Protein–RNA interactions for Protein: Q8IZH2

XRN1, 5'-3' exoribonuclease 1, humanhuman

Known RBP Predictions only

Length 1,706 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1Q8IZH2 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC30.45■■■□□ 2.47
XRN1Q8IZH2 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC30.45■■■□□ 2.46
XRN1Q8IZH2 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC30.45■■■□□ 2.46
XRN1Q8IZH2 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC30.44■■■□□ 2.46
XRN1Q8IZH2 PPP1R14BP2-201ENST00000426284 444 ntBASIC30.44■■■□□ 2.46
XRN1Q8IZH2 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC30.44■■■□□ 2.46
XRN1Q8IZH2 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC30.44■■■□□ 2.46
XRN1Q8IZH2 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC30.44■■■□□ 2.46
XRN1Q8IZH2 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC30.44■■■□□ 2.46
XRN1Q8IZH2 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC30.44■■■□□ 2.46
XRN1Q8IZH2 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC30.44■■■□□ 2.46
XRN1Q8IZH2 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC30.44■■■□□ 2.46
XRN1Q8IZH2 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC30.44■■■□□ 2.46
XRN1Q8IZH2 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC30.44■■■□□ 2.46
XRN1Q8IZH2 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC30.44■■■□□ 2.46
XRN1Q8IZH2 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC30.43■■■□□ 2.46
XRN1Q8IZH2 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC30.43■■■□□ 2.46
XRN1Q8IZH2 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC30.43■■■□□ 2.46
XRN1Q8IZH2 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC30.43■■■□□ 2.46
XRN1Q8IZH2 MKRN4P-201ENST00000444706 1521 ntBASIC30.43■■■□□ 2.46
XRN1Q8IZH2 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC30.43■■■□□ 2.46
XRN1Q8IZH2 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC30.43■■■□□ 2.46
XRN1Q8IZH2 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC30.42■■■□□ 2.46
XRN1Q8IZH2 AC092118.2-201ENST00000613495 667 ntBASIC30.42■■■□□ 2.46
XRN1Q8IZH2 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC30.42■■■□□ 2.46
XRN1Q8IZH2 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC30.42■■■□□ 2.46
XRN1Q8IZH2 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
XRN1Q8IZH2 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC30.42■■■□□ 2.46
XRN1Q8IZH2 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC30.42■■■□□ 2.46
XRN1Q8IZH2 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC30.42■■■□□ 2.46
XRN1Q8IZH2 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC30.42■■■□□ 2.46
XRN1Q8IZH2 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC30.42■■■□□ 2.46
XRN1Q8IZH2 MYC-209ENST00000641252 345 ntBASIC30.42■■■□□ 2.46
XRN1Q8IZH2 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC30.41■■■□□ 2.46
XRN1Q8IZH2 PLLP-204ENST00000569059 665 ntTSL 3 BASIC30.41■■■□□ 2.46
XRN1Q8IZH2 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC30.41■■■□□ 2.46
XRN1Q8IZH2 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC30.4■■■□□ 2.46
XRN1Q8IZH2 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC30.4■■■□□ 2.46
XRN1Q8IZH2 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC30.4■■■□□ 2.46
XRN1Q8IZH2 MIPEPP3-201ENST00000412105 444 ntBASIC30.4■■■□□ 2.46
XRN1Q8IZH2 MIR4758-201ENST00000577688 71 ntBASIC30.4■■■□□ 2.46
XRN1Q8IZH2 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC30.4■■■□□ 2.46
XRN1Q8IZH2 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC30.4■■■□□ 2.46
XRN1Q8IZH2 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC30.4■■■□□ 2.46
XRN1Q8IZH2 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC30.4■■■□□ 2.46
XRN1Q8IZH2 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC30.4■■■□□ 2.46
XRN1Q8IZH2 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
XRN1Q8IZH2 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC30.39■■■□□ 2.46
XRN1Q8IZH2 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC30.39■■■□□ 2.46
XRN1Q8IZH2 EEF1DP3-203ENST00000566025 782 ntBASIC30.39■■■□□ 2.46
XRN1Q8IZH2 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.46
XRN1Q8IZH2 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC30.39■■■□□ 2.45
XRN1Q8IZH2 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC30.39■■■□□ 2.45
XRN1Q8IZH2 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC30.39■■■□□ 2.45
XRN1Q8IZH2 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC30.38■■■□□ 2.45
XRN1Q8IZH2 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
XRN1Q8IZH2 AL139125.2-201ENST00000623134 1869 ntBASIC30.38■■■□□ 2.45
XRN1Q8IZH2 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC30.38■■■□□ 2.45
XRN1Q8IZH2 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC30.38■■■□□ 2.45
XRN1Q8IZH2 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC30.38■■■□□ 2.45
XRN1Q8IZH2 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC30.38■■■□□ 2.45
XRN1Q8IZH2 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC30.38■■■□□ 2.45
XRN1Q8IZH2 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC30.37■■■□□ 2.45
XRN1Q8IZH2 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC30.37■■■□□ 2.45
XRN1Q8IZH2 AC093787.1-201ENST00000450396 207 ntBASIC30.37■■■□□ 2.45
XRN1Q8IZH2 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC30.37■■■□□ 2.45
XRN1Q8IZH2 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC30.37■■■□□ 2.45
XRN1Q8IZH2 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC30.37■■■□□ 2.45
XRN1Q8IZH2 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC30.37■■■□□ 2.45
XRN1Q8IZH2 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC30.37■■■□□ 2.45
XRN1Q8IZH2 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC30.37■■■□□ 2.45
XRN1Q8IZH2 BET1L-204ENST00000410108 637 ntTSL 3 BASIC30.36■■■□□ 2.45
XRN1Q8IZH2 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC30.36■■■□□ 2.45
XRN1Q8IZH2 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC30.36■■■□□ 2.45
XRN1Q8IZH2 AC016405.3-201ENST00000607710 860 ntBASIC30.36■■■□□ 2.45
XRN1Q8IZH2 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC30.36■■■□□ 2.45
XRN1Q8IZH2 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
XRN1Q8IZH2 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
XRN1Q8IZH2 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC30.36■■■□□ 2.45
XRN1Q8IZH2 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC30.36■■■□□ 2.45
XRN1Q8IZH2 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
XRN1Q8IZH2 NAA20-201ENST00000310450 920 ntTSL 2 BASIC30.36■■■□□ 2.45
XRN1Q8IZH2 GCSHP5-201ENST00000443090 522 ntBASIC30.36■■■□□ 2.45
XRN1Q8IZH2 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC30.36■■■□□ 2.45
XRN1Q8IZH2 AC004812.2-201ENST00000611079 2094 ntBASIC30.35■■■□□ 2.45
XRN1Q8IZH2 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
XRN1Q8IZH2 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
XRN1Q8IZH2 KRT18P29-201ENST00000397031 1267 ntBASIC30.35■■■□□ 2.45
XRN1Q8IZH2 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC30.35■■■□□ 2.45
XRN1Q8IZH2 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC30.35■■■□□ 2.45
XRN1Q8IZH2 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC30.35■■■□□ 2.45
XRN1Q8IZH2 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC30.35■■■□□ 2.45
XRN1Q8IZH2 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
XRN1Q8IZH2 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC30.34■■■□□ 2.45
XRN1Q8IZH2 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
XRN1Q8IZH2 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC30.34■■■□□ 2.45
XRN1Q8IZH2 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC30.34■■■□□ 2.45
XRN1Q8IZH2 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC30.34■■■□□ 2.45
XRN1Q8IZH2 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC30.34■■■□□ 2.45
XRN1Q8IZH2 ADM-205ENST00000528544 586 ntTSL 2 BASIC30.34■■■□□ 2.45
Retrieved 100 of 98,524 protein–RNA pairs in 58 ms