ -0.03
NEK6-215ENST00000546191 SLC24A1O60721 1099 aa14.85□□□□□ -0.03
NEK6-215ENST00000546191 KIF21AQ7Z4S6 1674 aa14.83□□□□□ -0.04
NEK6-215ENST00000546191 PRDM2Q13029 1718 aa14.8□□□□□ -0.04
NEK6-215ENST00000546191 WRNQ14191 1432 aaPredicted RBP eCLIP14.79□□□□□ -0.04
NEK6-215ENST00000546191 FANCD2Q9BXW9 1451 aa14.78□□□□□ -0.04
NEK6-215ENST00000546191 SOGA1O94964 1423 aa14.77□□□□□ -0.05
NEK6-215ENST00000546191 ERCC6Q03468 1493 aa14.73□□□□□ -0.05
NEK6-215ENST00000546191 PDS5BQ9NTI5 1447 aa14.73□□□□□ -0.05
NEK6-215ENST00000546191 TNIKQ9UKE5 1360 aa14.73□□□□□ -0.05
NEK6-215ENST00000546191 EHMT2Q96KQ7 1210 aa14.73□□□□□ -0.05
NEK6-215ENST00000546191 SYNJ1O43426 1573 aa14.71□□□□□ -0.06
NEK6-215ENST00000546191 CEP164Q9UPV0 1460 aa14.71□□□□□ -0.06
NEK6-215ENST00000546191 ANO8Q9HCE9 1232 aaPredicted RBP14.7□□□□□ -0.06
NEK6-215ENST00000546191 RUSC2Q8N2Y8 1516 aa14.68□□□□□ -0.06
NEK6-215ENST00000546191 URB2Q14146 1524 aaKnown RBP14.67□□□□□ -0.06
NEK6-215ENST00000546191 CEP162Q5TB80 1403 aa14.66□□□□□ -0.06
NEK6-215ENST00000546191 GOLGA3Q08378 1498 aa14.66□□□□□ -0.06
NEK6-215ENST00000546191 THOC2Q8NI27 1593 aaKnown RBP14.66□□□□□ -0.06
NEK6-215ENST00000546191 DIEXFQ68CQ4 756 aaKnown RBP14.65□□□□□ -0.06
NEK6-215ENST00000546191 CUX1P39880 1505 aa14.64□□□□□ -0.07
NEK6-215ENST00000546191 KIF21BO75037 1637 aa14.63□□□□□ -0.07
NEK6-215ENST00000546191 TOP2BQ02880 1626 aa14.62□□□□□ -0.07
NEK6-215ENST00000546191 MRC2Q9UBG0 1479 aa14.62□□□□□ -0.07
NEK6-215ENST00000546191 TSHZ2Q9NRE2 1034 aa14.61□□□□□ -0.07
NEK6-215ENST00000546191 BIVM-ERCC5R4GMW8 1640 aa14.6□□□□□ -0.07
NEK6-215ENST00000546191 TOPBP1Q92547 1522 aa14.59□□□□□ -0.07
NEK6-215ENST00000546191 WDR62O43379 1518 aa14.57□□□□□ -0.08
NEK6-215ENST00000546191 DNMBPQ6XZF7 1577 aa14.56□□□□□ -0.08
NEK6-215ENST00000546191 YTHDC1Q96MU7 727 aaKnown RBP14.54□□□□□ -0.08
NEK6-215ENST00000546191 UBTFP17480 764 aaKnown RBP14.53□□□□□ -0.08
NEK6-215ENST00000546191 EIF5BO60841 1220 aaKnown RBP14.53□□□□□ -0.08
NEK6-215ENST00000546191 FGD5Q6ZNL6 1462 aa14.52□□□□□ -0.09
NEK6-215ENST00000546191 UBE2Q2Q8WVN8 375 aa14.51□□□□□ -0.09
NEK6-215ENST00000546191 POLA1P09884 1462 aaPredicted RBP14.51□□□□□ -0.09
NEK6-215ENST00000546191 RAD54L2Q9Y4B4 1467 aa14.5□□□□□ -0.09
NEK6-215ENST00000546191 CUX2O14529 1486 aa14.49□□□□□ -0.09
NEK6-215ENST00000546191 ERICH3Q5RHP9 1530 aa14.45□□□□□ -0.1
NEK6-215ENST00000546191 RAPGEF2Q9Y4G8 1499 aa14.45□□□□□ -0.1
NEK6-215ENST00000546191 CLIP1P30622 1438 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms