Protein–RNA interactions for Protein: Q5VT25

CDC42BPA, Serine/threonine-protein kinase MRCK alpha, humanhuman

Predictions only

Length 1,732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPAQ5VT25 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC33.18■■■□□ 2.9
CDC42BPAQ5VT25 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC33.18■■■□□ 2.9
CDC42BPAQ5VT25 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC33.18■■■□□ 2.9
CDC42BPAQ5VT25 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC33.18■■■□□ 2.9
CDC42BPAQ5VT25 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC33.17■■■□□ 2.9
CDC42BPAQ5VT25 APTR-203ENST00000430801 583 ntTSL 5 BASIC33.17■■■□□ 2.9
CDC42BPAQ5VT25 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC33.17■■■□□ 2.9
CDC42BPAQ5VT25 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC33.17■■■□□ 2.9
CDC42BPAQ5VT25 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC33.17■■■□□ 2.9
CDC42BPAQ5VT25 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC33.17■■■□□ 2.9
CDC42BPAQ5VT25 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC33.17■■■□□ 2.9
CDC42BPAQ5VT25 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC33.17■■■□□ 2.9
CDC42BPAQ5VT25 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC33.16■■■□□ 2.9
CDC42BPAQ5VT25 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC33.16■■■□□ 2.9
CDC42BPAQ5VT25 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC33.16■■■□□ 2.9
CDC42BPAQ5VT25 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC33.16■■■□□ 2.9
CDC42BPAQ5VT25 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC33.16■■■□□ 2.9
CDC42BPAQ5VT25 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC33.16■■■□□ 2.9
CDC42BPAQ5VT25 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC33.16■■■□□ 2.9
CDC42BPAQ5VT25 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC33.16■■■□□ 2.9
CDC42BPAQ5VT25 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC33.16■■■□□ 2.9
CDC42BPAQ5VT25 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC33.15■■■□□ 2.9
CDC42BPAQ5VT25 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC33.15■■■□□ 2.9
CDC42BPAQ5VT25 KLF13-207ENST00000560473 489 ntTSL 3 BASIC33.15■■■□□ 2.9
CDC42BPAQ5VT25 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC33.15■■■□□ 2.9
CDC42BPAQ5VT25 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC33.15■■■□□ 2.9
CDC42BPAQ5VT25 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC33.14■■■□□ 2.9
CDC42BPAQ5VT25 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC33.14■■■□□ 2.9
CDC42BPAQ5VT25 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC33.14■■■□□ 2.9
CDC42BPAQ5VT25 SLC29A4P1-201ENST00000398760 971 ntBASIC33.14■■■□□ 2.9
CDC42BPAQ5VT25 AC083906.2-201ENST00000511578 360 ntBASIC33.14■■■□□ 2.9
CDC42BPAQ5VT25 AP001160.3-201ENST00000601484 763 ntBASIC33.14■■■□□ 2.9
CDC42BPAQ5VT25 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC33.14■■■□□ 2.9
CDC42BPAQ5VT25 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC33.14■■■□□ 2.9
CDC42BPAQ5VT25 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC33.14■■■□□ 2.9
CDC42BPAQ5VT25 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC33.14■■■□□ 2.89
CDC42BPAQ5VT25 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC33.14■■■□□ 2.89
CDC42BPAQ5VT25 KRT18P20-201ENST00000548986 1279 ntBASIC33.14■■■□□ 2.89
CDC42BPAQ5VT25 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC33.14■■■□□ 2.89
CDC42BPAQ5VT25 AC010536.3-201ENST00000620306 533 ntBASIC33.14■■■□□ 2.89
CDC42BPAQ5VT25 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC33.14■■■□□ 2.89
CDC42BPAQ5VT25 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC33.13■■■□□ 2.89
CDC42BPAQ5VT25 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC33.13■■■□□ 2.89
CDC42BPAQ5VT25 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC33.13■■■□□ 2.89
CDC42BPAQ5VT25 ANOS2P-203ENST00000472227 1816 ntBASIC33.13■■■□□ 2.89
CDC42BPAQ5VT25 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC33.13■■■□□ 2.89
CDC42BPAQ5VT25 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC33.12■■■□□ 2.89
CDC42BPAQ5VT25 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC33.12■■■□□ 2.89
CDC42BPAQ5VT25 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC33.12■■■□□ 2.89
CDC42BPAQ5VT25 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC33.12■■■□□ 2.89
CDC42BPAQ5VT25 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC33.12■■■□□ 2.89
CDC42BPAQ5VT25 TSPY20P-201ENST00000450910 630 ntBASIC33.11■■■□□ 2.89
CDC42BPAQ5VT25 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC33.11■■■□□ 2.89
CDC42BPAQ5VT25 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC33.11■■■□□ 2.89
CDC42BPAQ5VT25 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC33.11■■■□□ 2.89
CDC42BPAQ5VT25 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC33.11■■■□□ 2.89
CDC42BPAQ5VT25 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC33.11■■■□□ 2.89
CDC42BPAQ5VT25 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC33.11■■■□□ 2.89
CDC42BPAQ5VT25 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC33.11■■■□□ 2.89
CDC42BPAQ5VT25 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC33.11■■■□□ 2.89
CDC42BPAQ5VT25 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC33.11■■■□□ 2.89
CDC42BPAQ5VT25 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC33.1■■■□□ 2.89
CDC42BPAQ5VT25 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC33.1■■■□□ 2.89
CDC42BPAQ5VT25 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC33.1■■■□□ 2.89
CDC42BPAQ5VT25 AF201337.1-201ENST00000520239 748 ntBASIC33.1■■■□□ 2.89
CDC42BPAQ5VT25 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC33.09■■■□□ 2.89
CDC42BPAQ5VT25 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC33.09■■■□□ 2.89
CDC42BPAQ5VT25 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC33.09■■■□□ 2.89
CDC42BPAQ5VT25 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC33.09■■■□□ 2.89
CDC42BPAQ5VT25 AP006587.3-201ENST00000525742 1516 ntBASIC33.09■■■□□ 2.89
CDC42BPAQ5VT25 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC33.08■■■□□ 2.89
CDC42BPAQ5VT25 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC33.08■■■□□ 2.89
CDC42BPAQ5VT25 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC33.08■■■□□ 2.89
CDC42BPAQ5VT25 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC33.08■■■□□ 2.89
CDC42BPAQ5VT25 AC079089.2-201ENST00000531211 1277 ntBASIC33.08■■■□□ 2.89
CDC42BPAQ5VT25 EEF1DP3-203ENST00000566025 782 ntBASIC33.08■■■□□ 2.89
CDC42BPAQ5VT25 AC066615.1-201ENST00000640911 628 ntBASIC33.08■■■□□ 2.89
CDC42BPAQ5VT25 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC33.08■■■□□ 2.89
CDC42BPAQ5VT25 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC33.08■■■□□ 2.89
CDC42BPAQ5VT25 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC33.08■■■□□ 2.89
CDC42BPAQ5VT25 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC33.08■■■□□ 2.89
CDC42BPAQ5VT25 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC33.08■■■□□ 2.89
CDC42BPAQ5VT25 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC33.08■■■□□ 2.89
CDC42BPAQ5VT25 AC133552.2-202ENST00000575694 574 ntBASIC33.08■■■□□ 2.89
CDC42BPAQ5VT25 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC33.08■■■□□ 2.89
CDC42BPAQ5VT25 MARS-234ENST00000630571 216 ntTSL 5 BASIC33.08■■■□□ 2.89
CDC42BPAQ5VT25 MARS-235ENST00000630803 183 ntTSL 3 BASIC33.08■■■□□ 2.89
CDC42BPAQ5VT25 TMEM191A-211ENST00000637163 1067 ntBASIC33.08■■■□□ 2.89
CDC42BPAQ5VT25 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC33.07■■■□□ 2.89
CDC42BPAQ5VT25 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC33.07■■■□□ 2.89
CDC42BPAQ5VT25 AP004607.7-201ENST00000527152 1677 ntBASIC33.07■■■□□ 2.88
CDC42BPAQ5VT25 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC33.07■■■□□ 2.88
CDC42BPAQ5VT25 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC33.07■■■□□ 2.88
CDC42BPAQ5VT25 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC33.07■■■□□ 2.88
CDC42BPAQ5VT25 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC33.07■■■□□ 2.88
CDC42BPAQ5VT25 AC013268.1-206ENST00000638368 961 ntBASIC33.07■■■□□ 2.88
CDC42BPAQ5VT25 AC112229.1-201ENST00000639295 961 ntBASIC33.07■■■□□ 2.88
CDC42BPAQ5VT25 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC33.07■■■□□ 2.88
CDC42BPAQ5VT25 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC33.06■■■□□ 2.88
CDC42BPAQ5VT25 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC33.06■■■□□ 2.88
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms